-
1
-
-
0028946084
-
Phylogenetic identification and in situ detection of individual microbial cells without cultivation
-
Amann, R.I., Ludwig, W. Schleifer, K.H. (1995) Phylogenetic identification and in situ detection of individual microbial cells without cultivation. Microbiol Rev 59, 143 169.
-
(1995)
Microbiol Rev
, vol.59
, pp. 143-169
-
-
Amann, R.I.1
Ludwig, W.2
Schleifer, K.H.3
-
2
-
-
0025294528
-
Combination of 16S rRNA-targeted oligonucleotide probes with flow cytometry for analyzing mixed microbial populations
-
Amann, R.I., Binder, B.J., Olson, R.J., Chisholm, S.W., Devereux, R. Stahl, D.A. (1990) Combination of 16S rRNA-targeted oligonucleotide probes with flow cytometry for analyzing mixed microbial populations. Appl Environ Microbiol 56, 1919 1926.
-
(1990)
Appl Environ Microbiol
, vol.56
, pp. 1919-1926
-
-
Amann, R.I.1
Binder, B.J.2
Olson, R.J.3
Chisholm, S.W.4
Devereux, R.5
Stahl, D.A.6
-
3
-
-
3042698850
-
Classification of lactic acid bacteria isolated from chigee and mare milk collected in Inner Mongolia
-
An, Y., Adachi, Y. Ogawa, Y. (2004) Classification of lactic acid bacteria isolated from chigee and mare milk collected in Inner Mongolia. Anim Sci J 75, 245 252.
-
(2004)
Anim Sci J
, vol.75
, pp. 245-252
-
-
An, Y.1
Adachi, Y.2
Ogawa, Y.3
-
4
-
-
0035169208
-
Direct in situ viability assessment of bacteria in probiotic dairy products using viability staining in conjunction with confocal scanning laser microscopy
-
Auty, M.A.E., Gardiner, G.E., McBearty, S.J., O'Sullivan, E.O., Mulvihill, D.M., Collins, J.K., Fitzgerald, G.F., Stanton, C., et al. (2001) Direct in situ viability assessment of bacteria in probiotic dairy products using viability staining in conjunction with confocal scanning laser microscopy. Appl Environ Microbiol 67, 420 425.
-
(2001)
Appl Environ Microbiol
, vol.67
, pp. 420-425
-
-
Auty, M.A.E.1
Gardiner, G.E.2
McBearty, S.J.3
O'Sullivan, E.O.4
Mulvihill, D.M.5
Collins, J.K.6
Fitzgerald, G.F.7
Stanton, C.8
-
5
-
-
0027410299
-
Development and use of a selective medium for isolation of Leuconostoc spp. from vegetables and dairy products
-
Benkerroum, N., Misbah, M., Sandine, W.E. Elaraki, A.T. (1993) Development and use of a selective medium for isolation of Leuconostoc spp. from vegetables and dairy products. Appl Environ Microbiol 59, 607 609.
-
(1993)
Appl Environ Microbiol
, vol.59
, pp. 607-609
-
-
Benkerroum, N.1
Misbah, M.2
Sandine, W.E.3
Elaraki, A.T.4
-
6
-
-
0032941406
-
Counting and size classification of active soil bacteria by fluorescence in situ hybridization with an rRNA oligonucleotide probe
-
Christensen, H., Hansen, M. Sørensen, J. (1999) Counting and size classification of active soil bacteria by fluorescence in situ hybridization with an rRNA oligonucleotide probe. Appl Environ Microbiol 65, 1753 1761.
-
(1999)
Appl Environ Microbiol
, vol.65
, pp. 1753-1761
-
-
Christensen, H.1
Hansen, M.2
Sørensen, J.3
-
7
-
-
0024507744
-
Phylogenetic stains: Ribosomal RNA-based probes for the identification of single cells
-
DeLong, E.F., Wickham, G.S. Pace, N.R. (1989) Phylogenetic stains: ribosomal RNA-based probes for the identification of single cells. Science 243, 1360 1363.
-
(1989)
Science
, vol.243
, pp. 1360-1363
-
-
Delong, E.F.1
Wickham, G.S.2
Pace, N.R.3
-
8
-
-
0025176875
-
Taxonomy of Leuconostoc species, particularly Leuconostoc oenos, as revealed by numerical analysis of total soluble cell protein patterns, DNA base compositions, and DNA-DNA hybridizations
-
Dicks, L.M.T., Van Vuuren, H.J.J. Dellaglio, F. (1990) Taxonomy of Leuconostoc species, particularly Leuconostoc oenos, as revealed by numerical analysis of total soluble cell protein patterns, DNA base compositions, and DNA-DNA hybridizations. Int J Syst Bacteriol 40, 83 91.
