Population structure of Alaskan shortraker rockfish, Sebastes borealis, inferred from microsatellite variation

Environmental Biology of Fishes

Volumn 69, Issue 1-4, 2004, Pages 201-210

  Matala, Andrew P ^a   Gray, Andrew K ^a,b   Heifetz, Jonathan ^b   Gharrett, Anthony J ^a  

^a UNIVERSITY OF ALASKA SOUTHEAST   (United States)

^b NATIONAL MARINE FISHERIES SERVICE   (United States)

Author keywords

Marine fisheries; Population genetics; Wakefield Symposium

Indexed keywords

FISHERY; GENETIC VARIATION; POPULATION GENETICS; POPULATION STRUCTURE; SIZE STRUCTURE;

ALASKA; ALEUTIAN ISLANDS; NORTH AMERICA; UNITED STATES;

SEBASTES; SEBASTES BOREALIS; TRANSPOSONS;

EID: 3543041343     PISSN: 03781909     EISSN: None     Source Type: Journal    
DOI: 10.1023/B:EBFI.0000022876.71349.be     Document Type: Conference Paper

References (34)

1. Ackley, D.R. & J. Heifetz. 2001. Fishing practices under maximum retainable bycatch rates in Alaska's groundfish fisheries. Alaska Fish. Res. Bull. 8: 22-44.
2. Cavalli-Sforza, L.L. & A.W.F. Edwards. 1967. Phylogenetic analysis: Models and estimation procedures. Evolution 21: 550-570.
3. Geiger, H.J., W.W. Smoker, L.A. Zhivotovsky & A.J. Gharrett. 1999. Variability of family size and marine survival in pink salmon (Oncorhynchus gorbuscha) has implications for conservation biology and human use. Can. J. Fish. Aquat. Sci. 54: 2684-2690.
4. Hedgecock, D. 1994. Does variance in reproductive success limit effective population sizes of marine organisms? pp. 122-134, In: A.R. Beaumont (ed.) Genetics and Evolution of Aquatic Organisms, Chapman & Hall, London.
5. Kendall, A.W., Jr. 1991. Systematics and identification of larvae and juveniles of the genus Sebastes. Environ. Biol. Fish. 30: 173-190.
6. Love, M.S., M.H. Carr & L.J. Haldorson. 1991. The ecology of substrate-associated juveniles of the genus Sebastes. Environ. Biol. Fish. 30: 225-243.
7. Lunsford, C.R. 1999. Distribution patterns and reproductive aspects of Pacific ocean perch (Sebastes alutus) in the Gulf of Alaska. M.S. Thesis, University of Alaska Fairbanks, AK. 145 pp.
8. Malécot, G. 1950. Quelques schémas probabilistes sur la variabilité des populations naturelles. Annales de l'Université de Lyon Sciences, Section A 13: 37-60.
9. Manly, B.F.J. 1985. The Statistics of Natural Selection on Animal Populations. Chapman & Hall. London & New York. 475 pp.
10. Mantel, N.A. 1967. The detection of disease clustering and a generalized regression approach. Cancer Res. 27: 209-220.
11. Mason, J.E. 1998. Declining rockfish lengths in the Monterey Bay, California, recreational fishery. 1959-1994. Mar. Fish. Rev. 60: 15-28.
12. McDermott, S.F. 1994. Reproductive Biology of Rougheye and Shortraker Rockfish, Sebastes aleutianus and Sebastes borealis. M.S. Thesis, University of Washington, Seattle, WA. 76 pp.
13. Moles, A., J. Heifetz & D.C. Love. 1998. Metazoan parasites as potential markers for selected Gulf of Alaska rockfish. Fish. Bull. 96: 912-916.
14. Moser, G.H. & G.W. Boehlert. 1991. Ecology of planktonic larvae and juveniles of the genus Sebastes. Environ. Biol. Fish. 30: 203-224.
15. Munk, K.M. 2001. Maximum Ages of groundfish in waters off Alaska and British Columbia and considerations of age determination. Alaska Fish. Res. Bull. 8: 12-21.
