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Volumn 45, Issue 9, 2007, Pages 3015-3021

Development of a real-time fluorescence resonance energy transfer PCR to detect Arcobacter species

Author keywords

[No Author keywords available]

Indexed keywords

QUINOLONE; RNA 16S;

EID: 34548703562     PISSN: 00951137     EISSN: None     Source Type: Journal    
DOI: 10.1128/JCM.00256-07     Document Type: Article
Times cited : (42)

References (44)
  • 1
    • 33947243522 scopus 로고    scopus 로고
    • Nucleotide sequence of the gyrA gene of Arcobacter species and characterization of human ciprofloxacin resistant clinical isolates
    • Abdelbaqi, K., A. Ménard, V. Prouzet-Mauleon, F. Bringaud, P. Lehours, and F. Mégraud. 2007. Nucleotide sequence of the gyrA gene of Arcobacter species and characterization of human ciprofloxacin resistant clinical isolates. FEMS Immunol. Med. Microbiol. 49:337-345.
    • (2007) FEMS Immunol. Med. Microbiol , vol.49 , pp. 337-345
    • Abdelbaqi, K.1    Ménard, A.2    Prouzet-Mauleon, V.3    Bringaud, F.4    Lehours, P.5    Mégraud, F.6
  • 3
    • 33746673950 scopus 로고    scopus 로고
    • Detection and diversity of various Arcobacter species in Danish poultry
    • Atabay, H. I., M. Waino, and M. Madsen. 2006. Detection and diversity of various Arcobacter species in Danish poultry. Int. J. Food Microbiol. 109:139-145.
    • (2006) Int. J. Food Microbiol , vol.109 , pp. 139-145
    • Atabay, H.I.1    Waino, M.2    Madsen, M.3
  • 4
    • 34548704045 scopus 로고    scopus 로고
    • Development of a multiplex and real time PCR assay for the specific detection of Arcobacter butzleri and Arcobacter cryaerophilus
    • Brightwell, G., E. Mowat, R. Clemens, J. Boerema, D. J. Pulford, and S. L. On. 2006. Development of a multiplex and real time PCR assay for the specific detection of Arcobacter butzleri and Arcobacter cryaerophilus. J. Microbiol. Methods 17:17.
    • (2006) J. Microbiol. Methods , vol.17 , pp. 17
    • Brightwell, G.1    Mowat, E.2    Clemens, R.3    Boerema, J.4    Pulford, D.J.5    On, S.L.6
  • 5
    • 0024297354 scopus 로고
    • Multiple sequence alignment with hierarchical clustering
    • Corpet, F. 1988. Multiple sequence alignment with hierarchical clustering. Nucleic Acids Res. 16:10881-10890.
    • (1988) Nucleic Acids Res , vol.16 , pp. 10881-10890
    • Corpet, F.1
  • 7
    • 24344510265 scopus 로고    scopus 로고
    • Discordant 16S and 23S rRNA gene phylogenies for the genus Helicobacter: Implications for phylogenetic inference and systematics
    • Dewhirst, F. E., Z. L. Shen, M. S. Scimeca, L. N. Stokes, T. Boumenna, T. T. Chen, B. J. Paster, and J. G. Fox. 2005. Discordant 16S and 23S rRNA gene phylogenies for the genus Helicobacter: implications for phylogenetic inference and systematics. J. Bacteriol. 187:6106-6118.
    • (2005) J. Bacteriol , vol.187 , pp. 6106-6118
    • Dewhirst, F.E.1    Shen, Z.L.2    Scimeca, M.S.3    Stokes, L.N.4    Boumenna, T.5    Chen, T.T.6    Paster, B.J.7    Fox, J.G.8
  • 8
    • 19544375446 scopus 로고    scopus 로고
    • Arcobacter halophilus sp. nov., the first obligate halophile in the genus Arcobacter
    • Donachie, S. P., J. P. Bowman, S. L. On, and M. Alam. 2005. Arcobacter halophilus sp. nov., the first obligate halophile in the genus Arcobacter. Int. J. Syst. Evol. Microbiol. 55:1271-1277.
    • (2005) Int. J. Syst. Evol. Microbiol , vol.55 , pp. 1271-1277
    • Donachie, S.P.1    Bowman, J.P.2    On, S.L.3    Alam, M.4
  • 9
    • 0017780632 scopus 로고
    • Isolation of Spirillum/Vibrio-like organisms from bovine fetuses
    • Ellis, W. A., S. D. Neill, J. J. O'Brien, H. W. Ferguson, and J. Hanna. 1977. Isolation of Spirillum/Vibrio-like organisms from bovine fetuses. Vet. Rec. 100:451-452.
    • (1977) Vet. Rec , vol.100 , pp. 451-452
