-
1
-
-
0032562214
-
Role of the pathway through K(I-362) in proton transfer in cytochrome c oxidase from R. sphaeroides
-
Adelroth, P., Gennis, R. B. and Brzezinski, P. (1998) Role of the pathway through K(I-362) in proton transfer in cytochrome c oxidase from R. sphaeroides. Biochemistry 37, 2470-2476
-
(1998)
Biochemistry
, vol.37
, pp. 2470-2476
-
-
Adelroth, P.1
Gennis, R.B.2
Brzezinski, P.3
-
2
-
-
0026530174
-
Oxygen activation and the conservation of energy in cell respiration
-
Babcock, G. T. and Wikstrom, M. (1992) Oxygen activation and the conservation of energy in cell respiration. Nature 356, 301-309.
-
(1992)
Nature
, vol.356
, pp. 301-309
-
-
Babcock, G.T.1
Wikstrom, M.2
-
4
-
-
0347004716
-
The catalytic cycle of cytochrome c oxidase is not the sum of its two halves
-
Bloch, D., Belevich, I., Jasaitis, A., Ribacka, C., Puustinen, A., Verkhovsky, M. I., and Wikström, M. (2004) The catalytic cycle of cytochrome c oxidase is not the sum of its two halves, Proc. Natl. Acad. Sci. USA 101, 529-533.
-
(2004)
Proc. Natl. Acad. Sci. USA
, vol.101
, pp. 529-533
-
-
Bloch, D.1
Belevich, I.2
Jasaitis, A.3
Ribacka, C.4
Puustinen, A.5
Verkhovsky, M.I.6
Wikström, M.7
-
5
-
-
0037015164
-
The entry point of the K-proton-transfer pathway in cytochrome c oxidase
-
Branden, M., Tomson, F., Gennis, R. B. and Brzezinski, P. (2002) The entry point of the K-proton-transfer pathway in cytochrome c oxidase. Biochemistry 41, 10794-10798.
-
(2002)
Biochemistry
, vol.41
, pp. 10794-10798
-
-
Branden, M.1
Tomson, F.2
Gennis, R.B.3
Brzezinski, P.4
-
6
-
-
0028239826
-
Evolution of cytochrome oxidase, an enzyme older than atmospheric oxygen
-
Castresana, J., Lubben, M., Saraste, M. and Higgins, D. G. (1994) Evolution of cytochrome oxidase, an enzyme older than atmospheric oxygen, EMBO J. 13, 2516-2525.
-
(1994)
EMBO J
, vol.13
, pp. 2516-2525
-
-
Castresana, J.1
Lubben, M.2
Saraste, M.3
Higgins, D.G.4
-
8
-
-
0344745164
-
3-type cytochrome c oxidases of Paracoccus denitrificans reveals significant differences in proton pump design
-
3-type cytochrome c oxidases of Paracoccus denitrificans reveals significant differences in proton pump design. Mol. Microbiol. 20, 1247-1260.
-
(1996)
Mol. Microbiol
, vol.20
, pp. 1247-1260
-
-
de Gier, J.-W.L.1
Schepper, M.2
Reijnders, W.N.M.3
van Dyck, S.J.4
Slotboom, D.J.5
Warne, A.6
Saraste, M.7
Krab, K.8
Finel, M.9
Stouthamer, A.H.10
van Spanning, J.R.J.11
van der Oost, M.12
-
9
-
-
0022000283
-
Plasmids related to the broad host range vector, pRK290, useful for gene cloning and for monitoring gene expression
-
Ditta, G., Schmidhauser, T., Yacobson, E., Lu, P. Liang, X. W., Finlay, D. R., Guiney, D. and Helsinki, D. R. (1985) Plasmids related to the broad host range vector, pRK290, useful for gene cloning and for monitoring gene expression. Plasmid 13, 149-153.
-
(1985)
Plasmid
, vol.13
, pp. 149-153
-
-
Ditta, G.1
Schmidhauser, T.2
Yacobson, E.3
Lu, P.4
Liang, X.W.5
Finlay, D.R.6
Guiney, D.7
Helsinki, D.R.8
-
10
-
-
0028941458
-
Possible proton relay pathways in cytochrome c oxidase
-
Fetter, R. J., Qian, J., Shapleigh, J., Thomas, J. W., Gargia-Horsman, A., Schmidt, E., Hosler, J., Babcock, T. G., Gennis, R. B. and Ferguson-Miller, S. (1995) Possible proton relay pathways in cytochrome c oxidase. Prot. Natl. Acad. Sci. USA 192, 1604-1608.
