메뉴 건너뛰기




Volumn 10, Issue 8, 2004, Pages 1357-1362

Genomic-scale analysis of bacterial gene and protein expression in the host

Author keywords

[No Author keywords available]

Indexed keywords

BACTERIAL GENE; BACTERIAL VIRULENCE; DNA MICROARRAY; DRUG DESIGN; ENERGY METABOLISM; IMMUNE SYSTEM; NONHUMAN; PATHOGENESIS; PROTEIN EXPRESSION; PROTEOMICS; REVIEW;

EID: 3543047988     PISSN: 10806040     EISSN: None     Source Type: Journal    
DOI: 10.3201/eid1008.031036     Document Type: Review
Times cited : (34)

References (42)
  • 2
    • 0036893359 scopus 로고    scopus 로고
    • In vivo expression technology
    • Angelichio MJ, Camilli A. In vivo expression technology. Infect Immun. 2002;70:6518-23.
    • (2002) Infect Immun , vol.70 , pp. 6518-6523
    • Angelichio, M.J.1    Camilli, A.2
  • 3
    • 0035010085 scopus 로고    scopus 로고
    • Pasteurella multocida gene expression in response to iron limitation
    • Paustian ML, May BJ, Kapur V. Pasteurella multocida gene expression in response to iron limitation. Infect Immun. 2001;69:4109-15.
    • (2001) Infect Immun , vol.69 , pp. 4109-4115
    • Paustian, M.L.1    May, B.J.2    Kapur, V.3
  • 4
    • 0042466180 scopus 로고    scopus 로고
    • Microarray analysis of the genome-wide response to iron deficiency and iron reconstitution in the cyanobacterium Synechocystis sp. PCC 6803
    • Singh AK, McIntyre LM, Sherman LA. Microarray analysis of the genome-wide response to iron deficiency and iron reconstitution in the cyanobacterium Synechocystis sp. PCC 6803. Plant Physiol. 2003;132:1825-39.
    • (2003) Plant Physiol , vol.132 , pp. 1825-1839
    • Singh, A.K.1    McIntyre, L.M.2    Sherman, L.A.3
  • 5
    • 0036279924 scopus 로고    scopus 로고
    • Transcriptional response of Pasteurella multocida to nutrient limitation
    • Paustian ML, May BJ, Kapur V. Transcriptional response of Pasteurella multocida to nutrient limitation. J Bacteriol. 2002;184:3734-9.
    • (2002) J Bacteriol , vol.184 , pp. 3734-3739
    • Paustian, M.L.1    May, B.J.2    Kapur, V.3
  • 6
    • 0036270739 scopus 로고    scopus 로고
    • Evaluation of a nutrient starvation model of Mycobacterium tuberculosis persistence by gene and protein expression profiling
    • Betts JC, Lukey PT, Robb LC, McAdam RA, Duncan K. Evaluation of a nutrient starvation model of Mycobacterium tuberculosis persistence by gene and protein expression profiling. Mol Microbiol. 2002;43:717-31.
    • (2002) Mol Microbiol , vol.43 , pp. 717-731
    • Betts, J.C.1    Lukey, P.T.2    Robb, L.C.3    McAdam, R.A.4    Duncan, K.5
  • 8
    • 0037066717 scopus 로고    scopus 로고
    • Global expression profiling of acetate-grown Escherichia coli
    • Oh MK, Rohlin L, Kao KC, Liao JC. Global expression profiling of acetate-grown Escherichia coli. J Biol Chem. 2002;277:13175-83.
    • (2002) J Biol Chem , vol.277 , pp. 13175-13183
    • Oh, M.K.1    Rohlin, L.2    Kao, K.C.3    Liao, J.C.4
  • 10
    • 0033891425 scopus 로고    scopus 로고
    • Global gene expression profiles of Bacillus subtilis grown under anaerobic conditions
    • Ye RW, Tao W, Bedzyk L, Young T, Chen M, Li L. Global gene expression profiles of Bacillus subtilis grown under anaerobic conditions. J Bacteriol. 2000;182:4458-65.