-
(1990)
Int J Syst Bacteriol
, vol.40
, pp. 83-91
-
-
Dicks, L.M.T.1
Van Vuuren, H.J.J.2
Dellaglio, F.3
-
9
-
-
0028230227
-
Reverse dot blot hybridization: A useful method for the direct identification of lactic acid bacteria in fermented food
-
Ehrmann, M., Ludwig, W. Schleifer, K.H. (1994) Reverse dot blot hybridization: a useful method for the direct identification of lactic acid bacteria in fermented food. FEMS Microbiol Lett 117, 143 150.
-
(1994)
FEMS Microbiol Lett
, vol.117
, pp. 143-150
-
-
Ehrmann, M.1
Ludwig, W.2
Schleifer, K.H.3
-
10
-
-
0026770619
-
Identification of Leuconostoc strains isolated from Argentine raw milk
-
Fantuzzi, L., Dicks, L.M.T., Du Toit, M., Reneiro, R., Bottazzi, V. Dellaglio, F. (1992) Identification of Leuconostoc strains isolated from Argentine raw milk. Syst Appl Microbiol 14, 229 234.
-
(1992)
Syst Appl Microbiol
, vol.14
, pp. 229-234
-
-
Fantuzzi, L.1
Dicks, L.M.T.2
Du Toit, M.3
Reneiro, R.4
Bottazzi, V.5
Dellaglio, F.6
-
11
-
-
0024392873
-
Nucleic acid homologies of some vancomycin-resistant Leuconostocs and description of Leuconostoc citreum sp. nov. and Leuconostoc pseudomesenteroides sp. nov
-
Farrow, J.A.E., Facklam, R.R. Collins, M.D. (1989) Nucleic acid homologies of some vancomycin-resistant Leuconostocs and description of Leuconostoc citreum sp. nov. and Leuconostoc pseudomesenteroides sp. nov. Int J Syst Bacteriol 39, 279 283.
-
(1989)
Int J Syst Bacteriol
, vol.39
, pp. 279-283
-
-
Farrow, J.A.E.1
Facklam, R.R.2
Collins, M.D.3
-
12
-
-
33745161045
-
Improved enumeration of lactic acid bacteria in mesophilic dairy starter cultures by using multiplex quantitative real-time PCR and flow cytometry-fluorescence in situ hybridization
-
Friedrich, U. Lenke, J. (2006) Improved enumeration of lactic acid bacteria in mesophilic dairy starter cultures by using multiplex quantitative real-time PCR and flow cytometry-fluorescence in situ hybridization. Appl Environ Microbiol 72, 4163 4171.
-
(2006)
Appl Environ Microbiol
, vol.72
, pp. 4163-4171
-
-
Friedrich, U.1
Lenke, J.2
-
13
-
-
8344249371
-
Molecular quantification of lactic acid bacteria in fermented milk products using real-time quantitative PCR
-
Furet, J.P., Quénée, P. Tailliez, P. (2004) Molecular quantification of lactic acid bacteria in fermented milk products using real-time quantitative PCR. Int J Food Microbiol 97, 197 207.
-
(2004)
Int J Food Microbiol
, vol.97
, pp. 197-207
-
-
Furet, J.P.1
Quénée, P.2
Tailliez, P.3
-
14
-
-
0033376051
-
A polyphasic approach towards the identification of strains belonging to Lactobacillus acidophilus and related species
-
Gancheva, A., Pot, B., Vanhonacker, K., Hoste, B. Kersters, K. (1999) A polyphasic approach towards the identification of strains belonging to Lactobacillus acidophilus and related species. Syst Appl Microbiol 22, 573 585.
-
(1999)
Syst Appl Microbiol
, vol.22
, pp. 573-585
-
-
Gancheva, A.1
Pot, B.2
Vanhonacker, K.3
Hoste, B.4
Kersters, K.5
-
15
-
-
0023958997
-
Phylogenetic group-specific oligodeoxynucleotide probes for identification of single microbial cells
-
Giovannoni, S.J., DeLong, E.F., Olsen, G.J. Pace, N.R. (1988) Phylogenetic group-specific oligodeoxynucleotide probes for identification of single microbial cells. J Bacteriol 170, 720 726.
