-
1
-
-
0024218965
-
The evolution of lenticular proteins: The β- and γ-crystallin super gene family
-
Lubsen, N. H., Aarts, H. J., and Schoenmakers, J. G. (1988) The evolution of lenticular proteins: the β- and γ-crystallin super gene family, Prog. Biophys. Mol. Biol. 51, 47-76.
-
(1988)
Prog. Biophys. Mol. Biol
, vol.51
, pp. 47-76
-
-
Lubsen, N.H.1
Aarts, H.J.2
Schoenmakers, J.G.3
-
2
-
-
0025117557
-
Evolution of a protein superfamily: Relationships between vertebrate lens crystalline and microorganism dormancy proteins
-
Wistow, G. (1990) Evolution of a protein superfamily: relationships between vertebrate lens crystalline and microorganism dormancy proteins, J. Mol. Evol. 30, 140-145.
-
(1990)
J. Mol. Evol
, vol.30
, pp. 140-145
-
-
Wistow, G.1
-
3
-
-
0035167113
-
Lens crystalline and their microbial homologs: Structure, stability, and function
-
Jaenicke, R., and Slingsby, C. (2001) Lens crystalline and their microbial homologs: structure, stability, and function, Crit. Rev. Biochem. Mol. Biol. 36, 435-499.
-
(2001)
Crit. Rev. Biochem. Mol. Biol
, vol.36
, pp. 435-499
-
-
Jaenicke, R.1
Slingsby, C.2
-
4
-
-
0035914434
-
Calcium binding properties of γ-crystallin: Calcium ion binds at the Greek key beta gamma-crystallin fold
-
Rajini, B., Shridas, P., Sundari, C. S., Muralidhar, D., Chandani, S., Thomas, F., and Sharma, Y. (2001) Calcium binding properties of γ-crystallin: calcium ion binds at the Greek key beta gamma-crystallin fold, J. Biol. Chem. 276, 38464-38471.
-
(2001)
J. Biol. Chem
, vol.276
, pp. 38464-38471
-
-
Rajini, B.1
Shridas, P.2
Sundari, C.S.3
Muralidhar, D.4
Chandani, S.5
Thomas, F.6
Sharma, Y.7
-
5
-
-
0344921403
-
Stability, homodimerization, and calcium-binding properties of a single, variant βγ-crystallin domain of the protein absent in melanoma 1 (AIM1)
-
Rajini, B., Graham, C., Wistow, G., and Sharma, Y. (2003) Stability, homodimerization, and calcium-binding properties of a single, variant βγ-crystallin domain of the protein absent in melanoma 1 (AIM1), Biochemistry 42, 4552-4559.
-
(2003)
Biochemistry
, vol.42
, pp. 4552-4559
-
-
Rajini, B.1
Graham, C.2
Wistow, G.3
Sharma, Y.4
-
6
-
-
12544258453
-
Calcium-binding crystalline from Yersinia pestis. Characterization of two single βγ-crystallin domains of a putative exported protein
-
Jobby, M. K., and Sharma, Y. (2005) Calcium-binding crystalline from Yersinia pestis. Characterization of two single βγ-crystallin domains of a putative exported protein, J. Biol. Chem. 280, 1209-1216.
-
(2005)
J. Biol. Chem
, vol.280
, pp. 1209-1216
-
-
Jobby, M.K.1
Sharma, Y.2
-
7
-
-
34250362688
-
2+-binding protein of the βγ-crystallin superfamily from Methanosarcina acetivorans
-
2+-binding protein of the βγ-crystallin superfamily from Methanosarcina acetivorans, J. Biomol. NMR 36 (Suppl 1), 32.