    • Ellis, W.A.1    Neill, S.D.2    O'Brien, J.J.3    Ferguson, H.W.4    Hanna, J.5
  • 10
    • 0033986473 scopus 로고    scopus 로고
    • Prevalence of Campylobacter, Arcobacter, Helicobacter, and Sutterella spp. in hu man fecal samples as estimated by a reevaluation of isolation methods for Campylobacters
    • Engberg, J., S. L. On, C. S. Harrington, and P. Gerner-Smidt. 2000. Prevalence of Campylobacter, Arcobacter, Helicobacter, and Sutterella spp. in hu man fecal samples as estimated by a reevaluation of isolation methods for Campylobacters. J. Clin. Microbiol. 38:286-291.
    • (2000) J. Clin. Microbiol , vol.38 , pp. 286-291
    • Engberg, J.1    On, S.L.2    Harrington, C.S.3    Gerner-Smidt, P.4
  • 13
    • 0029926480 scopus 로고    scopus 로고
    • Identification of Arcobacter isolates by PCR
    • Harmon, K. M., and I. V. Wesley. 1996. Identification of Arcobacter isolates by PCR. Lett. Appl. Microbiol. 23:241-244.
    • (1996) Lett. Appl. Microbiol , vol.23 , pp. 241-244
    • Harmon, K.M.1    Wesley, I.V.2
  • 14
    • 33846447797 scopus 로고    scopus 로고
    • Isolation and characterization of the emerging foodborn pathogen Arcobacter from human stool
    • Houf, K., and R. Stephan. 2007. Isolation and characterization of the emerging foodborn pathogen Arcobacter from human stool. J. Microbiol. Methods 68:408-413.
    • (2007) J. Microbiol. Methods , vol.68 , pp. 408-413
    • Houf, K.1    Stephan, R.2
  • 15
    • 0034547262 scopus 로고    scopus 로고
    • Development of a multiplex PCR assay for the simultaneous detection and identification of Arcobacter butzleri, Arcobacter cryaerophilus, and Arcobacter skirrowii
    • Houf, K., A. Tutenel, L. De Zutter, J. Van Hoof, and P. Vandamme. 2000. Development of a multiplex PCR assay for the simultaneous detection and identification of Arcobacter butzleri, Arcobacter cryaerophilus, and Arcobacter skirrowii. FEMS Microbiol. Lett. 193:89-94.
    • (2000) FEMS Microbiol. Lett , vol.193 , pp. 89-94
    • Houf, K.1    Tutenel, A.2    De Zutter, L.3    Van Hoof, J.4    Vandamme, P.5
  • 16
    • 0030757926 scopus 로고    scopus 로고
    • A molecular scheme based on 23S rRNA gene polymorphisms for rapid identification of Campylobacter and Arcobacter species
    • Hurtado, A., and R. J. Owen. 1997. A molecular scheme based on 23S rRNA gene polymorphisms for rapid identification of Campylobacter and Arcobacter species. J. Clin. Microbiol. 35:2401-2404.
    • (1997) J. Clin. Microbiol , vol.35 , pp. 2401-2404
    • Hurtado, A.1    Owen, R.J.2
  • 18
    • 0037088891 scopus 로고    scopus 로고
    • One-step polymerase chain reaction-based typing of Arcobacter species
    • Kabeya, H., Y. Kobayashi, S. Maruyama, and T. Mikami. 2003. One-step polymerase chain reaction-based typing of Arcobacter species. Int. J. Food Microbiol. 81:163-168.
    • (2003) Int. J. Food Microbiol , vol.81 , pp. 163-168
    • Kabeya, H.1    Kobayashi, Y.2    Maruyama, S.3    Mikami, T.4
  • 19
    • 0033971219 scopus 로고    scopus 로고
    • Intrageneric relationships among Micromonospora species deduced from gyrB-based phylogeny and DNA relatedness
    • Kasai, H., T. Tamura, and S. Harayama. 2000. Intrageneric relationships among Micromonospora species deduced from gyrB-based phylogeny and DNA relatedness. Int. J. Syst. Evol. Microbiol. 50:127-134.
    • (2000) Int. J. Syst. Evol. Microbiol , vol.50 , pp. 127-134
    • Kasai, H.1    Tamura, T.2    Harayama, S.3
  • 21
    • 0036773804 scopus 로고    scopus 로고
    • Detection of Campylobacter species: A comparison of culture and polymerase chain reaction based methods
    • Kulkarni, S. P., S. Lever, J. M. Logan, A. J. Lawson, J. Stanley, and M. S. Shan. 2002. Detection of Campylobacter species: a comparison of culture and polymerase chain reaction based methods. J. Clin. Pathol. 55:749-753.
