Characteristics of Gloeophyllum trabeum alcohol oxidase, an extracellular source of H2O2 in brown rot decay of wood

Applied and Environmental Microbiology

Volumn 73, Issue 19, 2007, Pages 6241-6253

  Daniel, Geoffrey ^a   Volc, Jindřich ^b   Filonova, Lada ^a   Plíhal, Ondřej ^b   Kubátová, Elena ^b   Halada, Petr ^b  

^a SWEDISH UNIVERSITY OF AGRICULTURAL SCIENCES   (Sweden)

^b INSTITUTE OF MICROBIOLOGY   (Czech Republic)

Author keywords

[No Author keywords available]

Indexed keywords

AMINO ACIDS; COTTON FIBERS; DNA; ELECTRON MICROSCOPY; MOLECULAR MASS; POLYPEPTIDES; PROTEINS;

ALCOHOL OXIDASE (AOX); BROWN ROT DECAY OF WOOD; FLAVIN ADENINE DINUCLEOTIDE; GLOEOPHYLLUM TRABEUM ALCOHOL OXIDASE; MYCELIAL PELLETS;

FUNGI;

ALCOHOL OXIDASE; COMPLEMENTARY DNA; HYDROGEN PEROXIDE; HYDROXYL RADICAL; POLYCLONAL ANTIBODY;

DNA; ENZYME; FUNGAL DISEASE; HYDROGEN PEROXIDE; PEPTIDE; TRANSMISSION ELECTRON MICROSCOPY;

AMINO ACID SEQUENCE; ARTICLE; BASIDIOMYCETES; BROWN ROT; CELL WALL; ENZYME ACTIVITY; ENZYME MECHANISM; FUNGAL METABOLISM; GLOEOPHYLLUM TRABEUM; IMMUNOGOLD ELECTRON MICROSCOPY; NONHUMAN; NUCLEOTIDE SEQUENCE; OPEN READING FRAME; TRANSMISSION ELECTRON MICROSCOPY; WOOD;

ALCOHOL OXIDOREDUCTASES; BASIDIOMYCOTA; BIODEGRADATION, ENVIRONMENTAL; HYDROGEN PEROXIDE; LIGNIN; PLANT DISEASES; WOOD;

AMINO ACIDS; BROWN ROT FUNGI; COTTON; ELECTRON MICROSCOPES; FUNGI; NUCLEIC ACIDS; PROTEINS;

GLOEOPHYLLUM TRABEUM; GOSSYPIUM HIRSUTUM;

EID: 35148832513     PISSN: 00992240     EISSN: None     Source Type: Journal    
DOI: 10.1128/AEM.00977-07     Document Type: Article

References (60)

