High genetic variability of HIV-1 in female sex workers from Argentina

Retrovirology

Volumn 4, Issue , 2007, Pages

  Pando, María A ^a,b   Eyzaguirre, Lindsay M ^b   Carrion, Gladys ^c   Montano, Silvia M ^c   Sanchez, José L ^d   Carr, Jean K ^b   Avila, María M ^a,e  

^a UNIVERSIDAD DE BUENOS AIRES   (Argentina)

^b INSTITUTE OF HUMAN VIROLOGY   (United States)

^c Peru   (Peru)

^d WALTER REED ARMY INSTITUTE OF RESEARCH   (United States)

^e CONICET ^*  (Argentina)

Author keywords

[No Author keywords available]

Indexed keywords

ANTIRETROVIRUS AGENT; PROTEINASE; ANTI HUMAN IMMUNODEFICIENCY VIRUS AGENT;

ANTIBIOTIC RESISTANCE; ARGENTINA; ARTICLE; BLOOD SAMPLING; FEMALE; FEMALE WORKER; GENE AMPLIFICATION; GENETIC VARIABILITY; GENOTYPE; HOST RESISTANCE; HUMAN; HUMAN CELL; HUMAN IMMUNODEFICIENCY VIRUS 1; HUMAN IMMUNODEFICIENCY VIRUS 1 INFECTION; NONHUMAN; PERIPHERAL BLOOD MONONUCLEAR CELL; PHYLOGENY; PROSTITUTION; SEQUENCE ANALYSIS; SEROPREVALENCE; SEXUAL BEHAVIOR; VIRUS RECOMBINANT; VIRUS STRAIN; VIRUS TYPING; CLASSIFICATION; DISEASE TRANSMISSION; DNA SEQUENCE; DRUG EFFECT; ENVELOPE GENE; GENETIC RECOMBINATION; GENETICS; HETERODUPLEX ANALYSIS; HUMAN IMMUNODEFICIENCY VIRUS INFECTION; MUTATION; PREVALENCE; VIROLOGY;

HUMAN IMMUNODEFICIENCY VIRUS 1;

ANTI-HIV AGENTS; ARGENTINA; DRUG RESISTANCE, VIRAL; FEMALE; GENES, ENV; HETERODUPLEX ANALYSIS; HIV INFECTIONS; HIV-1; HUMANS; MUTATION; PHYLOGENY; PREVALENCE; PROSTITUTION; RECOMBINATION, GENETIC; SEQUENCE ANALYSIS, DNA; VARIATION (GENETICS);

EID: 34548569102     PISSN: None     EISSN: 17424690     Source Type: Journal    
DOI: 10.1186/1742-4690-4-58     Document Type: Article

References (24)

