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Volumn 3242, Issue , 2004, Pages 302-311

An evolutionary algorithm for the maximum weight trace formulation of the multiple sequence alignment problem

Author keywords

[No Author keywords available]

Indexed keywords

ALGORITHMS; EVOLUTIONARY ALGORITHMS; HEURISTIC ALGORITHMS;

EID: 35048851504     PISSN: 03029743     EISSN: 16113349     Source Type: Book Series    
DOI: 10.1007/978-3-540-30217-9_31     Document Type: Article
Times cited : (5)

References (13)
  • 3
    • 85010105210 scopus 로고
    • The maximum weight trace problem in multiple sequence alignment
    • Proceedings of the 4th Symposium on Combinatorial Pattern Matching, Springer
    • J.D. Kececioglu. The maximum weight trace problem in multiple sequence alignment. In Proceedings of the 4th Symposium on Combinatorial Pattern Matching, number 684 in LNCS, pages 106-119. Springer, 1993.
    • (1993) LNCS , vol.684 , pp. 106-119
    • Kececioglu, J.D.1
  • 6
    • 0014757386 scopus 로고
    • A general method applicable to the search for similarities in the amino acid sequence of two proteins
    • S. Needleman and C. Wunsch. A general method applicable to the search for similarities in the amino acid sequence of two proteins. J. Mol. Biol., 48:443-453, 1970.
    • (1970) J. Mol. Biol. , vol.48 , pp. 443-453
    • Needleman, S.1    Wunsch, C.2
  • 7
    • 0036208872 scopus 로고    scopus 로고
    • Recent progresses in multiple sequence alignment: A survey
    • C. Notredame. Recent progresses in multiple sequence alignment: A survey. Pharmacogenomics, 3(1):131-144, 2002.
    • (2002) Pharmacogenomics , vol.3 , Issue.1 , pp. 131-144
    • Notredame, C.1
  • 8
    • 0029872694 scopus 로고    scopus 로고
    • SAGA: Sequence alignment by genetic algorithm
    • C. Notredame and D.G. Higgins. SAGA: Sequence alignment by genetic algorithm. Nucleic Acids Research, 24(8):1515-1524, 1996.
    • (1996) Nucleic Acids Research , vol.24 , Issue.8 , pp. 1515-1524
    • Notredame, C.1    Higgins, D.G.2
  • 9
    • 0034623005 scopus 로고    scopus 로고
    • T-COFFEE: A novel method for fast and accurate multiple sequence alignment
    • C. Notredame, D.G. Higgins, and J. Heringa. T-COFFEE: A novel method for fast and accurate multiple sequence alignment. J. Mol. Biol., 392:205-217, 2000.
    • (2000) J. Mol. Biol. , vol.392 , pp. 205-217
    • Notredame, C.1    Higgins, D.G.2    Heringa, J.3
  • 10
    • 0031829993 scopus 로고    scopus 로고
    • COFFEE: An objective function for multiple sequence alignment
    • C. Notredame, L. Holm, and D.G. Higgins. COFFEE: An objective function for multiple sequence alignment. Bioinformatics, 14(5):407-422, 1998.
    • (1998) Bioinformatics , vol.14 , Issue.5 , pp. 407-422
    • Notredame, C.1    Holm, L.2    Higgins, D.G.3
  • 11
    • 0032988850 scopus 로고    scopus 로고
    • BAliBASE: A benchmark alignments database for the evaluation of multiple sequence alignment programs
    • J. Thompson, F. Plewniak, and O. Poch. BAliBASE: A benchmark alignments database for the evaluation of multiple sequence alignment programs. Bioinformatics, 15:87-88, 1999.
    • (1999) Bioinformatics , vol.15 , pp. 87-88
    • Thompson, J.1    Plewniak, F.2    Poch, O.3
  • 12
    • 0027968068 scopus 로고
    • CLUSTAL W: Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position specific gap penalties and weight matrix choice
    • J.D. Thompson, D.G. Higgins, and T.J. Gibson. CLUSTAL W: Improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position specific gap penalties and weight matrix choice. Nucleic Acids Research, 22(22) :4673-4680, 1994.
    • (1994) Nucleic Acids Research , vol.22 , Issue.22 , pp. 4673-4680
    • Thompson, J.D.1    Higgins, D.G.2    Gibson, T.J.3
  • 13
    • 0031461056 scopus 로고    scopus 로고
    • A genetic algorithm for multiple molecular sequence alignment
    • C. Zhang and A.K.C. Wong. A genetic algorithm for multiple molecular sequence alignment. CABIOS, 13(6):565-581, 1997.
    • (1997) CABIOS , vol.13 , Issue.6 , pp. 565-581
    • Zhang, C.1    Wong, A.K.C.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.