16. Ohta, T. 1982. Linkage disequilibrium due to random genetic drift in finite subdivided populations. Proc. Natl Acad. Sci. U.S.A. 79: 1940-1944.
17. Orlov, A.M. 2001. Ocean current patterns and aspects of life history of some Northwestern Pacific scorpaenids. pp. 161-184. In: G.H. Kruse, N. Bez, A. Booth, M.W. Dorn, S. Hills, R.N. Lipcius, D. Pelletier, C. Roy, S.J. Smith & D. Witherell (ed.) Spatial Processes and Management of Marine Populations. Pub. No. AK-SG-01-02. University of Alaska Sea Grant College Program, Fairbanks, AK.
18. Raymond, M. & F. Rousset. 1995a. GENEPOP (version 3.2a): Population genetics software for exact tests and ecumenicism. J. Hered. 86: 248-249.
19. Raymond, M. & F. Rousset. 1995b. An exact test for population differentiation. Evolution 49: 1280-1283.
20. Rice, W.R. 1989. Analyzing tables of statistical tests. Evolution 43: 223-225.
21. Rocha-Olivares, A. & R.D. Vetter. 1999. Effects of oceanographie circulation on the gene flow, genetic structure, and phylogeography of the rosethorn rockfish (Sebastes Helvomaculatus). Can. J. Fish. Aquat. Sci. 56: 803-813.
22. Roques, S., P. Duchesne & L. Bernatchez. 1999. Potential of microsatellites for individual assignment: The North Atlantic redfish (genus Sebastes) species complex as a case study. Mol. Ecol. 8: 1703-1717.
23. Sankoh, A.J., M.F. Huque & S.D. Dubey. 1997. Some comments on frequently used multiple endpoint adjustments methods in clinical trials. Stat. Med. 16: 2529-2542.
24. Seeb, L.W. 1998. Gene flow and introgression within and among three species of rockfishes, Sebastes auriculatus, S. caurinus, and S. maliger. J. Hered. 89: 393-404.
25. Seutin, G., B.N. White & P.T. Boag. 1991. Preservation of avian blood and tissue samples for DNA analysis. Can. J. Zool. 69: 82-90.
26. Slatkin, M. 1995. A measure of population subdivision based on microsatellite allele frequencies. Genetics 139: 457-462.
27. Sokal, R.R. & J.F. Rohlf. 1995. Biometry, 3rd edition. W.H. Freeman, NY. 877 pp.
28. Stanley, R.D., B.M. Leaman, L. Haldorson & V.M. O'Connell. 1994. Movements of tagged adult yellowtail rockfish, Sebastes flavidus, off the west coast of North America. Fish. Bull. 92: 655-662.
29. Tokranov, A.M. & L.L. Davydov. 1997. Some aspects of biology of the shortraker rockfish Sebastes borealis (scorpaenidae) in the Pacific waters of Kamchatka and western part of the Bering Sea: 1. spatial and bathymetric distribution. J. Ichthyol. 37: 761-768.
30. Weir, B.S. & C.C. Cockerham. 1984. Estimating F-statistics for the analysis of population structure. Evolution 38: 1358-1370.
31. Wimberger, P., J. Burr, A. Gray, A. Lopez & P. Bentzen. 1999. Isolation and characterization of twelve microsatellite loci for rockfish (Sebastes). Mar. Biotechnol. 1: 311-315.
32. Winer, B.J. 1971. Statistical Principles and Experimental Design, 2nd edition, McGraw-Hill Inc., NY. 907 pp.
33. Withler, R.E., T.D. Beacham, A.D. Schultze, L.J. Richards & K.M. Miller. 2001. Co-existing populations of Pacific ocean perch. Sebastes alutus, in Queen Charlotte Sound, British Columbia. Mar. Biol. 139: 1-12.
34. Wright, S. 1978. Variability within and among natural populations, Vol. 4, The University of Chicago Press, Chicago, IL. 580 pp.