1. HIV Sequence Database Web Site Theoretical biology and biophysics Los Alamos National Laboratory http://hiv-web.lanl.gov Last accessed November 2006.
2. Avila MM Pando MA Carrion G Peralta LM Salomon H Carrillo MG Sanchez J Maulen S Hierholzer J Marinello M Negrete M Russell KL Carr JK Two HIV-1 epidemics in Argentina: Different genetic subtypes associated with different risk groups J Acquir Immune Defic Syndr 2002, 29:422-426 11917249
3. Espinosa A Vignoles M Carrillo MG Sheppard H Donovan R Peralta LM Rossi D Radulich G Salomon H Weissenbacher M Intersubtype BF Recombinants of HIV-1 in a Population of Injecting Drug Users in Argentina J Acquir Immune Defic Syndr 2004, 36:630-636 10.1097/00126334-200405010-00012 15097307
4. Carr JK Avila M Gomez Carrillo M Salomon H Hierholzer J Watanaveeradej V Pando MA Negrete M Russell KL Sanchez J Birx DL Andrade R Vinoles J McCutchan FE Diverse BF recombinants have spread widely since the introduction of HIV-1 into South America AIDS 2001, 15:F41-47 10.1097/ 00002030-200110190-00002 11600844
5. Dilernia DA Lourtau L Parlante A Losso M Salomón H Gomez Carrillo M Evidence of "non B-non BF" HIV-1 subtypes in newly diagnosed patients from Buenos Aires, Argentina 3rd IAS Conference on HIV Pathogenesis and Treatment. Rio de Janeiro, Brazil. July 24-27 2005 MoPe14.1B04.
6. Pando MA Eyzaguirre LM Segura M Bautista CT Marone R Ceballos A Montano SM Sanchez JL Weissenbacher M Avila MM Carr JK First report of an HIV-1 triple recombinant of subtypes B, C and F in Buenos Aires, Argentina Retrovirology 2006, 3:59 1570496 16959032 10.1186/1742-4690-3-59
7. 2006 Report on the global AIDS epidemic, UNAIDS, May 2006 http://www.unaids.org/en/Publications/default.asp
8. Pando MA Berini C Bibini M Fernández M Reinaga E Maulen S Marone R Biglione M Sánchez J Montano S Bautista CT Weissenbacher M Ávila MM Prevalence of HIV-1 and other sexually transmitted infections among female commercial sex workers in Argentina American Journal of Tropical Medicine & Hygiene 2006, 74:233=238
9. Delwart EL Shpaer EG Louwagie J McCutchan FE Grez M Rubsamen-Waigmann H Mullins JI Genetic relationships determined by a DNA heteroduplex mobility assay: Analysis of HIV-1 env genes Science 1993, 262:1257-61 10.1126/science.8235655 8235655
10. Carr JK Nadai Y Eyzaguirre L Saad MD Khakimov MM Yakubov SK Birx DL Graham RR Wolfe ND Earhart KC Sanchez JL Outbreak of a West African recombinant of HIV-1 in Tashkent, Uzbekistan J Acquir Immune Defic Syndr 2005, 39:570-575 16044009
11. Salminen MO Carr JK Burke DS McCutchan FE Identification of breakpoints in intergenotypic recombinants of HIV-1 by bootscanning AIDS Res Hum Retroviruses 1995, 11:1423-1425 8573403
12. Carr JK Salminen MO Koch C Gotte D Artenstein AW Hegerich PA St Louis D Burke DS McCutchan FE Full-length sequence and mosaic structure of a human immunodeficiency virus type 1 isolate from Thailand J Virol 1996, 70:5935-5943 190613 8709215
13. Smith SW Overbeek R Woese CR Gilbert W Gillevet PM The genetic data environment an expandable GUI for multiple sequence analysis Comput Appl Biosci 1994, 10(6):671-675 7704666
14. Kumar S Tamura K Jakobsen IB Nei M MEGA 2: Molecular evolutionary genetics analysis software Bioinformatics 2000, 17:1244-1245 10.1093/ bioinformatics/17.12.1244
15. Saitou N Nei M The neighbor joining method: A new method for reconstructing phylogenetic trees Mol Biol Evol 1987, 4:406-425 3447015
16. Lole KS Bollinger RC Paranjape RS Gadkari D Kulkarni SS Novak NG Ingersoll R Sheppard HW Ray SC Full length human immunodeficiency virus type 1 genomes from subtype C-infected seroconverters in India, with evidence of inter-subtype recombination Journal of Virology 1999, 73:152-160 103818 9847317
17. Montano SM Sanchez JL Laguna-Torres A Cuchi P Avila MM Weissenbacher M Serra M Vinoles J Russi JC Aguayo N Galeano AH Gianella A Andrade R Arredondo A Ramirez E Acosta ME Alava A Montoya O Guevara A Manrique H Sanchez JL Lama JR de la Hoz F Sanchez GI Ayala C Pacheco ME Carrion G Chauca G Perez JJ Negrete M Russell KL Bautista CT Olson JG Watts DM Birx DL Carr JK for the South American HIV Molecular Surveillance Working Group Prevalences, genotypes, and risk factors for HIV transmission in South America J Acquir Immune Defic Syndr 2005, 40:57-64 10.1097/01.qai.0000159667.72584.8b 16123683
18. Sanabani S Neto WK de Sa Filho DJ Diaz RS Munerato P Janini LM Sabino EC Full-length genome analysis of human immunodeficiency virus type 1 subtype C in Brazil AIDS Res Hum Retroviruses 2006, 22:171-176 10.1089/ aid.2006.22.171 16478399
19. Steain MC Wang B Dwyer DE Saksena NK HIV-1 co-infection, superinfection and recombination Sex Health 2004, 1:239-50 10.1071/SH04024 16335754
20. Fang G Weiser B Kuiken C Philpott SM Rowland-Jones S Plummer F Kimani J Shi B Kaul R Bwayo J Anzala O Burger H Recombination following superinfection by HIV-1 AIDS 2004, 18:153-159 10.1097/ 00002030-200401230-00003 15075531
21. Petroni A Deluchi G Pryluka D Rotryng F Bortolozzi R Lopardo G Bouzas MB Zapiola I Garone D Rodriguez C Chiocconi E Lazaro ME Murano F Maranzana A Oliva SM Aparicio M Beltran M Benetucci JA Update on primary HIV-1 resistance in Argentina: Emergence of mutations conferring high-level resistance to nonnucleoside reverse transcriptase inhibitors in drug-naive patients J Acquir Immune Defic Syndr 2006, 42:506-510 10.1097/ 01.qai.0000222285.44460.e2 16773027
22. Kijak GH Pampuro SE Avila MM Zala C Cahn P Wainberg MA Salomon H Resistance profiles to antiretroviral drugs in HIV-1 drug-naive patients in Argentina Antivir Ther 2001, 6:71-77 11417764
23. World Health Organization. Guidelines for Surveillance of HIV drug resistance, 2003 http://www.phppo.cdc.gov/dls/ila/cd/who-afro/ resisguide12_12.pdf
24. Gottlieb GS Nickle DC Jensen MA Wong KG Grobler J Li F Liu SL Rademeyer C Learn GH Karim SS Williamson C Corey L Margolick JB Mullins JI Dual HIV-1 infection associated with rapid disease progression Lancet 2004, 363:619-622 10.1016/S0140-6736(04)15596-7 14987889