메뉴 건너뛰기




Volumn 369, Issue 1, 2007, Pages 191-197

The complete nucleotide sequence of a New World simian foamy virus

Author keywords

Foamy viruses; New World monkeys; Primate evolution; Retrovirus; Spider monkey virus

Indexed keywords

AMINO ACID SEQUENCE; ARTICLE; MOLECULAR CLONING; NONHUMAN; NUCLEOTIDE SEQUENCE; PHYLOGENY; PLATYRRHINI; PRIORITY JOURNAL; SPUMA VIRUS; VIRUS TRANSMISSION;

EID: 35648944805     PISSN: 00426822     EISSN: 10960341     Source Type: Journal    
DOI: 10.1016/j.virol.2007.07.018     Document Type: Article
Times cited : (31)

References (61)
  • 1
    • 35648948433 scopus 로고    scopus 로고
    • Anonymous, 2007. Going to the pot-the neotropical bushmeat crisis and its impact on primate populations.
  • 2
    • 0029909644 scopus 로고    scopus 로고
    • Characterization of the spliced pol transcript of feline foamy virus: the splice acceptor site of the pol transcript is located in gag of foamy viruses
    • Bodem J., Löchelt M., Winkler I., Flower R.P., Delius H., and Flügel R.M. Characterization of the spliced pol transcript of feline foamy virus: the splice acceptor site of the pol transcript is located in gag of foamy viruses. J. Virol. 70 (1996) 9024-9027
    • (1996) J. Virol. , vol.70 , pp. 9024-9027
    • Bodem, J.1    Löchelt, M.2    Winkler, I.3    Flower, R.P.4    Delius, H.5    Flügel, R.M.6
  • 3
    • 0032506102 scopus 로고    scopus 로고
    • Nuclear localization of the functional Bel 1 transactivator but not of the gag proteins of the feline foamy virus
    • Bodem J., Zemba M., and Flügel R.M. Nuclear localization of the functional Bel 1 transactivator but not of the gag proteins of the feline foamy virus. Virology 251 (1998) 22-27
    • (1998) Virology , vol.251 , pp. 22-27
    • Bodem, J.1    Zemba, M.2    Flügel, R.M.3
  • 4
    • 2642526847 scopus 로고    scopus 로고
    • Characterization of the polymerase and RNase H activities of human foamy virus reverse transcriptase
    • Boyer P.L., Stenbak C.R., Clark P.K., Linial M.L., and Hughes S.H. Characterization of the polymerase and RNase H activities of human foamy virus reverse transcriptase. J. Virol. 78 (2004) 6112-6121
    • (2004) J. Virol. , vol.78 , pp. 6112-6121
    • Boyer, P.L.1    Stenbak, C.R.2    Clark, P.K.3    Linial, M.L.4    Hughes, S.H.5
  • 5
    • 35648969624 scopus 로고    scopus 로고
    • Boyer, P.L., Stenbak, C., Hoberman, D., Linial, M., Hughes, S.H., 2007. Fidelity of the prototype primate foamy virus (PFV) RT compared to HIV-1 RT.
  • 7
    • 0035086114 scopus 로고    scopus 로고
    • Palindromic sequence plays a critical role in human foamy virus dimerization
    • Cain D., Erlwein O., Grigg A., Russell R.A., and McClure M.O. Palindromic sequence plays a critical role in human foamy virus dimerization. J. Virol. 75 (2001) 3731-3739
    • (2001) J. Virol. , vol.75 , pp. 3731-3739
    • Cain, D.1    Erlwein, O.2    Grigg, A.3    Russell, R.A.4    McClure, M.O.5
  • 9
    • 31144469701 scopus 로고    scopus 로고
    • Role and mechanism of action of the APOBEC3 family of antiretroviral resistance factors
    • Cullen B.R. Role and mechanism of action of the APOBEC3 family of antiretroviral resistance factors. J. Virol. 80 (2006) 1067-1076
    • (2006) J. Virol. , vol.80 , pp. 1067-1076
    • Cullen, B.R.1
  • 11
    • 10044265648 scopus 로고    scopus 로고
    • Prototype foamy virus envelope glycoprotein leader peptide processing is mediated by furin-like cellular protease, but cleavage is not essential for viral infectivity