1. Ander, P., and K. E. Eriksson. 1985. Methanol formation during lignin degradation by Phanerochaete chrysosporium. Appl. Microbiol. Biotechnol. 21:96-102.
2. Barrasa, J. M., A. Gutiérrez, V. Escaso, F. Guillén, M. J. Martinez, and A. T. Martinez. 1998. Electron and fluorescence microscopy of extracellular glucan and aryl-alcohol oxidase during wheat-straw degradation by Pleurotus eryngii. Appl. Environ. Microbiol. 64:325-332.
3. Bringer, S., B. Sprey, and H. Sham. 1979. Purification and properties of alcohol oxidase from Poria contigua. Eur. J. Biochem. 101:563-570.
4. Canton, F. R., M. F. Suarez, M. Jose-Estanyol, and F. M. Canovas. 1999. Expression analysis of a cytosolic glutamine synthetase gene in cotyledons of Scots pine seedlings: developmental, light regulation and spatial distribution of specific transcripts. Plant Mol. Biol. 40:623-634.
5. Cohen, R., M. R. Suzuki, and K. E. Hammel. 2004. Differential stress-induced regulation of two quinone reductases in the brown-rot basidiomycete Gloeophyllum trabeum. Appl. Environ. Microbiol. 70:324-331.
6. Daniel, G. 1994. Use of electron microscopy for aiding our understanding of wood biodegradation. FEMS Microbiol. Rev. 13:199-233.
7. 2 during wood degradation by Phanerochaete chrysosporium, Trametes versicolor, and Oudemansiella mucida. Appl. Environ. Microbiol. 60:2524-2532.
8. 2-producing enzyme pyranose oxidase in Phanerochaete chrysosporium grown under liquid culture conditions. Appl. Environ. Microbiol. 58:3667-3676.
9. Daniel, G., J. Volc, and M.-L. Niku-Paavola. 2004. Cryo-FE-SEM and TEM immuno-techniques reveal new details for understanding white rot decay of lignocellulose. C. R. Biol. 327:861-871.
10. Daniel, G., T. Nilsson, and B. Pettersson. 1989. Intra- and extracellular localization of lignin peroxidase during degradation of solid wood and wood fragments by Phanerochaete chrysosporium by using transmission electron microscopy and immunogold labeling. Appl. Environ. Microbiol. 55:871-881.
11. Danneel, H.-J., A. Reichert, and F. Giffhorn. 1994. Production, purification and characterization of an alcohol oxidase of the ligninolytic fungus Peniophora gigantea. J. Biotechnol. 33:33-41.
12. Eckhardt, A. E., C. E. Hayes, and J. Goldstein. 1976. A sensitive fluorescent method fort he detection of glycoprotein in Polyacrylamide gels. Anal. Biochem. 73:192-197.
13. Enoki, A., S. Itakura, and H. Tanaka. 1997. The involvement of extracellular substances for reducing molecular oxygen to hydroxyl radical and ferric iron to ferrous iron in wood degradation by wood decay fungi. I. Biotechnol. 53:265-272.
14. Eriksson, K. E., and A. Nishida. 1988. Methanol oxidase of Phanerochaete chrysosporium. Methods Enzymol. 161:322-326.
15. Eriksson, K.-E., R. A. Blanchette, and P. Ander. 1990. Microbial and enzymatic degradation of wood and wood components, p. 407. In Springer series in wood science. Springer, Berlin, Germany.
16. Filley, T. R., G. D. Cody, B. Goodell, J. Jellison, C. Noser, and A. Ostrofsky. 2002. Lignin demethylation and polysaccharide decomposition in spruce sapwood degraded by brown rot fungi. Org. Geochem. 33:111-124.
17. Foisner, R., K. Messner, H. Stachelberger, and M. Röhr. 1985. Wood decay by basidiomycetes: extracellular tripartite membranous structures. Trans. Br. Mycol. Soc. 85:257-266.
18. Goodell, B. 2003. Brown-rot fungal degradation of wood: our evolving view, p. 97-119. In B. Goodell, D. D. Nicholas, and T. P. Schultz (ed.), Wood deterioration and preservation: advances in our changing world. ACS series 845. ACS, Washington, DC.
19. Goodell, B., J. Jellison, J. Liu, G. Daniel, A. Paszczynski, F. Fekete, S. Krishnamurty, L. Jun, and G. Xu. 1997. Low molecular weight chelators and phenolic compounds isolated from wood decay and their role in the fungal biodegradation of wood. J. Biotechnol. 53:133-162.