-
(2006)
J. Biomol. NMR
, vol.36
, Issue.SUPPL. 1
, pp. 32
-
-
Barnwal, R.P.1
Jobby, M.K.2
Sharma, Y.3
Chary, K.V.4
-
8
-
-
0035095351
-
Crystal structure of the calcium-loaded spherulin 3a dimer sheds light on the evolution of the eye lens βγ-crystallin domain fold
-
Clout, N. J., Kretschmar, M., Jaenicke, R., and Slingsby, C. (2001) Crystal structure of the calcium-loaded spherulin 3a dimer sheds light on the evolution of the eye lens βγ-crystallin domain fold, Structure (Cambridge, MA, USA) 9, 115-124.
-
(2001)
Structure (Cambridge, MA, USA)
, vol.9
, pp. 115-124
-
-
Clout, N.J.1
Kretschmar, M.2
Jaenicke, R.3
Slingsby, C.4
-
9
-
-
24944510397
-
Urochordate βγ-crystallin and the evolutionary origin of the vertebrate eye lens
-
Shimeld, S. M., Purkiss, A. G., Dirks, R. P., Bateman, O. A., Slingsby, C., and Lubsen, N. H. (2005) Urochordate βγ-crystallin and the evolutionary origin of the vertebrate eye lens, Curr. Biol. 15, 1684-1689.
-
(2005)
Curr. Biol
, vol.15
, pp. 1684-1689
-
-
Shimeld, S.M.1
Purkiss, A.G.2
Dirks, R.P.3
Bateman, O.A.4
Slingsby, C.5
Lubsen, N.H.6
-
10
-
-
0019485220
-
The molecular structure and stability of the eye lens: X-ray analysis of gamma-crystallin II
-
Blundell, T., Lindley, P., Miller, L., Moss, D., Slingsby, C., Tickle, I., Turnell, B., and Wistow, G. (1981) The molecular structure and stability of the eye lens: x-ray analysis of gamma-crystallin II, Nature 289, 771-777.
-
(1981)
Nature
, vol.289
, pp. 771-777
-
-
Blundell, T.1
Lindley, P.2
Miller, L.3
Moss, D.4
Slingsby, C.5
Tickle, I.6
Turnell, B.7
Wistow, G.8
-
11
-
-
0031006549
-
AIM1, a novel non-lens member of the βγ-crystallin superfamily, is associated with the control of tumorigenicity in human malignant melanoma
-
Ray, M. E., Wistow, G., Su, Y. A., Meltzer, P. S., and Trent, J. M. (1997) AIM1, a novel non-lens member of the βγ-crystallin superfamily, is associated with the control of tumorigenicity in human malignant melanoma, Proc. Natl. Acad. Sci. U.S.A. 94, 3229-3234.
-
(1997)
Proc. Natl. Acad. Sci. U.S.A
, vol.94
, pp. 3229-3234
-
-
Ray, M.E.1
Wistow, G.2
Su, Y.A.3
Meltzer, P.S.4
Trent, J.M.5
-
12
-
-
0029078916
-
The control of asymmetric gene expression during Caulobacter cell differentiation
-
Marczynski, G. T., and Shapiro, L. (1995) The control of asymmetric gene expression during Caulobacter cell differentiation, Arch. Microbiol. 163, 313-321.
-
(1995)
Arch. Microbiol
, vol.163
, pp. 313-321
-
-
Marczynski, G.T.1
Shapiro, L.2
-
13
-
-
0036900453
-
The Caulobacter cell cycle: Timing, spatial organization and checkpoints
-
Jenal, U., and Stephens, C. (2002) The Caulobacter cell cycle: timing, spatial organization and checkpoints, Curr. Opin. Microbiol. 5, 558-563.
-
(2002)
Curr. Opin. Microbiol
, vol.5
, pp. 558-563
-
-
Jenal, U.1
Stephens, C.2
-
14
-
-
0030753235
-
Factors controlling in vitro recrystallization of the Caulobacter crescentus paracrystalline S-layer
-
Nomellini, J. F., Kupcu, S., Sleytr, U. B., and Smit, J. (1997) Factors controlling in vitro recrystallization of the Caulobacter crescentus paracrystalline S-layer, J. Bacteriol. 179, 6349-6354.
