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Volumn 11, Issue 8, 2004, Pages 763-769

Nucleosomes facilitate their own invasion

Author keywords

[No Author keywords available]

Indexed keywords

DNA; DNA POLYMERASE; HISTONE; LEXA PROTEIN;

EID: 3542998667     PISSN: 15459993     EISSN: None     Source Type: Journal    
DOI: 10.1038/nsmb801     Document Type: Article
Times cited : (306)

References (39)
  • 1
    • 0037992395 scopus 로고    scopus 로고
    • The structure of DNA in the nucleosome core
    • Richmond, T.J. & Davey, C.A. The structure of DNA in the nucleosome core. Nature 423, 145-150.
    • Nature , vol.423 , pp. 145-150
    • Richmond, T.J.1    Davey, C.A.2
  • 2
    • 0029115016 scopus 로고
    • Nucleosome positioning on the MMTV LTR results from the frequency-biased occupancy of multiple frames
    • Fragoso, G., John, S., Roberts, M.S. & Hager, G.L. Nucleosome positioning on the MMTV LTR results from the frequency-biased occupancy of multiple frames. Genes Dev. 9, 1933-1947 (1995).
    • (1995) Genes Dev. , vol.9 , pp. 1933-1947
    • Fragoso, G.1    John, S.2    Roberts, M.S.3    Hager, G.L.4
  • 3
    • 0030581149 scopus 로고    scopus 로고
    • Chromatin unfolds
    • Felsenfeld, G. Chromatin unfolds. Cell 186, 13-19 (1996).
    • (1996) Cell , vol.186 , pp. 13-19
    • Felsenfeld, G.1
  • 4
    • 0033119021 scopus 로고    scopus 로고
    • Chromatin-modifying and -remodeling complexes
    • Kornberg, R.D. & Lorch, Y. Chromatin-modifying and -remodeling complexes. Curr. Opin. Genet. Dev. 9, 148-151 (1999).
    • (1999) Curr. Opin. Genet. Dev. , vol.9 , pp. 148-151
    • Kornberg, R.D.1    Lorch, Y.2
  • 5
    • 0036849262 scopus 로고    scopus 로고
    • Epigenetic consequences of nucleosome dynamics
    • Ahmad, K. & Henikoff, S. Epigenetic consequences of nucleosome dynamics. Cell 111, 281-284 (2002).
    • (2002) Cell , vol.111 , pp. 281-284
    • Ahmad, K.1    Henikoff, S.2
  • 6
    • 85015069067 scopus 로고    scopus 로고
    • Controlling the double helix
    • Felsenfeld, G. & Groudine, M. Controlling the double helix. Nature 421, 448-453 (2003).
    • (2003) Nature , vol.421 , pp. 448-453
    • Felsenfeld, G.1    Groudine, M.2
  • 7
    • 0033529565 scopus 로고    scopus 로고
    • Twenty-five years of the nucleosome, fundamental particle of the eukaryote chromosome
    • Kornberg, R.D. & Lorch, Y. Twenty-five years of the nucleosome, fundamental particle of the eukaryote chromosome. Cell 98, 285-294 (1999).
    • (1999) Cell , vol.98 , pp. 285-294
    • Kornberg, R.D.1    Lorch, Y.2
  • 8
    • 0037154963 scopus 로고    scopus 로고
    • Cooperation between complexes that regulate chromatin structure and transcription
    • Narlikar, G.J., Fan, H.Y. & Kingston, R.E. Cooperation between complexes that regulate chromatin structure and transcription. Cell 108, 475-487 (2002).
    • (2002) Cell , vol.108 , pp. 475-487
    • Narlikar, G.J.1    Fan, H.Y.2    Kingston, R.E.3
  • 9
    • 0037512311 scopus 로고    scopus 로고
    • Distinct strategies to make nucleosomal DNA accessible
    • Fan, H.-Y., He, X., Kingston, R.E. & Narlikar, G.J. Distinct strategies to make nucleosomal DNA accessible. Mol. Cell 11, 1311-1322 (2003).
    • (2003) Mol. Cell , vol.11 , pp. 1311-1322
    • Fan, H.-Y.1    He, X.2    Kingston, R.E.3    Narlikar, G.J.4