    • (2002) J. Clin. Pathol , vol.55 , pp. 749-753
    • Kulkarni, S.P.1    Lever, S.2    Logan, J.M.3    Lawson, A.J.4    Stanley, J.5    Shan, M.S.6
  • 22
    • 0036274375 scopus 로고    scopus 로고
    • Identification by 16S ribosomal RNA gene sequencing of Arcobacter butzleri bacteraemia in a patient with acute gangrenous appendicitis
    • Lau, S. K., P. C. Woo, J. L. Teng, K. W. Leung, and K. Y. Yuen. 2002. Identification by 16S ribosomal RNA gene sequencing of Arcobacter butzleri bacteraemia in a patient with acute gangrenous appendicitis. Mol. Pathol. 55:182-185.
    • (2002) Mol. Pathol , vol.55 , pp. 182-185
    • Lau, S.K.1    Woo, P.C.2    Teng, J.L.3    Leung, K.W.4    Yuen, K.Y.5
  • 23
    • 21244449998 scopus 로고    scopus 로고
    • Relevant aspects of Arcobacter spp. as potential foodborne pathogen
    • Lehner, A., T. Tasara, and R. Stephan. 2005. Relevant aspects of Arcobacter spp. as potential foodborne pathogen. Int. J. Food Microbiol. 102:127-135.
    • (2005) Int. J. Food Microbiol , vol.102 , pp. 127-135
    • Lehner, A.1    Tasara, T.2    Stephan, R.3
  • 25
    • 15944417528 scopus 로고    scopus 로고
    • Development of a real-time fluorescence resonance energy transfer PCR to identify the main pathogenic Campylobacter spp
    • Menard, A., F. Dachet, V. Prouzet-Mauléon, M. Oleastro, and F. Mégraud. 2005. Development of a real-time fluorescence resonance energy transfer PCR to identify the main pathogenic Campylobacter spp. Clin. Microbiol. Infect. 11:281-287.
    • (2005) Clin. Microbiol. Infect , vol.11 , pp. 281-287
    • Menard, A.1    Dachet, F.2    Prouzet-Mauléon, V.3    Oleastro, M.4    Mégraud, F.5
  • 26
    • 0037315734 scopus 로고    scopus 로고
    • Specific detection of Arcobacter and Campylobacter strains in water and sewage by PCR and fluorescent in situ hybridization
    • Moreno, Y., S. Botella, J. L. Alonso, M. A. Ferrus, M. Hernandez, and J. Hernandez. 2003. Specific detection of Arcobacter and Campylobacter strains in water and sewage by PCR and fluorescent in situ hybridization. Appl. Environ. Microbiol. 69:1181-1186.
    • (2003) Appl. Environ. Microbiol , vol.69 , pp. 1181-1186
    • Moreno, Y.1    Botella, S.2    Alonso, J.L.3    Ferrus, M.A.4    Hernandez, M.5    Hernandez, J.6
  • 27
    • 0028822023 scopus 로고
    • Isolation of Arcobacter butzleri from a neonate with bacteraemia
    • On, S. L., A. Stacey, and J. Smyth. 1995. Isolation of Arcobacter butzleri from a neonate with bacteraemia. J. Infect. 31:225-227.
    • (1995) J. Infect , vol.31 , pp. 225-227
    • On, S.L.1    Stacey, A.2    Smyth, J.3
  • 29
    • 34548665480 scopus 로고    scopus 로고
    • Roche Applied Science. 2001. LightCycler probe design software, version 1.0. Roche Applied Science, Mannheim, Germany
    • Roche Applied Science. 2001. LightCycler probe design software, version 1.0. Roche Applied Science, Mannheim, Germany.
  • 30
    • 0033990048 scopus 로고    scopus 로고
    • Primer3 on the WWW for general users and for biologist programmers
    • Rozen, S., and H. Skaletsky. 2000. Primer3 on the WWW for general users and for biologist programmers. Methods Mol. Biol. 132:365-386.
    • (2000) Methods Mol. Biol , vol.132 , pp. 365-386
    • Rozen, S.1    Skaletsky, H.2
  • 31
    • 34248372115 scopus 로고    scopus 로고
    • Prevalence of Campylobacter species, Helicobacter pylori and Arcobacter species in stool samples from the Venda region, Limpopo, South Africa: Studies using molecular diagnostic methods
    • Samie, A., C. L. Obi, L. J. Barrett, S. M. Powell, and R. L. Guerrant. 2007. Prevalence of Campylobacter species, Helicobacter pylori and Arcobacter species in stool samples from the Venda region, Limpopo, South Africa: studies using molecular diagnostic methods. J. Infect. 54:558-566.
