Use of multiple displacement amplification in the investigation of human papillomavirus physical status

Journal of Clinical Pathology

Volumn 60, Issue 10, 2007, Pages 1135-1139

  Evans, Mark Francis ^a   Adamson, Christine Stewart Crawford ^a   Von Walstrom, Genevieve Montagu ^a   Cooper, Kumarasen ^a  

^a UNIVERSITY OF VERMONT COLLEGE OF MEDICINE   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

DNA FRAGMENT; DNA POLYMERASE; PROTEIN E6; PROTEIN E7;

ARTICLE; CONTROLLED STUDY; CORRELATION ANALYSIS; CYTOLOGY; DNA TEMPLATE; GENE AMPLIFICATION; HUMAN; HUMAN CELL; HUMAN PAPILLOMAVIRUS TYPE 16; HUMAN PAPILLOMAVIRUS TYPE 18; MOLECULAR WEIGHT; NONHUMAN; PRIORITY JOURNAL; RECOMBINANT PLASMID; SOUTHERN BLOTTING; UTERINE CERVIX CARCINOMA; VIRUS TYPING; WART VIRUS;

EID: 35348931636     PISSN: 00219746     EISSN: None     Source Type: Journal    
DOI: 10.1136/jcp.2006.041392     Document Type: Article

References (19)

1. Syrjänen K, Syrjänen S. Molecular biology of papillomaviruses. In: Syrjänen K, Syrjänen S, eds. Papillomavirus infections in human pathology. Chichester: John Wiley and Sons, 2000:11-51.
2. Fukushima M, Yamakawa Y, Shimano S, et al. The physical state of human papillomavirus 16 DNA in cervical carcinoma and cervical intraepithelial neoplasia. Cancer 1990;66:2155-61.
3. Cullen AP, Reid R, Campion M, et al. Analysis of the physical state of different human papillomavirus DNAs in intraepithelial and invasive cervical neoplasm. J Virol 1991;65:606-12.
4. Pirami L, Giache V, Becciolini A. Analysis of HPV 16, 18, 31 and 35 DNA in pre-invasive and invasive lesions of the uterine cervix. J Clin Pathol 1997;50:600-4.
5. Das BC, Sharma JK, Gopalakrishna V, et al. Analysis by polymerase chain reaction of the physical state of human papillomavirus type 16 DNA in cervical preneoplastic and neoplastic lesions. J Gen Virol 1992;73:2327-36.
6. Daniel B, Mukherjee G, Seshadri L, et al. Changes in the physical state and expression of human papillomavirus type 16 in the progression of cervical intraepithelial neoplasia lesions analysed by PCR. J Gen Virol 1995;76:2589-593.
7. Nagao S, Yoshinouchi M, Miyagi Y, et al. Rapid and sensitive detection of physical status of human papillomavirus type 16 DNA by quantitative real-time PCR. J Clin Microbiol 2002;40:863-7.
8. Peitsaro P, Johansson B, Syrjanen S. Integrated human papillomavirus type 16 is frequently found in cervical cancer precursors as demonstrated by a novel quantitative real-time PCR technique. J Clin Microbiol 2002;40:886-91.
9. Kloes R, Woerner SM, Ridder R, et al. Detection of high-risk cervical intraepithelial neoplasia and cervical cancer by amplification of transcripts derived from integrated papillomavirus oncogenes. Cancer Res 1999;59:6132-6.
10. Evans MF, Cooper K. Human papillomavirus integration: detection by in situ hybridization and potential clinical application. J Pathol 2004;202:1-4.
11. Dean FB, Hosono S, Fang L, et al. Comprehensive human genome amplification using multiple displacement amplification. Proc Natl Acad Sci USA 2002;99:5261-6.
12. Hosono S, Faruqi AF, Dean FB, et al. Unbiased whole-genome amplification directly from clinical samples. Genome Res 2003;13:954-64.
13. Holbrook JF, Stabley D, Sol-Church K. Exploring whole genome amplification as a DNA recovery tool for molecular genetic studies. J Biomol Tech 2005;16:125-33.
14. Paez JG, Lin M, Beroukhim R, et al. Genome coverage and sequence fidelity of phi29 polymerase-based multiple strand displacement whole genome amplification. Nucleic Acids Res 2004;32:e71.
15. Tzvetkov MV, Becker C, Kulle B, et al. Genome-wide single-nucleotide polymorphism arrays demonstrate high fidelity of multiple displacement-based whole-genome amplification. Electrophoresis 2005;26:710-15.
16. Raghunathan A, Ferguson HR Jr, Bornarth Q, et al. Genomic DNA amplification from a single bacterium. Appl Environ Microbiol 2005;71:3342-47.
17. Jiang Z, Zhang X, Deka R, et al. Genome amplification of single sperm using multiple displacement amplification. Nucleic Acids Res 2005;33:e91.
18. Meissner JD. Nucleotide sequences and further characterization of human papillomavirus DNA present in the CaSki, SiHa and HeLa cervical carcinoma cell lines. J Gen Virol 1999;80:1725-33.
19. The Universal Virus Database of The International Committee on Taxonomy of Viruses. Papillomaviridae. http://www.ncbi.nlm.nih.gov/ ICTVdb/Ictv/fs_papil.htm (accessed May 2006).