-
(1988)
J Bacteriol
, vol.170
, pp. 720-726
-
-
Giovannoni, S.J.1
Delong, E.F.2
Olsen, G.J.3
Pace, N.R.4
-
16
-
-
14744294463
-
A review of conventional detection and enumeration methods for pathogenic bacteria in food
-
Gracias, K.S. McKillip, J.L. (2004) A review of conventional detection and enumeration methods for pathogenic bacteria in food. Can J Microbiol 50, 883 890.
-
(2004)
Can J Microbiol
, vol.50
, pp. 883-890
-
-
Gracias, K.S.1
McKillip, J.L.2
-
17
-
-
0038215544
-
Specific detection of Pseudomonas in milk by fluorescence in situ hybridization using ribosomal RNA directed probes
-
Gunasekera, T.S., Dorsch, M.R., Slade, M.B. Veal, D.A. (2003) Specific detection of Pseudomonas in milk by fluorescence in situ hybridization using ribosomal RNA directed probes. J Appl Microbiol 94, 936 945.
-
(2003)
J Appl Microbiol
, vol.94
, pp. 936-945
-
-
Gunasekera, T.S.1
Dorsch, M.R.2
Slade, M.B.3
Veal, D.A.4
-
18
-
-
0026581202
-
Detection of micro-organisms in soil after in situ hybridization with rRNA-targeted, fluorescently labelled oligonucleotides
-
Hahn, D., Amann, R.I., Ludwig, W., Akkermans, A.D.L. Schleifer, K.H. (1992) Detection of micro-organisms in soil after in situ hybridization with rRNA-targeted, fluorescently labelled oligonucleotides. J Gen Microbiol 138, 879 887.
-
(1992)
J Gen Microbiol
, vol.138
, pp. 879-887
-
-
Hahn, D.1
Amann, R.I.2
Ludwig, W.3
Akkermans, A.D.L.4
Schleifer, K.H.5
-
19
-
-
0033966699
-
Comparison of viable cell counts and fluorescence in situ hybridization using specific rRNA-based probes for the quantification of human fecal bacteria
-
Harmsen, H.J., Gibson, G.R., Elfferich, P., Raangs, G.C., Wildeboer-Veloo, A.C., Argaiz, A., Roberfroid, M.B. Welling, G.W. (2000) Comparison of viable cell counts and fluorescence in situ hybridization using specific rRNA-based probes for the quantification of human fecal bacteria. FEMS Microbiol Lett 183, 125 129.
-
(2000)
FEMS Microbiol Lett
, vol.183
, pp. 125-129
-
-
Harmsen, H.J.1
Gibson, G.R.2
Elfferich, P.3
Raangs, G.C.4
Wildeboer-Veloo, A.C.5
Argaiz, A.6
Roberfroid, M.B.7
Welling, G.W.8
-
20
-
-
0032782895
-
Development and validation of an automated, microscopy-based method for enumeration of groups of intestinal bacteria
-
Jansen, G.J., Wildeboer-Veloo, A.C.M., Tonk, R.H.J., Franks, A.H. Welling, G.W. (1999) Development and validation of an automated, microscopy-based method for enumeration of groups of intestinal bacteria. J Microbiol Methods 37, 215 221.
-
(1999)
J Microbiol Methods
, vol.37
, pp. 215-221
-
-
Jansen, G.J.1
Wildeboer-Veloo, A.C.M.2
Tonk, R.H.J.3
Franks, A.H.4
Welling, G.W.5
-
21
-
-
0000700427
-
Characterization of Leuconostoc isolates from commercial mixed strain mesophilic starter cultures
-
Johansen, E. Kibenich, A. (1992) Characterization of Leuconostoc isolates from commercial mixed strain mesophilic starter cultures. J Dairy Sci 75, 1186 1191.
-
(1992)
J Dairy Sci
, vol.75
, pp. 1186-1191
-
-
Johansen, E.1
Kibenich, A.2
-
22
-
-
0026691615
-
Rapid in situ hybridization technique using 16S rRNA segments for detecting and differentiating the closely related gram-positive organisms Bacillus polymixa and Bacillus macerans
-
Jurtshuk, R.J., Blick, M., Bresser, J., Fox, G.E. Jurtshuk, P. Jr. (1992) Rapid in situ hybridization technique using 16S rRNA segments for detecting and differentiating the closely related gram-positive organisms Bacillus polymixa and Bacillus macerans. Appl Environ Microbiol 58, 2571 2578.