20. Goodman, J. M., C. W. Scott, P. W. Donahue, and J. P. Atheron. 1984. Alcohol oxidase assembles post-translation all into the peroxisome of Candida boidinii. J. Biol. Chem. 259:8485-8493.
21. Green, F., and T. L. Highley. 1997. Mechanism of brown rot decay: paradigm or paradox. Int. Biodeter. Biodegr. 39:113-124.
22. Green, F., M. J. Larsen, L. Murmanis, and T. L. Highley. 1992. Immunoscanning electron microscopic localization of extracellular polysaccharidases within the fibrillar sheath of the brown rot fungus Postia placenta. Can. J. Bot. 38:898-904.
23. Gunkel, K., R. van Dijk, M. Veenhuis, and I. J. van der Klei. 2004. Routing of Hansenula polymorpha alcohol oxidase: an alternative peroxisomal protein-sorting machinery. Mol. Biol. Cell 15:1347-1355.
24. Hallivell, B., and J. M. C. Gutteridge. 1999. Free radicals in biology and medicine, 3rd ed. Oxford University Press, Oxford, United Kingdom.
25. Hammel, K. E., R. Cohen, and M. R. Suzuki. 2004. Biodegradative activities expressed by the brown rot basidiomycete Gloeophyllum trabeum on crystalline cellulose, p. 87-88. Ninth International Conference on Biotechnology in the Pulp and Paper Industry, Durban, South Africa.
26. Highley, T. L., L. Murmanis, and J. G. Palmer. 1983. Electron microscopy of cellulose decomposition by brown rot fungi. Holzforschung 37:271-277.
27. Holzmann, K., E. Schreiner, and H. Schwalb. 2002. A Penicillium chrysogenum gene (aox) identified by specific induction upon shifting pH encodes for a protein which shows high homology to fungal alcohol oxidases. Curr. Genet. 40:339-344.
28. Hyde, S. M., and P. Wood. 1997. A mechanism for production of hydroxyl radicals by the brown-rot fungus Coniophora puteana: Fe(III) reduction by cellobiose dehydrogenase and Fe(II) oxidation at a distance from the hyphae. Microbiology 143:259-266.
29. Janssen, F. W., and W. Ruelius. 1968. Alcohol oxidase, a flavoprotein from several basidiomycete species: crystallization by fractional precipitation with polyethylene glycol. Biochim. Biophys. Acta 151:330-342.
30. Jensen, Jr., K. A., C. J. Houtman, Z. C. Ryan, and K. E. Hammel. 2001. Pathways for extracellular Fenton chemistry in the brown rot basidiomycete Gloeophyllum trabeum. Appl. Environ. Microbiol. 67:2705-2711.
31. Jensen, K. A., Jr., Z. C. Ryan, A. V. Wymelenberg, D. Cullen, and K. E. Hammel. 2002. An NADH:quinone oxidoreductase active during biodegradation by the brown-rot basidiomycete Gloeophyllum trabeum. Appl. Environ. Microbiol. 68:2699-2703.
32. Kerem, Z., K. A. Jensen, Jr., and K. E. Hammel. 1999. Biodegradative mechanisms of the brown rot basidiomycete Gloeophyllum trabeum: evidence for an extracellular hydroquinone-driven Fenton reaction. FEBS Lett. 446: 49-54.
33. 2-producing enzyme from the lignin-degrading basidiomycete Phanerochaete chrysosporium. Proc. Natl. Acad. Sci. USA 90:7411-7413.
34. Kerwin, R. M., and H. W. Ruelius. 1969. Production of alcohol oxidase by several basidiomycetes. Appl. Microbiol. 17:347-351.
35. Kirk, T. K., R. Ibach, M. D. Mozuch, A. H. Conner, and T. L. Highley. 1991. Characteristics of cotton cellulose depolymerized by a brown-rot fungus, by acid, or chemical oxidants. Holzforschung 45:230-244.
36. Ko, H.-S., Y. Yokoyama, N. Ohno, M. Okadome, S. Amachi, H. Shinoyama, and T. Fujii. 2005. Purification and characterization of intracellular and extracellular, thermostable and alkali-tolerant alcohol oxidases produced by a thermophilic fungus, Thermoascus aurantiacus NBRC 31693. J. Biosci. Bioeng. 99:348-353.
37. Koenigs, J. W. 1974. Hydrogen peroxide and iron: a proposed system for decomposition of wood by brown-rot basidiomycetes. Wood Fiber Sci. 6:66-79.
38. Ledeboer, A. M., L. Edens, J. Maat, C. Visser, J. W. Bos, and C. T. Verrips. 1985. Molecular cloning and characterization of a gene coding for methanol oxidase in Hansenula polymorpha. Nucleic Acids Res. 13:3063-3082.
39. Merz, J. H., and W. A. Waters. 1949. Some oxidations involving the free hydroxyl radical. J. Chem. Soc. 1949:15S-25S.
