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Volumn 207, Issue 2-4, 2007, Pages 304-318

Random forests as a tool for ecohydrological distribution modelling

Author keywords

Classification tree; Ecohydrology; Generalized linear model; Logistic regression; Random forest; Vegetation model

Indexed keywords

BIODIVERSITY; CELLS; ECOLOGY; HYDROLOGY; MATHEMATICAL MODELS; VEGETATION;

EID: 34548444205     PISSN: 03043800     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.ecolmodel.2007.05.011     Document Type: Article
Times cited : (312)

References (70)
  • 1
    • 0016355478 scopus 로고
    • A new look at statistical-model identification
    • Akaike H. A new look at statistical-model identification. IEEE Trans. Autom. Contr. 19 6 (1974) 716-723
    • (1974) IEEE Trans. Autom. Contr. , vol.19 , Issue.6 , pp. 716-723
    • Akaike, H.1
  • 2
    • 0034779637 scopus 로고    scopus 로고
    • Exploring spatial vegetation dynamics using logistic regression and a multinomial logit model
    • Augustin N.H., Cummins R.P., and French D.D. Exploring spatial vegetation dynamics using logistic regression and a multinomial logit model. J. Appl. Ecol. 38 (2001) 991-1006
    • (2001) J. Appl. Ecol. , vol.38 , pp. 991-1006
    • Augustin, N.H.1    Cummins, R.P.2    French, D.D.3
  • 3
    • 0037202447 scopus 로고    scopus 로고
    • Spatial prediction of species distribution: an interface between ecological theory and statistical modelling
    • Austin M.P. Spatial prediction of species distribution: an interface between ecological theory and statistical modelling. Ecol. Model. 157 2/3 (2002) 101-118
    • (2002) Ecol. Model. , vol.157 , Issue.2-3 , pp. 101-118
    • Austin, M.P.1
  • 4
    • 0003043818 scopus 로고    scopus 로고
    • Determining alternative models for vegetation response analysis: a non-parametric approach
    • Bio A.M.F., Alkemade R., and Barendregt A. Determining alternative models for vegetation response analysis: a non-parametric approach. J. Veget. Sci. 9 (1998) 5-16
    • (1998) J. Veget. Sci. , vol.9 , pp. 5-16
    • Bio, A.M.F.1    Alkemade, R.2    Barendregt, A.3
  • 5
    • 0036937201 scopus 로고    scopus 로고
    • Prediction of plant species distribution in lowland river valleys in Belgium: modelling species response to site conditions
    • Bio A.M.F., De Becker P., De Bie E., Huybrechts W., and Wassen M. Prediction of plant species distribution in lowland river valleys in Belgium: modelling species response to site conditions. Biodivers. Conserv. 11 (2002) 2189-2216
    • (2002) Biodivers. Conserv. , vol.11 , pp. 2189-2216
    • Bio, A.M.F.1    De Becker, P.2    De Bie, E.3    Huybrechts, W.4    Wassen, M.5
  • 8
    • 0035478854 scopus 로고    scopus 로고
    • Random forests
    • Breiman L. Random forests. Mach. Learn. 45 (2001) 5-32
    • (2001) Mach. Learn. , vol.45 , pp. 5-32
    • Breiman, L.1
  • 9
    • 85029465227 scopus 로고    scopus 로고
    • Breiman, L., Cutler, A., 2004a. http://www.stat.berkeley.edu/users/Breiman/RandomForests/cc_papers.html.
  • 10
    • 85029464937 scopus 로고    scopus 로고
    • Breiman, L., Cutler, A., 2004b. http://www.stat.berkeley.edu/users/Breiman/RandomForests/cc_software.html.
  • 12
    • 28944450149 scopus 로고    scopus 로고
    • Prediction of protein-protein interactions using random decision forest framework
    • Chen X.W., and Liu M. Prediction of protein-protein interactions using random decision forest framework. Bioinformatics 21 24 (2006) 4394-4400
    • (2006) Bioinformatics , vol.21 , Issue.24 , pp. 4394-4400
    • Chen, X.W.1    Liu, M.2
  • 13
    • 84973587732 scopus 로고
    • A coefficient of agreement for nominal scales
    • Cohen J. A coefficient of agreement for nominal scales. Educ. Psychol. Meas. 20 (1960) 37-46
    • (1960) Educ. Psychol. Meas. , vol.20 , pp. 37-46
    • Cohen, J.1
  • 14
    • 0033395206 scopus 로고    scopus 로고
    • Ecohydrological characterization of a groundwater-fed alluvial floodplane mire
    • De Becker P., Hermy M., and Butaye J. Ecohydrological characterization of a groundwater-fed alluvial floodplane mire. Appl. Veget. Sci. 2 (1999) 215-228
    • (1999) Appl. Veget. Sci. , vol.2 , pp. 215-228
    • De Becker, P.1    Hermy, M.2    Butaye, J.3
  • 17
    • 0002446375 scopus 로고