    • Duda A., Stange A., Luftenegger D., Stanke N., Westphal D., Pietschmann T., Eastman S.W., Linial M., Rethwilm A., and Lindemann D. Prototype foamy virus envelope glycoprotein leader peptide processing is mediated by furin-like cellular protease, but cleavage is not essential for viral infectivity. J. Virol. 78 (2004) 13865-13870
    • (2004) J. Virol. , vol.78 , pp. 13865-13870
    • Duda, A.1    Stange, A.2    Luftenegger, D.3    Stanke, N.4    Westphal, D.5    Pietschmann, T.6    Eastman, S.W.7    Linial, M.8    Rethwilm, A.9    Lindemann, D.10
  • 12
    • 0034947737 scopus 로고    scopus 로고
    • Identification of a conserved residue of foamy virus Gag required for intracellular capsid assembly
    • Eastman S.W., and Linial M.L. Identification of a conserved residue of foamy virus Gag required for intracellular capsid assembly. J. Virol. 75 (2001) 6857-6864
    • (2001) J. Virol. , vol.75 , pp. 6857-6864
    • Eastman, S.W.1    Linial, M.L.2
  • 13
    • 0031550767 scopus 로고    scopus 로고
    • Identification of sites that act together to direct dimerization of human foamy virus RNA in vitro
    • Erlwein O., Cain D., Fischer N., Rethwilm A., and McClure M.O. Identification of sites that act together to direct dimerization of human foamy virus RNA in vitro. Virology 229 (1997) 251-258
    • (1997) Virology , vol.229 , pp. 251-258
    • Erlwein, O.1    Cain, D.2    Fischer, N.3    Rethwilm, A.4    McClure, M.O.5
  • 14
    • 0038586451 scopus 로고    scopus 로고
    • Proteolytic processing of foamy virus Gag and Pol proteins
    • Flügel R.M., and Pfrepper K.I. Proteolytic processing of foamy virus Gag and Pol proteins. Curr. Top. Microbiol. Immunol. 277 (2003) 63-88
    • (2003) Curr. Top. Microbiol. Immunol. , vol.277 , pp. 63-88
    • Flügel, R.M.1    Pfrepper, K.I.2
  • 15
    • 1642289565 scopus 로고    scopus 로고
    • HIV-1 and the host cell: an intimate association
    • Freed E.O. HIV-1 and the host cell: an intimate association. Trends Microbiol. 12 (2004) 170-177
    • (2004) Trends Microbiol. , vol.12 , pp. 170-177
    • Freed, E.O.1
  • 16
    • 0038678627 scopus 로고    scopus 로고
    • Features of the Env leader protein and the N-terminal Gag domain of feline foamy virus important for virus morphogenesis
    • Geiselhart V., Schwantes A., Bastone P., Frech M., and Löchelt M. Features of the Env leader protein and the N-terminal Gag domain of feline foamy virus important for virus morphogenesis. Virology 310 (2003) 235-244
    • (2003) Virology , vol.310 , pp. 235-244
    • Geiselhart, V.1    Schwantes, A.2    Bastone, P.3    Frech, M.4    Löchelt, M.5
  • 17
    • 10044260072 scopus 로고    scopus 로고
    • Furin-mediated cleavage of the feline foamy virus Env leader protein
    • Geiselhart V., Bastone P., Kempf T., Schnölzer M., and Löchelt M. Furin-mediated cleavage of the feline foamy virus Env leader protein. J. Virol. 78 (2004) 13573-13581
    • (2004) J. Virol. , vol.78 , pp. 13573-13581
    • Geiselhart, V.1    Bastone, P.2    Kempf, T.3    Schnölzer, M.4    Löchelt, M.5
  • 18
    • 0029652078 scopus 로고
    • Identification of an ER retrieval signal in a retroviral glycoprotein
    • Goepfert P.A., Wang G., and Mulligan M.J. Identification of an ER retrieval signal in a retroviral glycoprotein. Cell 82 (1995) 543-544
    • (1995) Cell , vol.82 , pp. 543-544
    • Goepfert, P.A.1    Wang, G.2    Mulligan, M.J.3
  • 19
    • 0027401479 scopus 로고
    • Functional organization of the Bel-1 transactivator of human foamy virus
    • He F., Sun J.D., Garrett E.D., and Cullen B.R. Functional organization of the Bel-1 transactivator of human foamy virus. J. Virol. 67 (1993) 1896-1904
    • (1993) J. Virol. , vol.67 , pp. 1896-1904
    • He, F.1    Sun, J.D.2    Garrett, E.D.3    Cullen, B.R.4