    • (2000) J Bacteriol , vol.182 , pp. 4458-4465
    • Ye, R.W.1    Tao, W.2    Bedzyk, L.3    Young, T.4    Chen, M.5    Li, L.6
  • 11
    • 0037384574 scopus 로고    scopus 로고
    • Global gene expression in Escherichia coli biofilms
    • Schembri MA, Kjaergaard K, Klemm P. Global gene expression in Escherichia coli biofilms. Mol Microbiol. 2003;48:253-67.
    • (2003) Mol Microbiol , vol.48 , pp. 253-267
    • Schembri, M.A.1    Kjaergaard, K.2    Klemm, P.3
  • 13
    • 0036033707 scopus 로고    scopus 로고
    • Transcriptome analysis of all two-component regulatory system mutants of Escherichia coli K-12
    • Oshima T, Aiba H, Masuda Y, Kanaya S, Sugiura M, Wanner BL, et al. Transcriptome analysis of all two-component regulatory system mutants of Escherichia coli K-12. Mol Microbiol. 2002;46:281-91.
    • (2002) Mol Microbiol , vol.46 , pp. 281-291
    • Oshima, T.1    Aiba, H.2    Masuda, Y.3    Kanaya, S.4    Sugiura, M.5    Wanner, B.L.6
  • 14
    • 0037022354 scopus 로고    scopus 로고
    • DNA microarray analysis of differential gene expression in Borrelia burgdorferi, the Lyme disease spirochete
    • Revel AT, Talaat AM, Norgard MV. DNA microarray analysis of differential gene expression in Borrelia burgdorferi, the Lyme disease spirochete, Proc Natl Acad Sci U S A. 2002;99:1562-7.
    • (2002) Proc Natl Acad Sci U S A , vol.99 , pp. 1562-1567
    • Revel, A.T.1    Talaat, A.M.2    Norgard, M.V.3
  • 15
    • 0038104769 scopus 로고    scopus 로고
    • Global analysis of Borrelia burgdorferi genes regulated by mammalian host-specific signals
    • Brooks CS, Hefty PS, Jolliff SE, Akins DR. Global analysis of Borrelia burgdorferi genes regulated by mammalian host-specific signals, Infect Immun. 2003;71:3371-83.
    • (2003) Infect Immun , vol.71 , pp. 3371-3383
    • Brooks, C.S.1    Hefty, P.S.2    Jolliff, S.E.3    Akins, D.R.4
  • 16
    • 0037099692 scopus 로고    scopus 로고
    • Molecular adaptation of Borrelia burgdorferi in the murine host
    • Liang FT, Nelson FK, Fikrig E. Molecular adaptation of Borrelia burgdorferi in the murine host, J Exp Med. 2002;196:275-80.
    • (2002) J Exp Med , vol.196 , pp. 275-280
    • Liang, F.T.1    Nelson, F.K.2    Fikrig, E.3
  • 18
    • 0036892867 scopus 로고    scopus 로고
    • Genomic scale analysis of Pasteurella multocida gene expression during growth within the natural chicken host
    • Boyce JD, Wilkie I, Harper M, Paustian ML, Kapur V, Adler B. Genomic scale analysis of Pasteurella multocida gene expression during growth within the natural chicken host. Infect Immun. 2002;70:6871-9.
    • (2002) Infect Immun , vol.70 , pp. 6871-6879
    • Boyce, J.D.1    Wilkie, I.2    Harper, M.3    Paustian, M.L.4    Kapur, V.5    Adler, B.6
  • 19
    • 1542328245 scopus 로고    scopus 로고
    • Genomic-scale analysis of Pasteurella multocida gene expression during growth within liver tissue of chickens with fowl cholera
    • Boyce JD, Wilkie I, Harper M, Paustian ML, Kapur V, Adler B. Genomic-scale analysis of Pasteurella multocida gene expression during growth within liver tissue of chickens with fowl cholera. Microbes Infect. 2004;6:290-8.