  • 11
    • 0035930334 scopus 로고    scopus 로고
    • ISWI induces nucleosome sliding on nicked DNA
    • Längst, G. & Becker, P.B. ISWI induces nucleosome sliding on nicked DNA. Mol. Cell 8, 1085-1092 (2001).
    • (2001) Mol. Cell , vol.8 , pp. 1085-1092
    • Längst, G.1    Becker, P.B.2
  • 12
    • 0028791330 scopus 로고
    • Mechanism of protein access to specific DNA sequences in chromatin: A dynamic equilibrium model for gene regulation
    • Polach, K.J. & Widom, J. Mechanism of protein access to specific DNA sequences in chromatin: a dynamic equilibrium model for gene regulation. J. Mol. Biol. 254, 130-149 (1995).
    • (1995) J. Mol. Biol. , vol.254 , pp. 130-149
    • Polach, K.J.1    Widom, J.2
  • 13
    • 0029875865 scopus 로고    scopus 로고
    • A model for the cooperative binding of eukaryotic regulatory proteins to nucleosomal target sites
    • Polach, K.J. & Widom, J. A model for the cooperative binding of eukaryotic regulatory proteins to nucleosomal target sites. J. Mol. Biol. 258, 800-812 (1996).
    • (1996) J. Mol. Biol. , vol.258 , pp. 800-812
    • Polach, K.J.1    Widom, J.2
  • 14
    • 0037438345 scopus 로고    scopus 로고
    • Quantitative approaches to problems of eukaryotic gene expression
    • Felsenfeld, G. Quantitative approaches to problems of eukaryotic gene expression. Biophys. Chem. 100, 607-613 (2003).
    • (2003) Biophys. Chem. , vol.100 , pp. 607-613
    • Felsenfeld, G.1
  • 15
    • 0037369952 scopus 로고    scopus 로고
    • Collaborative competition mechanism for gene activation in vivo
    • Miller, J.A. & Widom, J. Collaborative competition mechanism for gene activation in vivo. Mol. Cell. Biol. 23, 1623-1632 (2003).
    • (2003) Mol. Cell. Biol. , vol.23 , pp. 1623-1632
    • Miller, J.A.1    Widom, J.2
  • 16
    • 0023663417 scopus 로고
    • Nucleosomes inhibit the initiation of transcription but allow chain elongation with the displacement of histones
    • Lorch, Y., LaPointe, J.W. & Kornberg, R.D. Nucleosomes inhibit the initiation of transcription but allow chain elongation with the displacement of histones. Cell 49, 203-210 (1987).
    • (1987) Cell , vol.49 , pp. 203-210
    • Lorch, Y.1    LaPointe, J.W.2    Kornberg, R.D.3
  • 17
    • 0025780941 scopus 로고
    • Facilitated binding of GAL4 and heat shock factor to nucleosomal templates: Differential function of DNA-binding domains
    • Taylor, I.C.A., Workman, J.L., Schuetz, T.J. & Kingston, R.E. Facilitated binding of GAL4 and heat shock factor to nucleosomal templates: differential function of DNA-binding domains. Genes Dev. 5, 1285-1298 (1991).
    • (1991) Genes Dev. , vol.5 , pp. 1285-1298
    • Taylor, I.C.A.1    Workman, J.L.2    Schuetz, T.J.3    Kingston, R.E.4
  • 18
    • 0028127762 scopus 로고
    • Role of the histone amino termini in facilitated binding of a transcription factor, GAL4-AH, to nucleosome cores
    • Vettese-Dadey, M., Walter, P., Chen, H., Juan, L.-J. & Workman, J.L. Role of the histone amino termini in facilitated binding of a transcription factor, GAL4-AH, to nucleosome cores. Mol. Cell. Biol. 14, 970-981 (1994).
    • (1994) Mol. Cell. Biol. , vol.14 , pp. 970-981
    • Vettese-Dadey, M.1    Walter, P.2    Chen, H.3    Juan, L.-J.4    Workman, J.L.5
  • 19