-
(1997)
J. Bacteriol
, vol.179
, pp. 6349-6354
-
-
Nomellini, J.F.1
Kupcu, S.2
Sleytr, U.B.3
Smit, J.4
-
15
-
-
0021212836
-
The role of calcium in stalk development and in phosphate acquisition in Caulobacter crescentus
-
Poindexter, J. S. (1984) The role of calcium in stalk development and in phosphate acquisition in Caulobacter crescentus, Arch. Microbiol. 138, 140-152.
-
(1984)
Arch. Microbiol
, vol.138
, pp. 140-152
-
-
Poindexter, J.S.1
-
16
-
-
0035957330
-
-
Nierman, W. C., Feldblyum, T. V., Laub, M. T., Paulsen, I. T., Nelson, K. E., Eisen, J. A., Heidelberg, J. F., Alley, M. R., Ohta, N., Maddock, J. R., Potocka, I., Nelson, W. C., Newton, A., Stephens, C., Phadke, N. D., Ely, B., DeBoy, R. T., Dodson, R. J., Durkin, A. S., Gwinn, M. L., Haft, D. H., Kolonay, J. F., Smit, J., Craven, M. B., Khouri, H., Shetty, J., Berry, K., Utterback, T., Tran, K., Wolf, A., Vamathevan, J., Ermolaeva, M., White, O., Salzberg, S. L., Venter, J. C., Shapiro, L., Fraser, C. M., and Eisen, J. (2001) Complete genome sequence of Caulobacter crescentus, Proc. Natl. Acad. Sci. U.S.A. 98, 4136-4141.
-
Nierman, W. C., Feldblyum, T. V., Laub, M. T., Paulsen, I. T., Nelson, K. E., Eisen, J. A., Heidelberg, J. F., Alley, M. R., Ohta, N., Maddock, J. R., Potocka, I., Nelson, W. C., Newton, A., Stephens, C., Phadke, N. D., Ely, B., DeBoy, R. T., Dodson, R. J., Durkin, A. S., Gwinn, M. L., Haft, D. H., Kolonay, J. F., Smit, J., Craven, M. B., Khouri, H., Shetty, J., Berry, K., Utterback, T., Tran, K., Wolf, A., Vamathevan, J., Ermolaeva, M., White, O., Salzberg, S. L., Venter, J. C., Shapiro, L., Fraser, C. M., and Eisen, J. (2001) Complete genome sequence of Caulobacter crescentus, Proc. Natl. Acad. Sci. U.S.A. 98, 4136-4141.
-
-
-
-
17
-
-
0025183708
-
Basic local alignment search tool
-
Altschul, S. F., Gish, W., Miller, W., Myers, E. W., and Lipman, D. J. (1990) Basic local alignment search tool, J. Mol. Biol. 215, 403-410.
-
(1990)
J. Mol. Biol
, vol.215
, pp. 403-410
-
-
Altschul, S.F.1
Gish, W.2
Miller, W.3
Myers, E.W.4
Lipman, D.J.5
-
18
-
-
33746728138
-
Purification of a crystallin domain of Yersinia crystallin from inclusion bodies and its comparison to native protein from the soluble fraction
-
Jobby, M. K., and Sharma, Y. (2006) Purification of a crystallin domain of Yersinia crystallin from inclusion bodies and its comparison to native protein from the soluble fraction, Biomed. Chromatogr. 20, 956-963.
-
(2006)
Biomed. Chromatogr
, vol.20
, pp. 956-963
-
-
Jobby, M.K.1
Sharma, Y.2
-
19
-
-
0021379023
-
45Ca autoradiography on nitrocellulose membrane after sodium dodecyl sulfate gel electrophoresis
-
45Ca autoradiography on nitrocellulose membrane after sodium dodecyl sulfate gel electrophoresis, J. Biochem. (Tokyo) 95, 511-519.