    • (2004) Microbes Infect , vol.6 , pp. 290-298
    • Boyce, J.D.1    Wilkie, I.2    Harper, M.3    Paustian, M.L.4    Kapur, V.5    Adler, B.6
  • 20
    • 0037417816 scopus 로고    scopus 로고
    • Determination of the transcriptome of Vibrio cholerae during intraintestinal growth and midexponential phase in vitro
    • Xu Q, Dziejman M, Mekalanos JJ. Determination of the transcriptome of Vibrio cholerae during intraintestinal growth and midexponential phase in vitro. Proc Natl Acad Sci USA. 2003;100:1286-91.
    • (2003) Proc Natl Acad Sci USA , vol.100 , pp. 1286-1291
    • Xu, Q.1    Dziejman, M.2    Mekalanos, J.J.3
  • 22
    • 0036259796 scopus 로고    scopus 로고
    • Proteomic analysis of differentially expressed Chlamydia pneumoniae genes during persistent infection of HEp-2 cells
    • Molestina RE, Klein JB, Miller RD, Pierce WH, Ramirez JA, Summersgill JT. Proteomic analysis of differentially expressed Chlamydia pneumoniae genes during persistent infection of HEp-2 cells. Infect Immun. 2002;70:2976-81.
    • (2002) Infect Immun , vol.70 , pp. 2976-2981
    • Molestina, R.E.1    Klein, J.B.2    Miller, R.D.3    Pierce, W.H.4    Ramirez, J.A.5    Summersgill, J.T.6
  • 24
    • 0036960144 scopus 로고    scopus 로고
    • Gene expression profile in Neisseria meningitidis and Neisseria lactamica upon host-cell contact: From basic research to vaccine development
    • Grifantini R, Bartolini E, Muzzi A, Draghi M, Frigimelica E, Berger J, et al. Gene expression profile in Neisseria meningitidis and Neisseria lactamica upon host-cell contact: from basic research to vaccine development. Ann N Y Acad Sci. 2002;975:202-16.
    • (2002) Ann N Y Acad Sci , vol.975 , pp. 202-216
    • Grifantini, R.1    Bartolini, E.2    Muzzi, A.3    Draghi, M.4    Frigimelica, E.5    Berger, J.6
  • 25
    • 0033822730 scopus 로고    scopus 로고
    • Identification of Pasteurella multocida virulence genes in a septicemic mouse model using signature-tagged mutagenesis
    • Fuller TE, Kennedy MJ, Lowery DE. Identification of Pasteurella multocida virulence genes in a septicemic mouse model using signature-tagged mutagenesis. Microb Pathog. 2000;29:25-38.
    • (2000) Microb Pathog , vol.29 , pp. 25-38
    • Fuller, T.E.1    Kennedy, M.J.2    Lowery, D.E.3
  • 26
    • 0041823270 scopus 로고    scopus 로고
    • Signature-tagged mutagenesis of Pasteurella multocida identifies mutants displaying differential virulence characteristics in mice and chickens
    • Harper M, Boyce JD, Wilkie I, Adler B. Signature-tagged mutagenesis of Pasteurella multocida identifies mutants displaying differential virulence characteristics in mice and chickens. Infect Immun. 2003;71:5440-6.
    • (2003) Infect Immun , vol.71 , pp. 5440-5446
    • Harper, M.1    Boyce, J.D.2    Wilkie, I.3    Adler, B.4
  • 27
    • 0031953143 scopus 로고    scopus 로고
    • Use of signature-tagged transposon mutagenesis to identify Vibrio cholerae genes critical for colonization
    • Chiang SL, Mekalanos JJ. Use of signature-tagged transposon mutagenesis to identify Vibrio cholerae genes critical for colonization. Mol Microbiol. 1998;27:797-805.
