Framework and practice of network-based studies for Chinese herbal formula

Journal of Chinese Integrative Medicine

Volumn 5, Issue 5, 2007, Pages 489-493

  Li, Shao ^a,b  

^a TSINGHUA UNIVERSITY   (China)

^b TSINGHUA NATIONAL LABORATORY FOR INFORMATION SCIENCE AND TECHNOLOGY   (China)

Author keywords

Bioinformatics; Material medica formulas; Systems biology; ZHENG (syndromes)

Indexed keywords

ANGIOGENESIS INHIBITOR; CHINESE DRUG; IMMUNOGLOBULIN ENHANCER BINDING PROTEIN; MITOGEN ACTIVATED PROTEIN KINASE;

ANGIOGENESIS; BIOINFORMATICS; CHINESE MEDICINE; COLD; DRUG FORMULATION; DRUG MECHANISM; DRUG POTENTIATION; DRUG RESEARCH; DRUG TARGETING; EDITORIAL; HEAT; HYPOTHALAMUS HYPOPHYSIS ADRENAL SYSTEM; MEDLINE; NEUROENDOCRINE SYSTEM; SYSTEMS BIOLOGY;

COMPUTATIONAL BIOLOGY; DIAGNOSIS, DIFFERENTIAL; DRUG COMBINATIONS; DRUG PRESCRIPTIONS; DRUGS, CHINESE HERBAL; HUMANS; MEDICINE, CHINESE TRADITIONAL; NEURAL NETWORKS (COMPUTER); SYSTEMS BIOLOGY;

EID: 34648827366     PISSN: 16721977     EISSN: None     Source Type: Journal    
DOI: 10.3736/jcim20070501     Document Type: Editorial

References (22)

1. Li S. The relationship between ZHENG in traditional Chinese medicine and the regulation of biological network. In: Zhou GZ. Facing the progresses of science & technology and social economy in the 21st century - The first annual science conference of China Association for Science and Technology. Beijing: China Science and Technology Press. 1999: 442. Chinese.
2. Li S, Wang YY, Ji L, et al. A discussion and case study of complexities in traditional Chinese medicine. Xi Tong Fang Zhen Xue Bao. 2002; 14(11): 1429-1431, 1442. Chinese with abstract in English.
3. Alon U. Biological networks: the tinkerer as an engineer. Science. 2003; 301(5641): 1866-1867.
4. Cai DF, Shen ZY. Cogitation of neuro-endocrine-immune network research in the field of integrated Chinese and Western medicine. Zhongguo Zhong Xi Yi Jie He Za Zhi. 1997; 17(7): 442-445. Chinese.
5. Liu DL. Regulation of molecular networks. Zhongguo Zhong Yi Ji Chu Yi Xue Za Zhi. 1997; 3(6): 1-5. Chinese.
6. Shen WX, Liu YM. Cytokine network and the effect of Chinese herbal medicine. Shi Jie Ke Xue Ji Shu - Zhong Yao Xian Dai Hua. 2000; 2(6): 24-27. Chinese.
7. Barabasi AL, Oltvai ZN. Network biology: understanding the cell's functional organization. Nat Rev Genet. 2004; 5(2): 101-113.
8. Stelzl U, Worm U, Lalowski M, et al. A human protein- protein interaction network: a resource for annotating the proteome. Cell. 2005; 122(6): 957-968.
9. Hood L, Heath JR, Phelps ME, et al. Systems biology and new technologies enable predictive and preventative medicine. Science. 2004; 306(5696): 640-643.
10. Cohen BD, Baker DA, Soderstrom C, et al. Combination therapy enhances the inhibition of tumor growth with the fully human anti-type 1 insulin-like growth factor receptor monoclonal antibody CP-751, 871. Clin Cancer Res. 2005; 11(5): 2063-2073.
11. Kitano H. Cancer as a robust system: implications for anticancer therapy. Nat Rev Cancer. 2004; 4(3): 227-235.
12. Folkman J. Angiogenesis in cancer, vascular, rheumatoid and other disease. Nat Med. 1995; 1(1): 27-31.
13. Jain RK. Normalization of tumor vasculature: an emerging concept in antiangiogenic therapy. Science. 2005; 307(5706): 58-62.
14. Li S, Wang YY. Preliminary study on theoretical system of syndrome differentiation treatment of rheumatoid arthritis from "collaterals". Zhong Yi Za Zhi. 2002; 43 (2): 85-88. Chinese.
15. Li S, Zhang ZQ, Wu LJ, et al. Understanding ZHENG in traditional Chinese medicine in the context of neuro-endocrine-immune network. IET Syst Biol. 2007; 1 (1): 51-60.
16. Li S, Wu LJ, Zhang ZQ. Constructing biological networks through combined literature mining and microarray analysis: a LMMA approach. Bioinformatics. 2006; 22(7): 2143-2150.
17. Li S, Wu M. An herbal-compound combination with synergy effects for the treatment of angiogenesis related diseases (an invention patent). 200610114226. X. Chinese.
18. Li S, Lu A, Li B, et al. Circadian rhythms on hypothalamic-pituitary-adrenal axis hormones and cytokines of collagen induced arthritis in rats. J Autoimmun. 2004; 22(4): 277-285.
19. Li S, Fang YH. Modelling circadian rhythms of protein KaiA, KaiB and KaiC interactions in cyanobacteria. Biol Rhythm Res. 2007; 38(1): 43-53.
20. Zhuang Y, Li S, Li Y. dbNEI: a specific database for neuro-endocrine-immune interactions. Neuro Endocrinol Lett. 2006; 27(1/ 2): 53-59.
21. Li S, Lu AP, Wang YY, et al. Suppressive effects of a Chinese herbal medicine Qing-Luo-Yin extract on the angiogenesis of collagen induced arthritis in rats. Am J Chin Med. 2003; 31(5): 713-720.
22. Fan TP, Yeh JC, Leung KW, et al. Angiogenesis: from plants to blood vessels. Trends Pharmacol Sci. 2006; 27(6): 297-309.