40. Micales, J. A., A. L. Richter, and T. L. Highley. 1990. Extracellular glucan production by Postia (=Poria) placenta. Mater. Org. 24:259-269.
41. Newcombe, D., A. Paszczynski, W. Gajewska, M. Kroger, G. Feis, and R. Crawford. 2002. Production of small molecular weight catalysts and the mechanism of trinitrotoluene degradation by several Gloeophyllum species. Enzyme Microb. Technol. 30:506-517.
42. Nicole, M., H. Chamberland, D. Rioux, N. Lecours, B. Rio, J. P. Geiger, and G. B. Quellette. 1993. A cytochemical study of extracellular sheaths associated with Rigidoporus lignosus during wood decay. Appl. Environ. Microbiol. 59:2578-2588.
43. 2-producing enzyme in Phanerochaete chrysosporium. Biotechnol. Appl. Biochem. 9:325-338.
44. Ozimek, P., M. Veenhuis, and I. J. van der Klei. 2005. Alcohol oxidase: a complex peroxisomal, oligomeric flavoprotein. FEMS Yeast Res. 5:975-983.
45. Paszczynski, A., R. Crawford, D. Funk, and B. Goodell. 1999. De novo synthesis of 4,5-dimethoxycatechol and 2,5-dimethoxyhydroquinone by the brown rot fungus Gloeophyllum trabeum. Appl. Environ. Microbiol. 65:674-679.
46. Ruel, K., and J.-P. Joseleau. 1991. Involvement of an extracellular glucan sheath during degradation of Populus wood by Phanerochaete chrysosporium. Appl. Environ. Microbiol. 57:374-384.
47. Schlosser, D., K. Fahr, W. Karl, and H.-G. Wetzstein. 2000. Hydroxylated metabolites of 2,4-dichlorophenol imply a Fenton-type reaction in Gloeophyllum striatum. Appl. Environ. Microbiol. 66:2479-2483.
48. Segers, G., N. Bradshaw, D. Archer, K. Blissett, and R. P. Oliver. 2001. Alcohol oxidase is a novel pathogenicity factor for Cladosporium fulvum, but aldehyde dehydrogenase is dispensable. Mol. Plant-Microbe Interact. 14:367-377.
49. Soldevila, A. I., and S. A. Ghabrial. 2001. A novel alcohol oxidase/RNA-binding protein with affinity for mycovirus double-stranded RNA from the filamentous fungus Helminthosporium (Cochliobolus) victoriae: molecular and functional characterization. J. Biol. Chem. 276:4652-4661.
50. Suzuki, M. R., C. G. Hunt, C. J. Houtman, Z. D. Dalebroux, and K. E. Hammel. 2006. Fungal hydroquinones contribute to brown rot of wood. Environ. Microbiol. 8:2214-2223.
51. Szamecz, B., G. Urbán, R. Rubiera, J. Kucsera, and L. Dorgai. 2005. Identification of four alcohol oxidases from methylotropic yeasts. Yeast 22:669-676.
52. Varela, E., and M. Tien. 2003. Effect of pH and oxalate on hydroquinone-derived hydroxyl radical formation during brown rot wood degradation. Appl. Environ. Microbiol. 69:6025-6031.
53. Wang, W., and P. J. Gao. 2002. A peptide-mediated and hydroxyl radical HO·-involved oxidative degradation of cellulose by brown-rot fungi. Biodegradation 13:383-394.
54. Wang, W., and P. J. Gao. 2003. Function and mechanism of a low-molecular-weight peptide produced by Gloeophyllum trabeum in biodegradation of cellulose. J. Biotechnol. 101:119-130.
55. Waterham, H. R., K. A. Russell, Y. Vries, and J. M. Cregg. 1997. Peroxisomal targeting, import, and assembly of alcohol oxidase in Pichia pastoris. J. Cell Biol. 139:1419-1431.
56. Werner, W., H. G. Rey, and H. Z. Wielinger. 1970. Über die Eigenschaften eines neuen Chromogens für die Blutzuckerbestimmung nach der GOD/POD Methode. Z. Anal. Chem. 252:224-228.
57. Wierenga, R. K., P. Terpstra, and W. G. Hol. 1986. Prediction of the occurrence of the ADP-binding βαβ-fold in proteins, using an amino acid sequence fingerprint. J. Mol. Biol. 187:101-107.
58. Xu, G., and B. Goodell. 2001. Mechanisms of wood degradation by brown-rot fungi: chelator-mediated cellulose degradation and binding of iron by cellulose. J. Biotechnol. 87:43-57.
59. Yphantis, D. A. 1964. Equilibrium ultracentrifugation of dilute solutions. Biochemistry 3:297-317.
60. Yomo, T., I. Urabe, and H. Okada. 1989. Enzymatic method for measuring the absolute values of oxygen concentration. Anal. Biochem. 179:124-126.