-
(1995)
Prot. Natl. Acad. Sci. USA
, vol.192
, pp. 1604-1608
-
-
Fetter, R.J.1
Qian, J.2
Shapleigh, J.3
Thomas, J.W.4
Gargia-Horsman, A.5
Schmidt, E.6
Hosler, J.7
Babcock, T.G.8
Gennis, R.B.9
Ferguson-Miller, S.10
-
11
-
-
0028061194
-
The superfamily of heme-copper respiratory oxidases
-
Garcia-Horsman, J. A., Barquera, B., Rumbley, J., Ma, J. and Gennis, R. B. (1994) The superfamily of heme-copper respiratory oxidases. J. Bacteriol. 176, 5587-5600.
-
(1994)
J. Bacteriol
, vol.176
, pp. 5587-5600
-
-
Garcia-Horsman, J.A.1
Barquera, B.2
Rumbley, J.3
Ma, J.4
Gennis, R.B.5
-
12
-
-
0028206799
-
B center
-
B center. Biochemistry 33, 1194-1201.
-
(1994)
Biochemistry
, vol.33
, pp. 1194-1201
-
-
Hosler, J.P.1
Shapleigh, J.P.2
Tecklenburg, M.M.J.3
Thomas, J.W.4
Kim, Y.5
Espe, M.6
Fetter, J.7
Babcock, G.T.8
Alben, J.O.9
Gennis, R.B.10
Ferguson-Miller, S.11
-
14
-
-
9444278512
-
Polar Residues in Helix VIII of subunit I of cytochrome c oxidase influence the activity and the structure of the active site
-
Hosler, J. P., Shapleigh, J. P., Mitchell, D. H., Kim, Y., Pressler, M. A., Georgiou, C., Babcock, G. T., Alben, J. O., Ferguson-Miller, S. and Gennis, R. B. (1996) Polar Residues in Helix VIII of subunit I of cytochrome c oxidase influence the activity and the structure of the active site. Biochemistry 33, 10776-10783.
-
(1996)
Biochemistry
, vol.33
, pp. 10776-10783
-
-
Hosler, J.P.1
Shapleigh, J.P.2
Mitchell, D.H.3
Kim, Y.4
Pressler, M.A.5
Georgiou, C.6
Babcock, G.T.7
Alben, J.O.8
Ferguson-Miller, S.9
Gennis, R.B.10
-
15
-
-
0028890031
-
Structure at 2.8Å resolution of cytochrome c oxidase from Paracoccus denitrificans
-
Iwata, S., Ostermeier, C., Ludwig, B. and Michel, H. (1995). Structure at 2.8Å resolution of cytochrome c oxidase from Paracoccus denitrificans. Nature 376, 660-669.
-
(1995)
Nature
, vol.376
, pp. 660-669
-
-
Iwata, S.1
Ostermeier, C.2
Ludwig, B.3
Michel, H.4
-
16
-
-
0027503597
-
y can mediate the photosynthetic growth of Rhodobacter capsulatus and Rhodobacter sphaeroides
-
y can mediate the photosynthetic growth of Rhodobacter capsulatus and Rhodobacter sphaeroides. EMBO J. 12, 1283-1292.
-
(1993)
EMBO J
, vol.12
, pp. 1283-1292
-
-
Jenney, F.E.1
Daldal, F.2
-
17
-
-
0028231734
-
y of Rhodobacter capsulatus in photosynthetic electron transfer
-
y of Rhodobacter capsulatus in photosynthetic electron transfer. Biochemistry 33, 2496-2502.
-
(1994)
Biochemistry
, vol.33
, pp. 2496-2502
-
-
Jenney, F.E.1
Prince, R.C.2
Daldal, F.3
-
18
-
-
0039840998
-
Effects of mutation of the conserved lysine-362 in cytochrome c oxidase from Rhodobacter sphaeroides
-
Junemann, S., Meunier, B. and Gennis, R. B. (1997) Effects of mutation of the conserved lysine-362 in cytochrome c oxidase from Rhodobacter sphaeroides. Biochemistry 36, 14456-14464.