-
(1984)
J. Biochem. (Tokyo)
, vol.95
, pp. 511-519
-
-
Maruyama, K.1
Mikawa, T.2
Ebashi, S.3
-
20
-
-
0026530383
-
Quantitative analysis of protein far UV circular dichroism spectra by neural networks
-
Bohm, G., Muhr, R., and Jaenicke, R. (1992) Quantitative analysis of protein far UV circular dichroism spectra by neural networks, Protein Eng. 5, 191-195.
-
(1992)
Protein Eng
, vol.5
, pp. 191-195
-
-
Bohm, G.1
Muhr, R.2
Jaenicke, R.3
-
21
-
-
0020617086
-
X-ray analysis of the eye lens protein gamma-II crystallin at 1.9 A resolution
-
Wistow, G., Turnell, B., Summers, L., Slingsby, C., Moss, D., Miller, L., Lindley, P., and Blundell, T. (1983) X-ray analysis of the eye lens protein gamma-II crystallin at 1.9 A resolution, J. Mol. Biol. 170, 175-202.
-
(1983)
J. Mol. Biol
, vol.170
, pp. 175-202
-
-
Wistow, G.1
Turnell, B.2
Summers, L.3
Slingsby, C.4
Moss, D.5
Miller, L.6
Lindley, P.7
Blundell, T.8
-
22
-
-
0029400304
-
A non-lens member of the beta gamma-crystallin superfamily in a vertebrate, the amphibian
-
Wistow, G., Jaworski, C., and Rao, P. V. (1995) A non-lens member of the beta gamma-crystallin superfamily in a vertebrate, the amphibian Cynops, Exp. Eye Res. 61, 637-639.
-
(1995)
Cynops, Exp. Eye Res
, vol.61
, pp. 637-639
-
-
Wistow, G.1
Jaworski, C.2
Rao, P.V.3
-
23
-
-
0028568291
-
The tyrosine corner: A feature of most Greek key β-barrel proteins
-
Hemmingsen, J. M., Gernert, K. M., Richardson, J. S., and Richardson, D. C. (1994) The tyrosine corner: a feature of most Greek key β-barrel proteins, Protein Sci. 3, 1927-1937.
-
(1994)
Protein Sci
, vol.3
, pp. 1927-1937
-
-
Hemmingsen, J.M.1
Gernert, K.M.2
Richardson, J.S.3
Richardson, D.C.4
-
24
-
-
0034695407
-
Conservation of folding and stability within a protein family: The tyrosine corner as an evolutionary cul-de-sac
-
Hamill, S. J., Cota, E., Chothia, C., and Clarke, J. (2000) Conservation of folding and stability within a protein family: the tyrosine corner as an evolutionary cul-de-sac, J. Mol. Biol. 295, 641-649.
-
(2000)
J. Mol. Biol
, vol.295
, pp. 641-649
-
-
Hamill, S.J.1
Cota, E.2
Chothia, C.3
Clarke, J.4
-
25
-
-
34547729698
-
Calcium-binding to lens βB2- and βA3-crystallins suggests that all β-crystallins are calcium-binding proteins
-
Jobby, M. K., and Sharma, Y. (2007) Calcium-binding to lens βB2- and βA3-crystallins suggests that all β-crystallins are calcium-binding proteins, FEBS J. 274, 4135-4147.
-
(2007)
FEBS J
, vol.274
, pp. 4135-4147
-
-
Jobby, M.K.1
Sharma, Y.2
-
26
-
-
0024347551
-
Calcium ion binding to δ- and to β-crystallins. The presence of the "EF-hand" motif in δ-crystallin that aids in calcium ion binding
-
Sharma, Y., Rao, C. M., Narasu, M. L., Rao, S. C., Somasundaram, T., Gopalakrishna, A., and Balasubramanian, D. (1989) Calcium ion binding to δ- and to β-crystallins. The presence of the "EF-hand" motif in δ-crystallin that aids in calcium ion binding, J. Biol. Chem. 264, 12794-12799.