    • 0029841339 scopus 로고    scopus 로고
    • Remodeling the chromatin structure of a nucleosome array by transcription factor-targeted trans-displacement of histones
    • Owen-Hughes, T. & Workman, J.L. Remodeling the chromatin structure of a nucleosome array by transcription factor-targeted trans-displacement of histones. EMBO J. 15, 4702-4712 (1996).
    • (1996) EMBO J. , vol.15 , pp. 4702-4712
    • Owen-Hughes, T.1    Workman, J.L.2
  • 20
    • 0029826906 scopus 로고    scopus 로고
    • Persistent site-specific remodeling of a nucleosome array by transient action of the SWI/SNF complex
    • Owen-Hughes, T., Utley, R.T., Cote, J., Peterson, C.L. & Workman, J.L. Persistent site-specific remodeling of a nucleosome array by transient action of the SWI/SNF complex. Science 273, 513-516 (1996).
    • (1996) Science , vol.273 , pp. 513-516
    • Owen-Hughes, T.1    Utley, R.T.2    Cote, J.3    Peterson, C.L.4    Workman, J.L.5
  • 21
    • 0029091306 scopus 로고
    • A positive role for nucleosome mobility in the transcriptional activity of chromatin templates: Restriction by linker histones
    • Ura, K., Hayes, J.J. & Wolffe, A.P. A positive role for nucleosome mobility in the transcriptional activity of chromatin templates: restriction by linker histones. EMBO J. 14, 3752-3765 (1995).
    • (1995) EMBO J. , vol.14 , pp. 3752-3765
    • Ura, K.1    Hayes, J.J.2    Wolffe, A.P.3
  • 22
    • 0026642219 scopus 로고
    • Mobile nucleosomes - A general behavior
    • Meersseman, G., Pennings, S. & Bradbury, E.M. Mobile nucleosomes-a general behavior. EMBOJ. 11, 2951-2959 (1992).
    • (1992) EMBOJ , vol.11 , pp. 2951-2959
    • Meersseman, G.1    Pennings, S.2    Bradbury, E.M.3
  • 23
    • 0036786970 scopus 로고    scopus 로고
    • Spontaneous access of proteins to buried nucleosomal DNA target sites occurs via a mechanism that is distinct from nucleosome translocation
    • Anderson, J.D., Thåström, A. & Widom, J. Spontaneous access of proteins to buried nucleosomal DNA target sites occurs via a mechanism that is distinct from nucleosome translocation. Mol. Cell. Biol. 22, 7147-7157 (2002).
    • (2002) Mol. Cell. Biol. , vol.22 , pp. 7147-7157
    • Anderson, J.D.1    Thåström, A.2    Widom, J.3
  • 26
    • 0031860225 scopus 로고    scopus 로고
    • Chromatin-remodeling factors: Machines that regulate?
    • Varga-Weisz, P.D. & Becker, P.B. Chromatin-remodeling factors: machines that regulate? Curr. Biol. 10, 346-353 (1998).
    • (1998) Curr. Biol. , vol.10 , pp. 346-353
    • Varga-Weisz, P.D.1    Becker, P.B.2
  • 27
    • 0026687952 scopus 로고
    • Fluorescence resonance energy transfer and nucleic acids
    • Clegg, R.M. Fluorescence resonance energy transfer and nucleic acids. Methods Enzymol. 211, 353-388 (1992).
    • (1992) Methods Enzymol. , vol.211 , pp. 353-388
    • Clegg, R.M.1
  • 28
    • 0037057630 scopus 로고    scopus 로고
    • Initiation and re-initiation of DNA unwinding by the Escherichia coli Rep helicase
    • Ha, T. et al. Initiation and re-initiation of DNA unwinding by the Escherichia coli Rep helicase. Nature 419, 638-641 (2002).
    • (2002) Nature , vol.419 , pp. 638-641
    • Ha, T.1
  • 30
    • 0017895903 scopus 로고
    • The molecular theory of polyelectrolyte solutions with applications to the electrostatic properties of polynucleotides