  • 22
    • 0028360748 scopus 로고
    • Isolation, cloning, and sequencing of simian foamy viruses from chimpanzees (SFVcpz): high homology to human foamy virus (HFV)
    • Herchenröder O., Renne R., Loncar D., Cobb E.K., Murthy K.K., Schneider J., Mergia A., and Luciw P.A. Isolation, cloning, and sequencing of simian foamy viruses from chimpanzees (SFVcpz): high homology to human foamy virus (HFV). Virology 201 (1994) 187-199
    • (1994) Virology , vol.201 , pp. 187-199
    • Herchenröder, O.1    Renne, R.2    Loncar, D.3    Cobb, E.K.4    Murthy, K.K.5    Schneider, J.6    Mergia, A.7    Luciw, P.A.8
  • 23
    • 0031912085 scopus 로고    scopus 로고
    • The nucleotide sequence and spliced pol mRNA levels of the nonprimate spumavirus bovine foamy virus
    • Holzschu D.L., Delaney M.A., Renshaw R.W., and Casey J.W. The nucleotide sequence and spliced pol mRNA levels of the nonprimate spumavirus bovine foamy virus. J. Virol. 72 (1998) 2177-2182
    • (1998) J. Virol. , vol.72 , pp. 2177-2182
    • Holzschu, D.L.1    Delaney, M.A.2    Renshaw, R.W.3    Casey, J.W.4
  • 27
    • 34547726099 scopus 로고    scopus 로고
    • Foamy viruses
    • Kniepe D.M., and Howley P.M. (Eds), Lippincot Williams & Wilkins, Philadelphia
    • Linial M. Foamy viruses. In: Kniepe D.M., and Howley P.M. (Eds). Fields Virology. 5th Ed. vol. 2 (2007), Lippincot Williams & Wilkins, Philadelphia 2245-2262
    • (2007) Fields Virology. 5th Ed. , vol.2 , pp. 2245-2262
    • Linial, M.1
  • 29
    • 0027297102 scopus 로고
    • Human foamy virus genome possesses an internal, Bel-1-dependent and functional promoter
    • Löchelt M., Muranyi W., and Flügel R.M. Human foamy virus genome possesses an internal, Bel-1-dependent and functional promoter. Proc. Natl. Acad. Sci. U. S. A. 90 (1993) 7317-7321
    • (1993) Proc. Natl. Acad. Sci. U. S. A. , vol.90 , pp. 7317-7321
    • Löchelt, M.1    Muranyi, W.2    Flügel, R.M.3
  • 31
    • 33947415278 scopus 로고    scopus 로고
    • Correct capsid assembly mediated by a conserved YXXLGL motif in prototype foamy virus gag is essential for infectivity and reverse transcription of the viral genome
    • Mannigel I., Stange A., Zentgraf H., and Lindemann D. Correct capsid assembly mediated by a conserved YXXLGL motif in prototype foamy virus gag is essential for infectivity and reverse transcription of the viral genome. J. Virol. 81 (2007) 3317-3326
    • (2007) J. Virol. , vol.81 , pp. 3317-3326
    • Mannigel, I.1    Stange, A.2    Zentgraf, H.3    Lindemann, D.4
  • 32
    • 0023874836 scopus 로고
    • Analysis of the primary structure of the long terminal repeat and the gag and pol genes of the human spumaretrovirus
    • Maurer B., Bannert H., Darai G., and Flügel R.M. Analysis of the primary structure of the long terminal repeat and the gag and pol genes of the human spumaretrovirus. J. Virol. 62 (1988) 1590-1597
    • (1988) J. Virol. , vol.62 , pp. 1590-1597
    • Maurer, B.1    Bannert, H.2    Darai, G.3    Flügel, R.M.4
  • 34
    • 33745963002 scopus 로고    scopus 로고
    • Foamy virus infection in primates
    • Murray S.M., and Linial M.L. Foamy virus infection in primates. J. Med. Primatol. 35 (2006) 225-235
    • (2006) J. Med. Primatol. , vol.35 , pp. 225-235
    • Murray, S.M.1    Linial, M.L.2
  • 35
    • 18144371606 scopus 로고    scopus 로고
    • Identification of domains in gag important for prototypic foamy virus egress
    • Patton G.S., Morris S.A., Chung W., Bieniasz P.D., and McClure M.O. Identification of domains in gag important for prototypic foamy virus egress. J. Virol. 79 (2005) 6392-6399