-
(1992)
Appl Environ Microbiol
, vol.58
, pp. 2571-2578
-
-
Jurtshuk, R.J.1
Blick, M.2
Bresser, J.3
Fox, G.E.4
Jurtshuk Jr., P.5
-
23
-
-
0028976428
-
Survival and activity of Pseudomonas sp. strain B13 (FR1) in a marine microcosm determined by quantitative PCR and an rRNA-targeting probe and its effect on the indigenous bacterioplankton
-
Leser, T.D., Boye, M. Hendriksen, N.B. (1995) Survival and activity of Pseudomonas sp. strain B13 (FR1) in a marine microcosm determined by quantitative PCR and an rRNA-targeting probe and its effect on the indigenous bacterioplankton. Appl Environ Microbiol 61, 1201 1207.
-
(1995)
Appl Environ Microbiol
, vol.61
, pp. 1201-1207
-
-
Leser, T.D.1
Boye, M.2
Hendriksen, N.B.3
-
24
-
-
2542523843
-
ARB: A software environment for sequence data
-
Ludwig, W., Strunk, O., Westram, R., Richter, L., Meier, H., Kumar, Y., Buchner, A., Lai, T., et al. (2004) ARB: a software environment for sequence data. Nucleic Acids Res 32, 1363 1371.
-
(2004)
Nucleic Acids Res
, vol.32
, pp. 1363-1371
-
-
Ludwig, W.1
Strunk, O.2
Westram, R.3
Richter, L.4
Meier, H.5
Kumar, Y.6
Buchner, A.7
Lai, T.8
-
25
-
-
0039894089
-
Detection and identification of lactic acid bacteria in milk and industrial starter culture with fluorescently labeled rRNA-targeted peptide nucleic acid probes
-
Matte-Tailliez, O., Quénée, P., Cibik, R., van Opstal, J., Dessevre, F., Firmesse, O. Tailliez, P. (2001) Detection and identification of lactic acid bacteria in milk and industrial starter culture with fluorescently labeled rRNA-targeted peptide nucleic acid probes. Lait 81, 237 248.
-
(2001)
Lait
, vol.81
, pp. 237-248
-
-
Matte-Tailliez, O.1
Quénée, P.2
Cibik, R.3
Van Opstal, J.4
Dessevre, F.5
Firmesse, O.6
Tailliez, P.7
-
26
-
-
0343192453
-
Fluorescence in situ hybridization (FISH) for direct visualization of microorganisms
-
Moter, A. Göbel, U.B. (2000) Fluorescence in situ hybridization (FISH) for direct visualization of microorganisms. J Microbiol Methods 41, 85 112.
-
(2000)
J Microbiol Methods
, vol.41
, pp. 85-112
-
-
Moter, A.1
Göbel, U.B.2
-
27
-
-
22144436248
-
Application of multilocus sequence analysis (MLSA) for rapid identification of Enterococcus species based on rpoA and pheS genes
-
Naser, S.M., Thompson, F.L., Hoste, B., Gevers, D., Dawyndt, P., Vancanneyt, M. Swings, J. (2005) Application of multilocus sequence analysis (MLSA) for rapid identification of Enterococcus species based on rpoA and pheS genes. Microbiology 151, 2141 2150.
-
(2005)
Microbiology
, vol.151
, pp. 2141-2150
-
-
Naser, S.M.1
Thompson, F.L.2
Hoste, B.3
Gevers, D.4
Dawyndt, P.5
Vancanneyt, M.6
Swings, J.7
-
28
-
-
6844251856
-
Cheese
-
In. ed. Hui, Y.H. pp. Chichester, UK: VCH Publishers.
-
Nath, K.R. (1993) Cheese. In Dairy Science and Technology Handbook ed. Hui, Y.H. pp. 163 255. Chichester, UK : VCH Publishers.
-
(1993)
Dairy Science and Technology Handbook
, pp. 163-255
-
-
Nath, K.R.1
-
29
-
-
0345167137
-
Seven-hour fluorescence in situ hybridization technique for enumeration of Enterobactericeae in food and environmental water sample
-
Ootsubo, M., Shimizu, T., Tanaka, R., Sawabe, T., Tajima, K. Ezura, Y. (2003) Seven-hour fluorescence in situ hybridization technique for enumeration of Enterobactericeae in food and environmental water sample. J Appl Microbiol 95, 1182 1190.