-
(1997)
Biochemistry
, vol.36
, pp. 14456-14464
-
-
Junemann, S.1
Meunier, B.2
Gennis, R.B.3
-
21
-
-
0030745897
-
The roles of the two proton input channels in cytochrome c oxidase from Rhodobacter sphaeroides probed by the effects of site-directed mutations on time-resolved electrogenic intraprotein proton transfer
-
Konstantinov, A. A., Siletsky, S., Mitchell, D., Kaulen, A. and Gennis, R. B. (1997) The roles of the two proton input channels in cytochrome c oxidase from Rhodobacter sphaeroides probed by the effects of site-directed mutations on time-resolved electrogenic intraprotein proton transfer, Proc. Natl. Acad. Sci. USA 94, 9085-9090.
-
(1997)
Proc. Natl. Acad. Sci. USA
, vol.94
, pp. 9085-9090
-
-
Konstantinov, A.A.1
Siletsky, S.2
Mitchell, D.3
Kaulen, A.4
Gennis, R.B.5
-
22
-
-
71849104860
-
Protein measurement with the folin phenol reagent
-
Lowry, O. H., Rosebrough, N. J., Farr A. L. and Randall, R. J. (1951) Protein measurement with the folin phenol reagent. J. Biol. Chem. 193, 265-275.
-
(1951)
J. Biol. Chem
, vol.193
, pp. 265-275
-
-
Lowry, O.H.1
Rosebrough, N.J.2
Farr, A.L.3
Randall, R.J.4
-
23
-
-
0028909685
-
Structure and function of a molecular machine-cytochrome c oxidase
-
Malatesta, F., Antonini, G., Sarti, P. and Brunori, M. (1995) Structure and function of a molecular machine-cytochrome c oxidase. Biophys. Chem. 54, 1-33.
-
(1995)
Biophys. Chem
, vol.54
, pp. 1-33
-
-
Malatesta, F.1
Antonini, G.2
Sarti, P.3
Brunori, M.4
-
24
-
-
0034640332
-
Where is 'outside' in cytochrome c oxidase and how and when do protons get there?
-
Mills, D. A., Florens, L., Hiser, C., Qian, J. and Ferguson-Miller, S. (2000) Where is 'outside' in cytochrome c oxidase and how and when do protons get there? Biochim. Biophys. Acta 1458, 180-187.
-
(2000)
Biochim. Biophys. Acta
, vol.1458
, pp. 180-187
-
-
Mills, D.A.1
Florens, L.2
Hiser, C.3
Qian, J.4
Ferguson-Miller, S.5
-
25
-
-
0034544593
-
3 oxidase in clinically relevant proteobacteria
-
3 oxidase in clinically relevant proteobacteria. Trends Microbiol. 8, 542-543.
-
(2000)
Trends Microbiol
, vol.8
, pp. 542-543
-
-
Myllykallio, H.1
Liebl, U.2
-
26
-
-
33747848994
-
Effects of five conserved histidine residues in the catalytic subunit of the cytochrome c oxidase on its function
-
Oh, J. I. (2006) Effects of five conserved histidine residues in the catalytic subunit of the cytochrome c oxidase on its function. J. Microbiol. 44, 284-292.
-
(2006)
J. Microbiol
, vol.44
, pp. 284-292
-
-
Oh, J.I.1
-
27
-
-
0030886203
-
Structure at 2.7 A resolution of the Paracoccus denitrificans two-subunit cytochrome oxidase complexed with an antibody Fv fragment
-
Ostermeier, C., Harrenga, A., Ermler, U. and Michel, H. (1997) Structure at 2.7 A resolution of the Paracoccus denitrificans two-subunit cytochrome oxidase complexed with an antibody Fv fragment. Proc. Natl. Acad. Sci. USA 94, 10547-10553.
-
(1997)
Proc. Natl. Acad. Sci. USA
, vol.94
, pp. 10547-10553
-
-
Ostermeier, C.1
Harrenga, A.2
Ermler, U.3
Michel, H.4
-
28
-
-
34547165994
-
-
3-type oxidase in Rhodobacter capsulatus. Mol. Biol. Rep. DOI:10.1007/s11033-006-9031- 9.
-
3-type oxidase in Rhodobacter capsulatus. Mol. Biol. Rep. DOI:10.1007/s11033-006-9031- 9.
-
-
-
-
29
-
-
0035371783
-
A novel scenario for the evolution of heme-copper oxygen reductases
-
Pereira, M. M., Santana, M. and Tixeira, M. (2001) A novel scenario for the evolution of heme-copper oxygen reductases. Biochim. Biophys. Acta 1505, 185-208.