-
(1989)
J. Biol. Chem
, vol.264
, pp. 12794-12799
-
-
Sharma, Y.1
Rao, C.M.2
Narasu, M.L.3
Rao, S.C.4
Somasundaram, T.5
Gopalakrishna, A.6
Balasubramanian, D.7
-
27
-
-
0029921691
-
Calcium-binding properties of beta-crystallins
-
Sharma, Y., and Balasubramanian, D. (1996) Calcium-binding properties of beta-crystallins, Ophthalmic Res. 28 (Suppl. 1), 44-47.
-
(1996)
Ophthalmic Res
, vol.28
, Issue.SUPPL. 1
, pp. 44-47
-
-
Sharma, Y.1
Balasubramanian, D.2
-
28
-
-
0029588668
-
Identification of metal-binding sites in rat brain calcium-binding protein
-
Veenstra, T. D., Gross, M. D., Hunziker, W., and Kumar, R. (1995) Identification of metal-binding sites in rat brain calcium-binding protein, J. Biol. Chem. 270, 30353-30358.
-
(1995)
J. Biol. Chem
, vol.270
, pp. 30353-30358
-
-
Veenstra, T.D.1
Gross, M.D.2
Hunziker, W.3
Kumar, R.4
-
29
-
-
0027525244
-
Luminescence spectroscopy
-
Horrocks, W. D. Jr. (1993) Luminescence spectroscopy, Methods Enzymol. 226, 495-538.
-
(1993)
Methods Enzymol
, vol.226
, pp. 495-538
-
-
Horrocks Jr., W.D.1
-
30
-
-
0023840608
-
Characterization of calcium-binding sites in development-specific protein S of Myxococcus xanthus using site-specific mutagenesis
-
Teintze, M., Inouye, M., and Inouye, S. (1988) Characterization of calcium-binding sites in development-specific protein S of Myxococcus xanthus using site-specific mutagenesis, J. Biol. Chem. 263, 1199-1203,
-
(1988)
J. Biol. Chem
, vol.263
, pp. 1199-1203
-
-
Teintze, M.1
Inouye, M.2
Inouye, S.3
-
31
-
-
0028171466
-
Dimerization of beta B2-crystallin: The role of the linker peptide and the N-and C-terminal extensions
-
Trinkl, S., Glockshuber, R., and Jaenicke, R. (1994) Dimerization of beta B2-crystallin: the role of the linker peptide and the N-and C-terminal extensions, Protein Sci. 3, 1392-1400.
-
(1994)
Protein Sci
, vol.3
, pp. 1392-1400
-
-
Trinkl, S.1
Glockshuber, R.2
Jaenicke, R.3
-
32
-
-
0030893023
-
Size of human lens β-crystallin aggregates are distinguished by N-terminal truncation of betaB1
-
Ajaz, M. S., Ma, Z., Smith, D. L., and Smith, J. B. (1997) Size of human lens β-crystallin aggregates are distinguished by N-terminal truncation of betaB1, J. Biol. Chem. 272, 11250-11255.
-
(1997)
J. Biol. Chem
, vol.272
, pp. 11250-11255
-
-
Ajaz, M.S.1
Ma, Z.2
Smith, D.L.3
Smith, J.B.4
-
33
-
-
0036153571
-
What does it mean to be natively unfolded?
-
Uversky, V. N. (2002) What does it mean to be natively unfolded? Eur. J. Biochem. 269, 2-12.
-
(2002)
Eur. J. Biochem
, vol.269
, pp. 2-12
-
-
Uversky, V.N.1
-
34
-
-
0031282930
-
Association properties of βB2- and βA3-crystallin: Ability to form dimers
-
Hejtmancik, J. F., Wingfield, P. T., Chambers, C., Russell, P., Chen, H. C., Sergeev, Y. V., and Hope, J. N. (1997) Association properties of βB2- and βA3-crystallin: ability to form dimers, Protein Eng. 10, 1347-1352.