-
(2003)
J Appl Microbiol
, vol.95
, pp. 1182-1190
-
-
Ootsubo, M.1
Shimizu, T.2
Tanaka, R.3
Sawabe, T.4
Tajima, K.5
Ezura, Y.6
-
30
-
-
0034630268
-
Problems associated with the direct viable count procedure applied to gram-positive bacteria
-
Regnault, B., Martin-Delautre, S. Patrick, A.D.G. (2000) Problems associated with the direct viable count procedure applied to gram-positive bacteria. Int J Food Microbiol 55, 281 284.
-
(2000)
Int J Food Microbiol
, vol.55
, pp. 281-284
-
-
Regnault, B.1
Martin-Delautre, S.2
Patrick, A.D.G.3
-
31
-
-
10044293038
-
Development of a rapid detection and enumeration method for thermophilic bacilli in milk powders
-
Rueckert, A., Ronimus, R.S. Morgan, H.W. (2005) Development of a rapid detection and enumeration method for thermophilic bacilli in milk powders. J Microbiol Methods 60, 155 167.
-
(2005)
J Microbiol Methods
, vol.60
, pp. 155-167
-
-
Rueckert, A.1
Ronimus, R.S.2
Morgan, H.W.3
-
32
-
-
0002290724
-
Nucleic acid hybridization studies on Leuconostoc and heterofermentative lactobacilli and description of Leuconostoc amelibiosum sp. nov
-
Schillinger, U., Holzapfel, W. Kandler, O. (1989) Nucleic acid hybridization studies on Leuconostoc and heterofermentative lactobacilli and description of Leuconostoc amelibiosum sp. nov. System Appl Microbiol 12, 48 55.
-
(1989)
System Appl Microbiol
, vol.12
, pp. 48-55
-
-
Schillinger, U.1
Holzapfel, W.2
Kandler, O.3
-
33
-
-
85153272478
-
Dairy microbiology and safety
-
In. ed. Fox, P.F. pp. New York: Elsevier Applied Science.
-
Vasavada, P.C. Cousin, M.A. (1987) Dairy microbiology and safety. In Cheese: Chemistry, Physics and Microbiology ed. Fox, P.F. pp. 179 188. New York : Elsevier Applied Science.
-
(1987)
Cheese: Chemistry, Physics and Microbiology
, pp. 179-188
-
-
Vasavada, P.C.1
Cousin, M.A.2
-
34
-
-
0000039983
-
Improved direct differentiation between Leuconostoc cremoris, Streptococcus lactis ssp. diacetylactis, and Streptococcus cremoris/ Streptococcus lactis on agar
-
Vogensen, F.K., Karst, T., Larsen, J.J., Kringelum, B., Ellekjaer, D. Waagner Nielsen, E. (1987) Improved direct differentiation between Leuconostoc cremoris, Streptococcus lactis ssp. diacetylactis, and Streptococcus cremoris/Streptococcus lactis on agar. Milchwissenschaft 42, 646.
-
(1987)
Milchwissenschaft
, vol.42
, pp. 646
-
-
Vogensen, F.K.1
Karst, T.2
Larsen, J.J.3
Kringelum, B.4
Ellekjaer, D.5
Waagner Nielsen, E.6
-
35
-
-
0027299353
-
Probing activated sludge with oligonucleotides specific for proteobacteria: Inadequacy of culture-dependent methods for describing microbial community structure
-
Wagner, M., Amann, R., Lemmer, H. Schleifer, K.H. (1993) Probing activated sludge with oligonucleotides specific for proteobacteria: inadequacy of culture-dependent methods for describing microbial community structure. Appl Environ Microbiol 59, 1520 1525.
-
(1993)
Appl Environ Microbiol
, vol.59
, pp. 1520-1525
-
-
Wagner, M.1
Amann, R.2
Lemmer, H.3
Schleifer, K.H.4
-
36
-
-
0029070337
-
Flow cytometric analysis of activated sludge with rRNA-targeted probes
-
Wallner, G., Erhart, R. Amann, R. (1995) Flow cytometric analysis of activated sludge with rRNA-targeted probes. Appl Environ Microbiol 61, 1859 1866.
-
(1995)
Appl Environ Microbiol
, vol.61
, pp. 1859-1866
-
-
Wallner, G.1
Erhart, R.2
Amann, R.3
-
37
-
-
0025366456
-
16S rRNA sequences reveal numerous uncultured microorganisms in a natural community
-
Ward, D.M., Weller, R. Bateson, M.M. (1990) 16S rRNA sequences reveal numerous uncultured microorganisms in a natural community. Nature 345, 63 65.
-
(1990)
Nature
, vol.345
, pp. 63-65
-
-
Ward, D.M.1
Weller, R.2
Bateson, M.M.3
|