    • (2007) J. Infect , vol.54 , pp. 558-566
    • Samie, A.1    Obi, C.L.2    Barrett, L.J.3    Powell, S.M.4    Guerrant, R.L.5
  • 32
    • 0030741576 scopus 로고    scopus 로고
    • Phylogenetic analysis and in situ identification of bacteria in activated sludge
    • Snaidr, J., R. Amann, I. Huber, W. Ludwig, and K. H. Schleifer. 1997. Phylogenetic analysis and in situ identification of bacteria in activated sludge. Appl. Environ. Microbiol. 63:2884-2896.
    • (1997) Appl. Environ. Microbiol , vol.63 , pp. 2884-2896
    • Snaidr, J.1    Amann, R.2    Huber, I.3    Ludwig, W.4    Schleifer, K.H.5
  • 34
    • 0025741614 scopus 로고
    • Isolation of group 2 aerotolerant Campylobacter species from Thai children with diarrhea
    • Taylor, D. N., J. A. Kiehlbauch, W. Tee, C. Pitarangsi, and P. Echeverria. 1991. Isolation of group 2 aerotolerant Campylobacter species from Thai children with diarrhea. J. Infect. Dis. 163:1062-1067.
    • (1991) J. Infect. Dis , vol.163 , pp. 1062-1067
    • Taylor, D.N.1    Kiehlbauch, J.A.2    Tee, W.3    Pitarangsi, C.4    Echeverria, P.5
  • 35
    • 0019505123 scopus 로고
    • Identification and localization of a gene that specifies production of Escherichia coli DNA topoisomerase I
    • Trucksis, M., and R. E. Depew. 1981. Identification and localization of a gene that specifies production of Escherichia coli DNA topoisomerase I. Proc. Natl. Acad. Sci. USA 78:2164-2168.
    • (1981) Proc. Natl. Acad. Sci. USA , vol.78 , pp. 2164-2168
    • Trucksis, M.1    Depew, R.E.2
  • 36
    • 0025960666 scopus 로고
    • Revision of Campylobacter, Helicobacter, and Wolinella taxonomy: Emendation of generic descriptions and proposal of Arcobacter gen. nov
    • Vandamme, P., E. Falsen, R. Rossau, B. Hoste, P. Segers, R. Tytgat, and J. De Ley. 1991. Revision of Campylobacter, Helicobacter, and Wolinella taxonomy: emendation of generic descriptions and proposal of Arcobacter gen. nov. Int. J. Syst. Bacteriol. 41:88-103.
    • (1991) Int. J. Syst. Bacteriol , vol.41 , pp. 88-103
    • Vandamme, P.1    Falsen, E.2    Rossau, R.3    Hoste, B.4    Segers, P.5    Tytgat, R.6    De Ley, J.7
  • 39
    • 14944384750 scopus 로고    scopus 로고
    • Prevalence, enumeration and strain variation of Arcobacter species in the faeces of healthy cattle in Belgium
    • Van Driessche, E., K. Houf, F. Vangroenweghe, L. De Zutter, and J. Van Hoof. 2005. Prevalence, enumeration and strain variation of Arcobacter species in the faeces of healthy cattle in Belgium. Vet. Microbiol. 105:149-154.
    • (2005) Vet. Microbiol , vol.105 , pp. 149-154
    • Van Driessche, E.1    Houf, K.2    Vangroenweghe, F.3    De Zutter, L.4    Van Hoof, J.5
  • 40
    • 0037470944 scopus 로고    scopus 로고
    • Assessment of the utilization of the antisense RNA strategy to identify essential genes in heterologous bacteria
    • Wang, B., and H. K. Kuramitsu. 2003. Assessment of the utilization of the antisense RNA strategy to identify essential genes in heterologous bacteria. FEMS Microbiol. Lett. 220:171-176.
    • (2003) FEMS Microbiol. Lett , vol.220 , pp. 171-176
    • Wang, B.1    Kuramitsu, H.K.2
  • 43
    • 0033764790 scopus 로고    scopus 로고
    • Phylogeny of the genus Pseudomonas: Intrageneric structure reconstructed from the nucleotide sequences of gyrB and rpoD genes
    • Yamamoto, S., H. Kasai, D. L. Arnold, R. W. Jackson, A. Vivian, and S. Harayama. 2000. Phylogeny of the genus Pseudomonas: intrageneric structure reconstructed from the nucleotide sequences of gyrB and rpoD genes. Microbiology 146:2385-2394.
    • (2000) Microbiology , vol.146 , pp. 2385-2394
    • Yamamoto, S.1    Kasai, H.2    Arnold, D.L.3    Jackson, R.W.4    Vivian, A.5    Harayama, S.6


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