    • (2005) J. Virol. , vol.79 , pp. 6392-6399
    • Patton, G.S.1    Morris, S.A.2    Chung, W.3    Bieniasz, P.D.4    McClure, M.O.5
  • 37
    • 0029028538 scopus 로고
    • Regulation of foamy virus gene expression
    • Rethwilm A. Regulation of foamy virus gene expression. Curr. Top. Microbiol. Immunol. 193 (1995) 1-24
    • (1995) Curr. Top. Microbiol. Immunol. , vol.193 , pp. 1-24
    • Rethwilm, A.1
  • 38
    • 0037572249 scopus 로고    scopus 로고
    • The replication strategy of foamy viruses
    • Rethwilm A. The replication strategy of foamy viruses. Curr. Top. Microbiol. Immunol. 277 (2003) 1-26
    • (2003) Curr. Top. Microbiol. Immunol. , vol.277 , pp. 1-26
    • Rethwilm, A.1
  • 40
    • 34547807068 scopus 로고    scopus 로고
    • Foamy virus vectors: an awaited alternative to gamma retro-viral and lentiviral vectors
    • Rethwilm A. Foamy virus vectors: an awaited alternative to gamma retro-viral and lentiviral vectors. Curr. Gene Ther. 7 (2007) 261-271
    • (2007) Curr. Gene Ther. , vol.7 , pp. 261-271
    • Rethwilm, A.1
  • 41
    • 0023514945 scopus 로고
    • Molecular cloning of the genome of human spumaretrovirus
    • Rethwilm A., Darai G., Rosen A., Maurer B., and Flügel R.M. Molecular cloning of the genome of human spumaretrovirus. Gene 59 (1987) 19-28
    • (1987) Gene , vol.59 , pp. 19-28
    • Rethwilm, A.1    Darai, G.2    Rosen, A.3    Maurer, B.4    Flügel, R.M.5
  • 42
    • 0034201441 scopus 로고    scopus 로고
    • EMBOSS: the European Molecular Biology Open Software Suite
    • Rice P., Longden I., and Bleasby A. EMBOSS: the European Molecular Biology Open Software Suite. Trends Genet. 16 (2000) 276-277
    • (2000) Trends Genet. , vol.16 , pp. 276-277
    • Rice, P.1    Longden, I.2    Bleasby, A.3
  • 44
    • 21644460676 scopus 로고    scopus 로고
    • Foamy virus Bet proteins function as novel inhibitors of the APOBEC3 family of innate antretroviral defense factors
    • Russell R.A., Wiegand H.L., Moore M.D., Schafer A., McClure M.O., and Cullen B.R. Foamy virus Bet proteins function as novel inhibitors of the APOBEC3 family of innate antretroviral defense factors. J. Virol. 79 (2005) 8724-8731
    • (2005) J. Virol. , vol.79 , pp. 8724-8731
    • Russell, R.A.1    Wiegand, H.L.2    Moore, M.D.3    Schafer, A.4    McClure, M.O.5    Cullen, B.R.6
  • 45
    • 0028338650 scopus 로고
    • Nuclear localization of foamy virus Gag precursor protein
    • Schliephake A.W., and Rethwilm A. Nuclear localization of foamy virus Gag precursor protein. J. Virol. 68 (1994) 4946-4954
    • (1994) J. Virol. , vol.68 , pp. 4946-4954
    • Schliephake, A.W.1    Rethwilm, A.2
  • 46
    • 3343008856 scopus 로고    scopus 로고
    • Timing the origin of New World monkeys
    • Schrago C.G., and Russo C.A. Timing the origin of New World monkeys. Mol. Biol. Evol. 20 (2003) 1620-1625
    • (2003) Mol. Biol. Evol. , vol.20 , pp. 1620-1625
    • Schrago, C.G.1    Russo, C.A.2
  • 47
    • 0028909753 scopus 로고
    • Phylogenetic analysis of primate foamy viruses by comparison of pol sequences
    • Schweizer M., and Neumann-Haefelin D. Phylogenetic analysis of primate foamy viruses by comparison of pol sequences. Virology 207 (1995) 577-582
    • (1995) Virology , vol.207 , pp. 577-582
    • Schweizer, M.1    Neumann-Haefelin, D.2
  • 50
    • 0029836454 scopus 로고    scopus 로고
    • Quartet puzzling: a quartet maximum likelihood method for reconstructing tree topologies
    • Strimmer K., and von Haeseler A. Quartet puzzling: a quartet maximum likelihood method for reconstructing tree topologies. Mol. Biol. Evol. 13 (1996) 964-969
    • (1996) Mol. Biol. Evol. , vol.13 , pp. 964-969