-
(1997)
Protein Eng
, vol.10
, pp. 1347-1352
-
-
Hejtmancik, J.F.1
Wingfield, P.T.2
Chambers, C.3
Russell, P.4
Chen, H.C.5
Sergeev, Y.V.6
Hope, J.N.7
-
35
-
-
34547727423
-
Domain-domain interaction and calcium-binding properties of a typical single βγ-crystallin domain of the protein Absent in Melanoma 1 (AIM1)
-
Rajini, B., and Sharma, Y. (2006) Domain-domain interaction and calcium-binding properties of a typical single βγ-crystallin domain of the protein Absent in Melanoma 1 (AIM1), Calcium Binding Proteins 1, 96-101.
-
(2006)
Calcium Binding Proteins
, vol.1
, pp. 96-101
-
-
Rajini, B.1
Sharma, Y.2
-
36
-
-
0000826487
-
Biochemical applications of differential scanning calorimetry
-
Sturtevant, J. M. (1987) Biochemical applications of differential scanning calorimetry, Annu. Rev. Phys. Chem. 38, 463-488.
-
(1987)
Annu. Rev. Phys. Chem
, vol.38
, pp. 463-488
-
-
Sturtevant, J.M.1
-
37
-
-
33646549337
-
Calorimetric analysis of thermodynamic stability and aggregation for apo and holo amyotrophic lateral sclerosis-associated Gly-93 mutants of superoxide dismutase
-
Stathopulos, P. B., Rumfeldt, J. A., Karbassi, F., Siddall, C. A., Lepock, J. R., and Meiering, E. M. (2006) Calorimetric analysis of thermodynamic stability and aggregation for apo and holo amyotrophic lateral sclerosis-associated Gly-93 mutants of superoxide dismutase, J. Biol. Chem. 281, 6184-6193.
-
(2006)
J. Biol. Chem
, vol.281
, pp. 6184-6193
-
-
Stathopulos, P.B.1
Rumfeldt, J.A.2
Karbassi, F.3
Siddall, C.A.4
Lepock, J.R.5
Meiering, E.M.6
-
38
-
-
0033548423
-
The domains of protein S from Myxococcus xanthus: Structure, stability and interactions
-
Wenk, M., Baumgartner, R., Holak, T. A., Huber, R., Jaenicke, R., and Mayr, E. M. (1999) The domains of protein S from Myxococcus xanthus: structure, stability and interactions, J. Mol. Biol. 286, 1533-1545.
-
(1999)
J. Mol. Biol
, vol.286
, pp. 1533-1545
-
-
Wenk, M.1
Baumgartner, R.2
Holak, T.A.3
Huber, R.4
Jaenicke, R.5
Mayr, E.M.6
-
39
-
-
33747866099
-
DISULFIND: A disulfide bonding state and cysteine connectivity prediction server
-
Ceroni, A., Passerini, A., Vullo, A., and Frasconi, P. (2006) DISULFIND: a disulfide bonding state and cysteine connectivity prediction server, Nucleic Acids Res. 34, W177-W181.
-
(2006)
Nucleic Acids Res
, vol.34
-
-
Ceroni, A.1
Passerini, A.2
Vullo, A.3
Frasconi, P.4
-
40
-
-
0030610919
-
2+-loaded spherulin 3a from Physarum polycephalum adopts the prototype gamma-crystallin fold in aqueous solution
-
2+-loaded spherulin 3a from Physarum polycephalum adopts the prototype gamma-crystallin fold in aqueous solution, J. Mol. Biol. 271, 645-655.
-
(1997)
J. Mol. Biol
, vol.271
, pp. 645-655
-
-
Rosinke, B.1
Renner, C.2
Mayr, E.M.3
Jaenicke, R.4
Holak, T.A.5
-
41
-
-
0024297354
-
Multiple sequence alignment with hierarchical clustering
-
Corpet, F. (1988) Multiple sequence alignment with hierarchical clustering, Nucleic Acids Res. 16, 10881-10890.
-
(1988)
Nucleic Acids Res
, vol.16
, pp. 10881-10890
-
-
Corpet, F.1
|