-
(2001)
Biochim. Biophys. Acta
, vol.1505
, pp. 185-208
-
-
Pereira, M.M.1
Santana, M.2
Tixeira, M.3
-
32
-
-
0034643820
-
-
Pfitzner, U., Hoffmeier, K., Harrenga., Kannt, A., Hartmut, M., Bamberg, E., Oliver, M., Richter, H. and Ludwig, B. (2000) Tracing the D-pathway in reconstituted site-directed mutants of cytochrome c oxidase from Paracoccus denitrificans. Biochemistry 39, 6756-6762.
-
Pfitzner, U., Hoffmeier, K., Harrenga., Kannt, A., Hartmut, M., Bamberg, E., Oliver, M., Richter, H. and Ludwig, B. (2000) Tracing the D-pathway in reconstituted site-directed mutants of cytochrome c oxidase from Paracoccus denitrificans. Biochemistry 39, 6756-6762.
-
-
-
-
34
-
-
0027469984
-
Genes for a microaerobically induced oxidase complex in Bradyrhizobium japonicum are essential for a nitrogen-fixing endosymbiosis
-
Preisig, O., Anthamatten, D. and Hennecke, H. (1993) Genes for a microaerobically induced oxidase complex in Bradyrhizobium japonicum are essential for a nitrogen-fixing endosymbiosis. Proc. Natl. Acad. Sci. USA 90, 3309-3313.
-
(1993)
Proc. Natl. Acad. Sci. USA
, vol.90
, pp. 3309-3313
-
-
Preisig, O.1
Anthamatten, D.2
Hennecke, H.3
-
36
-
-
0031036849
-
Aspartate-407 in Rhodobacter sphaeroides cytochrome c oxidase is not required for proton pumping or manganese binding
-
Qian, J., Shi, W., Pressler, M., Hoganson, C., Mills, D., Babcock, G. T. and Ferguson-Miller, S. (1997) Aspartate-407 in Rhodobacter sphaeroides cytochrome c oxidase is not required for proton pumping or manganese binding. Biochemistry 36, 2539-2543.
-
(1997)
Biochemistry
, vol.36
, pp. 2539-2543
-
-
Qian, J.1
Shi, W.2
Pressler, M.3
Hoganson, C.4
Mills, D.5
Babcock, G.T.6
Ferguson-Miller, S.7
-
38
-
-
0004136246
-
-
2nd ed, Cold Spring Harbor Laboratory Press, New York, USA
-
Sambrook, J., Fritsch, E. F and Maniatis, T. (1989) Molecular Cloning: a Laboratory Manual, 2nd ed., Cold Spring Harbor Laboratory Press , New York, USA.
-
(1989)
Molecular Cloning: A Laboratory Manual
-
-
Sambrook, J.1
Fritsch, E.F.2
Maniatis, T.3
-
39
-
-
0023472472
-
Tricine-sodium dodecyl sulfate polyacrylamide gel electrophoresis for the separation of proteins in the range from 1 to 100 kDa
-
Schägger, H. and von Jagow, G. (1987) Tricine-sodium dodecyl sulfate polyacrylamide gel electrophoresis for the separation of proteins in the range from 1 to 100 kDa. Anal. Biochem. 166, 368-379.
-
(1987)
Anal. Biochem
, vol.166
, pp. 368-379
-
-
Schägger, H.1
von Jagow, G.2
-
40
-
-
0034984506
-
Structures and proton-pomping stratagies of mitochondrial respiratory enzymes
-
Schultz, B. and Chan, S. (2001) Structures and proton-pomping stratagies of mitochondrial respiratory enzymes. Annu. Rev. Biophys. Biomol. Struct. 30, 23-65.
-
(2001)
Annu. Rev. Biophys. Biomol. Struct
, vol.30
, pp. 23-65
-
-
Schultz, B.1
Chan, S.2
-
42
-
-
72849182812
-
A requirement for sodium in the growth of Rhodopseudomonas sphaeroides. J
-
Sistrom, W. (1960) A requirement for sodium in the growth of Rhodopseudomonas sphaeroides. J. Gen. Microbiol. 22, 778-785.
-
(1960)
Gen. Microbiol
, vol.22
, pp. 778-785
-
-
Sistrom, W.1
-
43
-
-
0036382724
-
The X-ray crystal structures of wild type and EQ(I-286) mutant cytochrome c oxidases from Rhodobacter sphaeroides
-
Svensson-Ek, M., Abramson, J., Larsson, G., Tornroth, S., Brzezinski, P. and Iwata, S. (2002) The X-ray crystal structures of wild type and EQ(I-286) mutant cytochrome c oxidases from Rhodobacter sphaeroides. J. Mol. Biol. 321, 329-339.