    • Manning, G.S. The molecular theory of polyelectrolyte solutions with applications to the electrostatic properties of polynucleotides. Q. Rev. Biophys. 11, 179-246 (1978).
    • (1978) Q. Rev. Biophys. , vol.11 , pp. 179-246
    • Manning, G.S.1
  • 31
    • 0033000670 scopus 로고    scopus 로고
    • Restriction enzymes as probes of nucleosome stability
    • Polach, K.J. & Widom, J. Restriction enzymes as probes of nucleosome stability. Methods Enzymol. 304, 278-298 (1999).
    • (1999) Methods Enzymol. , vol.304 , pp. 278-298
    • Polach, K.J.1    Widom, J.2
  • 32
    • 0034598944 scopus 로고    scopus 로고
    • Sequence- and position-dependence of the equilibrium accessibility of nucleosomal DNA target sites
    • Anderson, J.D. & Widom, J. Sequence- and position-dependence of the equilibrium accessibility of nucleosomal DNA target sites. J. Mol. Biol. 296, 979-987 (2000).
    • (2000) J. Mol. Biol. , vol.296 , pp. 979-987
    • Anderson, J.D.1    Widom, J.2
  • 34
    • 0034131012 scopus 로고    scopus 로고
    • Recruitment of chromatin remodeling machines
    • Peterson, C.L. & Logie, C. Recruitment of chromatin remodeling machines. J. Cell. Biochem. 78, 179-185 (2000).
    • (2000) J. Cell. Biochem. , vol.78 , pp. 179-185
    • Peterson, C.L.1    Logie, C.2
  • 35
    • 0032512794 scopus 로고    scopus 로고
    • New DNA sequence rules for high affinity binding to histone octamer and sequence-directed nucleosome positioning
    • Lowary, P.T. & Widom, J. New DNA sequence rules for high affinity binding to histone octamer and sequence-directed nucleosome positioning. J. Mol. Biol. 276, 19-42 (1998).
    • (1998) J. Mol. Biol. , vol.276 , pp. 19-42
    • Lowary, P.T.1    Widom, J.2
  • 36
    • 0037436410 scopus 로고    scopus 로고
    • Chromatin fiber folding: Requirement for the histone H4 N-terminal tail
    • Dorigo, B., Schalch, T., Bystricky, K. & Richmond, T.J. Chromatin fiber folding: requirement for the histone H4 N-terminal tail. J. Mol. Biol. 327, 85-96 (2003).
    • (2003) J. Mol. Biol. , vol.327 , pp. 85-96
    • Dorigo, B.1    Schalch, T.2    Bystricky, K.3    Richmond, T.J.4
  • 37
    • 0033039285 scopus 로고    scopus 로고
    • Preparation of nucleosome core particle from recombinant histones
    • Luger, K., Rechsteiner, T.J. & Richmond, T.J. Preparation of nucleosome core particle from recombinant histones. Methods Enzymol. 304, 3-19 (1999).
    • (1999) Methods Enzymol. , vol.304 , pp. 3-19
    • Luger, K.1    Rechsteiner, T.J.2    Richmond, T.J.3
  • 38
    • 0028672846 scopus 로고
    • Cleavage of LexA repressor
    • Little, J.W. et al. Cleavage of LexA repressor. Methods Enzymol. 244, 266-284 (1994).
    • (1994) Methods Enzymol. , vol.244 , pp. 266-284
    • Little, J.W.1
  • 39
    • 1942489758 scopus 로고    scopus 로고
    • Nucleosomal locations of dominant DNA sequence motifs for histone-DNA interactions and nucleosome positioning
    • Thåström, A., Bingham, L.M. & Widom, J. Nucleosomal locations of dominant DNA sequence motifs for histone-DNA interactions and nucleosome positioning. J. Mol. Biol. 338, 695-709 (2004).
    • (2004) J. Mol. Biol. , vol.338 , pp. 695-709
    • Thåström, A.1    Bingham, L.M.2    Widom, J.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.