    • (1998) Mol Microbiol , vol.27 , pp. 797-805
    • Chiang, S.L.1    Mekalanos, J.J.2
  • 28
    • 0037321898 scopus 로고    scopus 로고
    • Genomic and proteonic analysis of mitochondrial carrier proteins in Arabidopsis
    • Millar AH, Heazlewood JL. Genomic and proteonic analysis of mitochondrial carrier proteins in Arabidopsis. Plant Physiol. 2003;131:443-53.
    • (2003) Plant Physiol , vol.131 , pp. 443-453
    • Millar, A.H.1    Heazlewood, J.L.2
  • 30
    • 2542574741 scopus 로고    scopus 로고
    • Complementary analysis of the Mycobacterium tuberculosis proteome by two-dimensional electrophoresis and 1 isotope coded affinity tag technology
    • Schmidt F, Donahoe S, Hagens K, Mattow J, Schaible U, Kaufmann S, et al. Complementary analysis of the Mycobacterium tuberculosis proteome by two-dimensional electrophoresis and 1 isotope coded affinity tag technology. Mol Cell Proteomics. 2004;3:24-42.
    • (2004) Mol Cell Proteomics , vol.3 , pp. 24-42
    • Schmidt, F.1    Donahoe, S.2    Hagens, K.3    Mattow, J.4    Schaible, U.5    Kaufmann, S.6
  • 31
    • 0033016717 scopus 로고    scopus 로고
    • Correlation between protein and mRNA abundance in yeast
    • Gygi SP, Rochon V, Franza BR, Aebersold R. Correlation between protein and mRNA abundance in yeast. Mol Cell Biol. 1999;19:1720-30.
    • (1999) Mol Cell Biol , vol.19 , pp. 1720-1730
    • Gygi, S.P.1    Rochon, V.2    Franza, B.R.3    Aebersold, R.4
  • 32
    • 0036545614 scopus 로고    scopus 로고
    • Complementary profiling of gene expression at the transcriptome and proteome levels in Saccharomyces cerevisiae
    • Griffin TJ, Gygi SP, Ideker T, Rist B, Eng J, Hood L, et al. Complementary profiling of gene expression at the transcriptome and proteome levels in Saccharomyces cerevisiae. Mol Cell Proteomics. 2002;1:323-33.
    • (2002) Mol Cell Proteomics , vol.1 , pp. 323-333
    • Griffin, T.J.1    Gygi, S.P.2    Ideker, T.3    Rist, B.4    Eng, J.5    Hood, L.6
  • 33
    • 0034714499 scopus 로고    scopus 로고
    • Gene expression profiling: Monitoring transcription and translation products using DNA microarrays and proteomics
    • Celis JE, Kruhoffer M, Gromova I, Frederiksen C, Ostergaard M, Thykjaer T, et al. Gene expression profiling: monitoring transcription and translation products using DNA microarrays and proteomics. FEBS Lett. 2000;480:2-16.
    • (2000) FEBS Lett , vol.480 , pp. 2-16
    • Celis, J.E.1    Kruhoffer, M.2    Gromova, I.3    Frederiksen, C.4    Ostergaard, M.5    Thykjaer, T.6
  • 34
    • 0042357079 scopus 로고    scopus 로고
    • Transcriptional, proteomic, and metabolic responses to lithium in galactose-grown yeast cells
    • Bro C, Regenberg B, Lagniel G, Labarre J, Montero-Lomeli M, Nielsen J. Transcriptional, proteomic, and metabolic responses to lithium in galactose-grown yeast cells. J Biol Chem. 2003;278:32141-9.
