Development of a sensitive and rapid nucleic acid assay with tetraphenyl porphyrinatoiron chloride by a resonance light scattering technique

Luminescence

Volumn 22, Issue 5, 2007, Pages 493-500

  Chen, Zhanguang ^a   Liu, Jinbin ^a   Zhu, Li ^a   Ding, Weifeng ^a   Han, Yali ^a  

^a SHANTOU UNIVERSITY   (China)

Author keywords

Bioassay; DNA; Resonance light scattering; Tetraphenyl porphyrinatoiron chloride; Yeast RNA

Indexed keywords

BIOASSAY; BIOMOLECULES; CHLORINE COMPOUNDS; FISH; METAL IONS; RNA; THYMUS; YEAST;

CALF THYMUS; LIGHT SCATTERING TECHNIQUES; LIGHT-SCATTERING INTENSITY; NANOGRAMS; NOVEL METHODS; NUCLEIC ACID ASSAYS; OPTIMUM CONDITIONS; RESONANCE LIGHT SCATTERING; TETRAPHENYL PORPHYRINATOIRON CHLORIDE; YEAST RNA;

DNA;

EID: 35548990140     PISSN: 15227235     EISSN: 15227243     Source Type: Journal    
DOI: 10.1002/bio.991     Document Type: Article

References (40)