-
(2002)
J. Mol. Biol
, vol.321
, pp. 329-339
-
-
Svensson-Ek, M.1
Abramson, J.2
Larsson, G.3
Tornroth, S.4
Brzezinski, P.5
Iwata, S.6
-
44
-
-
0017170673
-
An improved staining procedure for the detection of the peroxidase activity of cytochrome P-450 on sodium dodecyl sulfate polyacrylamide gels
-
Thomas, P. E., Ryan, D. and Levin, W. (1976) An improved staining procedure for the detection of the peroxidase activity of cytochrome P-450 on sodium dodecyl sulfate polyacrylamide gels. Anal. Biochem. 75, 168-176.
-
(1976)
Anal. Biochem
, vol.75
, pp. 168-176
-
-
Thomas, P.E.1
Ryan, D.2
Levin, W.3
-
45
-
-
0027380681
-
Site-directed mutagenesis of highly conserved residues in helix VIII of subunit I of the cytochrome bo ubiquinol oxidase from Escherichia coli: An amphipathic transmembrane helix that may be important in conveying protons to the binuclear center
-
Thomas, J. W., Lemieux, L. J., Alben, J. O. and Gennis, R. B. (1993) Site-directed mutagenesis of highly conserved residues in helix VIII of subunit I of the cytochrome bo ubiquinol oxidase from Escherichia coli: An amphipathic transmembrane helix that may be important in conveying protons to the binuclear center. Biochemistry 32, 1173-11180.
-
(1993)
Biochemistry
, vol.32
, pp. 1173-11180
-
-
Thomas, J.W.1
Lemieux, L.J.2
Alben, J.O.3
Gennis, R.B.4
-
47
-
-
0029942862
-
The whole structure of the 13-subunit oxidized cytochrome c oxidase at 2.8 Å
-
Tsukihara, T., Aoyama, H., Yamashita, E., Tomizaki, T. and Yamaguchi, H., Shinzawa-Itoh, K., Nakashima, R., Yaono, R. and Yoshikawa, S. (1996) The whole structure of the 13-subunit oxidized cytochrome c oxidase at 2.8 Å. Science 272, 1136-1144.
-
(1996)
Science
, vol.272
, pp. 1136-1144
-
-
Tsukihara, T.1
Aoyama, H.2
Yamashita, E.3
Tomizaki, T.4
Yamaguchi, H.5
Shinzawa-Itoh, K.6
Nakashima, R.7
Yaono, R.8
Yoshikawa, S.9
-
48
-
-
0028083666
-
The heme-copper oxidase family consists of three distinct types of terminal oxidases and is related to nitric oxide reductase
-
Vanderoost, J., Deboer, A. and Degier, J. (1994) The heme-copper oxidase family consists of three distinct types of terminal oxidases and is related to nitric oxide reductase. FEMS Microbiol. Lett. 121, 1-9.
-
(1994)
FEMS Microbiol. Lett
, vol.121
, pp. 1-9
-
-
Vanderoost, J.1
Deboer, A.2
Degier, J.3
-
49
-
-
18144447465
-
Redox-coupled crystal structural changes in bovine heart cytochrome c oxidase
-
Yhosikawa, S., Shinzawa-Itoh, K., Nakashima, R., Yaono, R., Yamashita, E., Inoue, N., Yao, M., Fei, M. J., Libeu, C. P., Mizushima, T., Yamaaguchi, H., Tomizaki, T. and Tshukihara, T. (1998) Redox-coupled crystal structural changes in bovine heart cytochrome c oxidase. Science 280, 1723-1729.
-
(1998)
Science
, vol.280
, pp. 1723-1729
-
-
Yhosikawa, S.1
Shinzawa-Itoh, K.2
Nakashima, R.3
Yaono, R.4
Yamashita, E.5
Inoue, N.6
Yao, M.7
Fei, M.J.8
Libeu, C.P.9
Mizushima, T.10
Yamaaguchi, H.11
Tomizaki, T.12
Tshukihara, T.13
-
50
-
-
0034640504
-
Proton pumping by cytochrome oxidase: Progress, problems and postulates
-
Zaslavsky, D. and Gennis, R. B. (2000) Proton pumping by cytochrome oxidase: progress, problems and postulates. Biochim. Biophys. Acta 1458, 164-179.
-
(2000)
Biochim. Biophys. Acta
, vol.1458
, pp. 164-179
-
-
Zaslavsky, D.1
Gennis, R.B.2
|