    • (2003) J Biol Chem , vol.278 , pp. 32141-32149
    • Bro, C.1    Regenberg, B.2    Lagniel, G.3    Labarre, J.4    Montero-Lomeli, M.5    Nielsen, J.6
  • 35
    • 0346887181 scopus 로고    scopus 로고
    • Proteomic and transcriptomic analysis of interleukin-1b treated lung carcinoma cell line
    • Kim CH, Kim do K, Choi SJ, Choi KH, Song KS, Chi J, et al. Proteomic and transcriptomic analysis of interleukin-1b treated lung carcinoma cell line. Proteomics. 2003;3:2454-71.
    • (2003) Proteomics , vol.3 , pp. 2454-2471
    • Kim, C.H.1    Kim Do, K.2    Choi, S.J.3    Choi, K.H.4    Song, K.S.5    Chi, J.6
  • 36
    • 1042266670 scopus 로고    scopus 로고
    • The yeast mitochondrial proteome, a study of fermentative and respiratory growth
    • Ohlmeier S, Kastaniotis AJ, Hiltunen JK, Bergmann U. The yeast mitochondrial proteome, a study of fermentative and respiratory growth, J Biol Chem. 2004;279:3956-79.
    • (2004) J Biol Chem , vol.279 , pp. 3956-3979
    • Ohlmeier, S.1    Kastaniotis, A.J.2    Hiltunen, J.K.3    Bergmann, U.4
  • 37
    • 0036121913 scopus 로고    scopus 로고
    • Global analysis of outer membrane proteins from Leptospira interrogans serovar Lai
    • Cullen PA, Cordwell SJ, Bulach DM, Haake DA, Adler B. Global analysis of outer membrane proteins from Leptospira interrogans serovar Lai. Infect Immun. 2002;70:2311-8.
    • (2002) Infect Immun , vol.70 , pp. 2311-2318
    • Cullen, P.A.1    Cordwell, S.J.2    Bulach, D.M.3    Haake, D.A.4    Adler, B.5
  • 38
    • 0036436715 scopus 로고    scopus 로고
    • Proteomic analysis of response to acid in Listeria monocytogenes
    • Phan-Thanh L. Proteomic analysis of response to acid in Listeria monocytogenes. Methods Enzymol. 2002;358:256-76.
    • (2002) Methods Enzymol , vol.358 , pp. 256-276
    • Phan-Thanh, L.1
  • 39
    • 0036440483 scopus 로고    scopus 로고
    • Proteomic analysis of pH-dependent stress responses in Escherichia coli and Helicobacter pylori using two-dimensional gel electrophoresis
    • Slonczewski JL, Kirkpatrick C. Proteomic analysis of pH-dependent stress responses in Escherichia coli and Helicobacter pylori using two-dimensional gel electrophoresis. Methods Enzymol. 2002;358:228-42.
    • (2002) Methods Enzymol , vol.358 , pp. 228-242
    • Slonczewski, J.L.1    Kirkpatrick, C.2
  • 41
    • 0037161201 scopus 로고    scopus 로고
    • Comparison of protein patterns of Listeria monocytogenes grown in biofilm or in planktonic mode by proteomic analysis
    • Tremoulet F, Duche O, Namane A, Martinie B, Labadie JC. Comparison of protein patterns of Listeria monocytogenes grown in biofilm or in planktonic mode by proteomic analysis. FEMS Microbiol Lett. 2002;210:25-31.
    • (2002) FEMS Microbiol Lett , vol.210 , pp. 25-31
    • Tremoulet, F.1    Duche, O.2    Namane, A.3    Martinie, B.4    Labadie, J.C.5
  • 42
    • 0142182383 scopus 로고    scopus 로고
    • Carbon starvation survival of Listeria monocytogenes in planktonic state and in biofilm: A proteomic study
    • Helloin E, Jansch L, Phan-Thanh L. Carbon starvation survival of Listeria monocytogenes in planktonic state and in biofilm: a proteomic study. Proteomics. 2003;3:2052-64.
    • (2003) Proteomics , vol.3 , pp. 2052-2064
    • Helloin, E.1    Jansch, L.2    Phan-Thanh, L.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.