1. Skidmore WD, Duggan EL. Simultaneous spectral determination of both base composition and concentration of DNA. Anal. Biochem. 1966; 14: 223-236.
2. Schy WE, Plewa MJ. Use of the diaminobenzoic acid fluorescence assay in conjunction with UV absorbance as a means of quantifying and ascertaining the purity of a DNA preparation. Anal. Biochem. 1989; 180: 314-318.
3. Gendimenico GJ, Bouquin PL, Tramposch KM. Diphenylamine-colorimetric method for DNA assay: a shortened procedure by incubating samples at 50°C. Anal. Biochem. 1988; 173: 45-48.
4. Gold DV, Shochat D. A rapid colorimetric assay for the estimation of microgram quantities of DNA. Anal. Biochem. 1980; 105: 121-125.
5. Peters DL, Dahmus ME. A method of DNA quantitation for localization of DNA in metrizamide gradients. Anal. Biochem 1979; 93: 306-311.
6. Le Pecq JB, Paoletti C. A new fluorometric method for RNA and DNA determination. Anal. Biochem. 1966; 17: 100-107.
7. Rago R, Mitchen J, Wilding G. DNA fluorometric assay in 96-well tissue culture plates using Hoechst 33258 after cell lysis by freezing in distilled water. Anal Biochem. 1990; 191: 31-34.
8. Kapuscinski J, Skoczylas B. Simple and rapid fluorimetric method for DNA microassay. Anal. Biochem. 1977; 83: 252-257.
9. Castro A, Fairfield FR, Shera EB. Fluorescence detection and size measurement of single DNA molecules. Anal. Chem. 1993; 65: 849-852.
10. Topal MD, Fresco JR. Fluorescence of terbium ion-nucleic acid complexes: a sensitive specific probe for unpaired residues in nucleic acids. Biochemistry 1980; 19: 5531-5537.
11. 3+-tetracycline complex. Anal. Chem. 1995; 67: 1785-1788.
12. Huang, CZ, Li KA, Tong SY. Fluorescent complexes of nucleic acids/8-hydroxyquinoline/lanthanum (III) and the fluorometry of nucleic acids. Anal. Lett. 1996; 29: 1705-1717.
13. Pasternack RF, Bustamante C, Colling PJ, Giannetto A, Gibbs EJ, Porphyrin assemblies on DNA as studied by a resonance light-scattering technique. J. Am. Chem. Soc. 1993; 115: 5393-5399.
14. Pasternack RF, Schaefer KF, Hambright P. Resonance light-scattering studies of porphyrin diacid aggregates. Inorg. Chem. 1994; 33: 2062-2065.
15. Pasternack RF, Collings PJ. Resonance light scattering: a new technique for studying chromophore aggregation. Science 1995; 269: 935-939.
16. Huang CZ, Li KA, Tong SY. Determination of nucleic acids by a resonance light-scattering technique with α,β,γ,δ-tetrakis[4- (trimethylammoniumyl)phenyl] porphine. Anal. Chem. 1996; 68: 2259-2263.
17. Huang CZ, Li KA, Tong SY. Determination of nanograms of nucleic acids by their enhancement effect on the resonance light scattering of the cobalt(II)/4-[(5-chloro-2-pyridyl)azo]-1,3-diaminobenzene complex. Anal. Chem. 1997; 69: 514-520.
18. Chen ZG, Zhang TY, Ren FL, Zhu L. Resonance light scattering spectroscopy study of interaction between norfloxacin and calf thymus DNA and its analytical application. Spectrochim. Acta A 2006; 65: 919-924.
19. Chen ZG, Ding WF, Ren FL, Liu JB, Liang YZ. A simple and sensitive assay of nucleic acids based on the enhanced resonance light scattering of zwitterionics. Anal. Chim. Acta 2005; 550: 204-209.
20. Chen ZG, Liu JB, Liang YZ. Use of sodium lauroyl sarcosinate in a high-sensitivity protein assay by resonance light scattering technique. J. Biomol. Screen. 2006; 11: 400-406.
21. Chen ZG, Zhang TY, Ren FL, Ding WF. Determination of proteins at nanogram levels based on their resonance light scattering decrease effect on dibromo-o-nitrophenylfluorone-sodium lauroylglutamate. Microchim. Acta 2006; 153: 65-71.
22. Chen ZG, Ding WF, Ren FL, Liu JB, Han YL. Resonance light scattering technique for determination of proteins with ammonium molybdate. Can. J. Anal. Sci. Spect. 2005; 50: 54-59.
23. Wu X, Sun SN, Guo CY, Yang JH, Sun CX, Zhou CR, Wu T. Resonance light scattering technique for the determination of proteins with Congo red and Triton X-100. Luminescence 2006; 21: 56-61.
24. Wang F, Yang JH, Wu X, Wang XB, Guo CY, Jia Z. Improvement of the acridine orange-protein-surfactant system for protein estimation based on aromatic ring stacking effect of sodium dodecyl benzene sulphonate. Luminescence 2006; 21: 186-194.
25. Chen ZG, Liu JB, Han YL, Zhu L. A novel histidine assay using tetraphenylporphyrin manganese (III) chloride as a molecular recognition probe by resonance light scattering technique. Anal. Chim. Acta 2006; 570: 109-115.
26. Li ZP, Li KA, Tong SY. Determination for micro amounts of nucleic acids by a resonance light scattering technique with dequalinium chloride. Talanta 2001; 55: 669-675.
27. Liu RT, Yang JH, Wu X, Sun CX, Wu T. Interaction of morincetyltrimethylammonium bromide with nucleic acids and determination of nucleic acids at nanograms per milliliter levels based on the enhancement of preresonance light scattering. Analyst 2001; 126: 1367-1371.
28. Li YF, Huang CZ, Li M. Study of the interaction of azur B with DNA and the determination of DNA based on resonance light scattering measurements. Anal. Chim. Acta 2002; 452: 285-294.
29. Li ZP, Li YK, Wang YC. Study of the interaction of hexa-amine cobalt(III) ion with DNA by a resonance light scattering technique and its analytical application. Luminescence 2005; 20: 282-286.
30. Wu X, Yang JH, Sun SN, Guo CY, Ran DH, Zheng JH. Determination of nucleic acids based on the quenching effect on resonance light scattering of the Y(III)-1,6-bi(1′-phenyl-3′-methyl-5′-pyrazolone-4′-) hexane-dione system. Luminescence 2006; 21: 129-134.
31. Feil S, Winkler M, Sulzer P, Ptasinska S, Denifl S, Zappa F, Krãutler B, Mark TD, Scheier P. Single, double and triple ionization of tetraphenyl iron(III) porphyrin chloride. Int. J. Mass. Spectrom. 2006; 255: 232-238.
32. An WT, Guo XL, Shuang SM, Dong C. Effect of microscopic environment on the self-stacking binding of porphyrin to DNA. J. Photochem. Photobiol. A Chem. 2005; 173: 36-41.
33. Rothemund P, Mcnotti AR. Porphyrin studies. V. The metal complex salts of α,β,γ,δ-tetraphenylporphine. J. Am. Chem. Soc. 1948; 70: 1808-1812.
34. Rehmann JP, Barton JK. Proton NMR studies of tris(phenanthroline) metal complexes bound to oligonucleotides: characterization of binding modes. Biochemistry 1990; 29: 1701-1709.
35. Rehmann JP, Barton JK. Proton NMR studies of tris(phenanthroline) metal complexes bound to oligonucleotides: structural characterizations via selective paramagnetic relaxation. Biochemistry 1990; 29: 1710-1717.
36. Jain RK, Sarracino DA, Richert C. A tetraphenylporphyrinpeptide hybrid with high affinity for single-stranded DNA. Chem. Commun. 1998; 3: 423-424.
37. David PR, Courtney PM, Robert LB, Kenneth JB. Thermodynamic characterization of daunomycin-DNA interactions: microcalorimetric measurements of daunomycin-DNA binding enthalpies. Biochemistry 1991; 30: 9799-9809.
38. Kagemoto A, Kunihiro A, Baba Y. Thermodynamic studies on interactions between DNA and dye. Thermochim. Acta 1994; 242: 65-75.
39. Ji LN, Huang JW, Mo TH, An Introduction to Bioinorganic Chemistry. Zhongshan University Press: Guangzhou, 2001; 58-60.
40. Peng YX, Zhu WH, Chen JH. Experimental Biochemistry. The People's Education Press: Beijing, 1989; 79-80.