    • Strimmer, K.1    von Haeseler, A.2
  • 51
    • 0001118596 scopus 로고    scopus 로고
    • Synthesis, assembly, and processing of viral proteins
    • Coffin J.M., Hughes S.H., and Varmus H.E. (Eds), Cold Spring Harbour Labratory Press, Plainview, N.Y.
    • Swanstrom R., and Wills J.W. Synthesis, assembly, and processing of viral proteins. In: Coffin J.M., Hughes S.H., and Varmus H.E. (Eds). Retroviruses (1997), Cold Spring Harbour Labratory Press, Plainview, N.Y. 263-334
    • (1997) Retroviruses , pp. 263-334
    • Swanstrom, R.1    Wills, J.W.2
  • 54
    • 0026065411 scopus 로고
    • Further characterization of the gapped DNA intermediates of human spumavirus: evidence for a dual initiation of plus-strand DNA synthesis
    • Tobaly-Tapiero J., Kupiec J.J., Santillana-Hayat M., Canivet M., Peries J., and Emanoil-Ravier R. Further characterization of the gapped DNA intermediates of human spumavirus: evidence for a dual initiation of plus-strand DNA synthesis. J. Gen. Virol. 72 (1991) 605-608
    • (1991) J. Gen. Virol. , vol.72 , pp. 605-608
    • Tobaly-Tapiero, J.1    Kupiec, J.J.2    Santillana-Hayat, M.3    Canivet, M.4    Peries, J.5    Emanoil-Ravier, R.6
  • 57
    • 0034864546 scopus 로고    scopus 로고
    • Specific interaction of a novel foamy virus Env leader protein with the N-terminal Gag domain
    • Wilk T., Geiselhart V., Frech M., Fuller S.D., Flügel R.M., and Löchelt M. Specific interaction of a novel foamy virus Env leader protein with the N-terminal Gag domain. J. Virol. 75 (2001) 7995-8007
    • (2001) J. Virol. , vol.75 , pp. 7995-8007
    • Wilk, T.1    Geiselhart, V.2    Frech, M.3    Fuller, S.D.4    Flügel, R.M.5    Löchelt, M.6
  • 58
    • 33644828207 scopus 로고    scopus 로고
    • Bushmeat hunting, deforestation, and prediction of zoonoses emergence
    • Wolfe N.D., Daszak P., Kilpatrick A.M., and Burke D.S. Bushmeat hunting, deforestation, and prediction of zoonoses emergence. Emerg. Infect. Dis. 11 (2005) 1822-1827
    • (2005) Emerg. Infect. Dis. , vol.11 , pp. 1822-1827
    • Wolfe, N.D.1    Daszak, P.2    Kilpatrick, A.M.3    Burke, D.S.4
  • 59
    • 0029864543 scopus 로고    scopus 로고
    • The carboxyl terminus of the human foamy virus Gag protein contains separable nucleic acid binding and nuclear transport domains
    • Yu S.F., Edelmann K., Strong R.K., Moebes A., Rethwilm A., and Linial M.L. The carboxyl terminus of the human foamy virus Gag protein contains separable nucleic acid binding and nuclear transport domains. J. Virol. 70 (1996) 8255-8262
    • (1996) J. Virol. , vol.70 , pp. 8255-8262
    • Yu, S.F.1    Edelmann, K.2    Strong, R.K.3    Moebes, A.4    Rethwilm, A.5    Linial, M.L.6
  • 60
    • 0032932713 scopus 로고    scopus 로고
    • Evidence that the human foamy virus genome is DNA
    • Yu S.F., Sullivan M.D., and Linial M.L. Evidence that the human foamy virus genome is DNA. J. Virol. 73 (1999) 1565-1572
    • (1999) J. Virol. , vol.73 , pp. 1565-1572
    • Yu, S.F.1    Sullivan, M.D.2    Linial, M.L.3
  • 61
    • 0032551378 scopus 로고    scopus 로고
    • The carboxy-terminal p3Gag domain of the human foamy virus Gag precursor is required for efficient virus infectivity
    • Zemba M., Wilk T., Rutten T., Wagner A., Flügel R.M., and Löchelt M. The carboxy-terminal p3Gag domain of the human foamy virus Gag precursor is required for efficient virus infectivity. Virology 247 (1998) 7-13
    • (1998) Virology , vol.247 , pp. 7-13
    • Zemba, M.1    Wilk, T.2    Rutten, T.3    Wagner, A.4    Flügel, R.M.5    Löchelt, M.6


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.