    • Historical influence of man on riperian dynamics of a fluvial landscape
    • Décamps H., Fortuné M., Gazelle F., and Patou G. Historical influence of man on riperian dynamics of a fluvial landscape. Landsc. Ecol. 1 (1988) 163-173
    • (1988) Landsc. Ecol. , vol.1 , pp. 163-173
    • Décamps, H.1    Fortuné, M.2    Gazelle, F.3    Patou, G.4
  • 18
    • 30644464444 scopus 로고    scopus 로고
    • Gene selection and classification of microarray data using random forest
    • Diaz-Uriate R., and de Andres S.A. Gene selection and classification of microarray data using random forest. BMC Bioinformatics 7 (2006) 3
    • (2006) BMC Bioinformatics , vol.7 , pp. 3
    • Diaz-Uriate, R.1    de Andres, S.A.2
  • 19
    • 0000259511 scopus 로고    scopus 로고
    • Approximate statistical tests for comparing supervised classification learning algorithms
    • Dietterich T.G. Approximate statistical tests for comparing supervised classification learning algorithms. Neural Comput. 10 (1998) 1895-1923
    • (1998) Neural Comput. , vol.10 , pp. 1895-1923
    • Dietterich, T.G.1
  • 20
    • 33750012330 scopus 로고    scopus 로고
    • Effects of sample survey design on the accuracy of classification tree models in species distribution models
    • Edwards T.C., Cutler D.R., Zimmermann N.E., Geiser L., and Moisen Jr. G.G. Effects of sample survey design on the accuracy of classification tree models in species distribution models. Ecol. Model. 199 (2006) 132-141
    • (2006) Ecol. Model. , vol.199 , pp. 132-141
    • Edwards, T.C.1    Cutler, D.R.2    Zimmermann, N.E.3    Geiser, L.4    Moisen Jr., G.G.5
  • 21
    • 1942456846 scopus 로고    scopus 로고
    • An improved approach for predicting the distribution of rare and endangered species from occurrence and pseudo-absence data
    • Engler R., Guisan A., and Rechsteiner L. An improved approach for predicting the distribution of rare and endangered species from occurrence and pseudo-absence data. J. Appl. Ecol. 41 (2004) 263-274
    • (2004) J. Appl. Ecol. , vol.41 , pp. 263-274
    • Engler, R.1    Guisan, A.2    Rechsteiner, L.3
  • 23
    • 0032507996 scopus 로고    scopus 로고
    • Comparison of the performance of species response models in several landscape units in the province of North-Holland, The Netherlands
    • Ertsen A.C.D., Bio A.M.F., Bleuten W., and Wassen M.J. Comparison of the performance of species response models in several landscape units in the province of North-Holland, The Netherlands. Ecol. Model. 109 2 (1998) 213-223
    • (1998) Ecol. Model. , vol.109 , Issue.2 , pp. 213-223
    • Ertsen, A.C.D.1    Bio, A.M.F.2    Bleuten, W.3    Wassen, M.J.4
  • 25
    • 0030953391 scopus 로고    scopus 로고
    • A review of methods for the assessment of prediction errors in conservation presence/absence models
    • Fielding A.H., and Bell J.F. A review of methods for the assessment of prediction errors in conservation presence/absence models. Environ. Conserv. 24 1 (1997) 38-49
    • (1997) Environ. Conserv. , vol.24 , Issue.1 , pp. 38-49
    • Fielding, A.H.1    Bell, J.F.2
  • 26
    • 0002927729 scopus 로고
    • Simulating the distribution of plant communities in an alpine landscape
    • Fischer H.S. Simulating the distribution of plant communities in an alpine landscape. Coenoses 5 (1990) 37-49
    • (1990) Coenoses , vol.5 , pp. 37-49
    • Fischer, H.S.1
  • 27
    • 34247144660 scopus 로고
    • The application of neural networks to the floristic classification of remote sensing and gis data in complex terrain
    • American Society of Photogrammetry and Remote Sensing, Bethesda, MD
    • Fitzgerald R.W. The application of neural networks to the floristic classification of remote sensing and gis data in complex terrain. Proceedings of the XVII Congress ASPRS. American Society of Photogrammetry and Remote Sensing, Bethesda, MD (1992) 570-573
    • (1992) Proceedings of the XVII Congress ASPRS , pp. 570-573
    • Fitzgerald, R.W.1
  • 28
    • 0032467477 scopus 로고    scopus 로고
    • Predicting the distribution of shrub in southern California from climate and terrain-derived variables
    • Franklin J. Predicting the distribution of shrub in southern California from climate and terrain-derived variables. J. Veget. Sci. 9 (2000) 733-748
    • (2000) J. Veget. Sci. , vol.9 , pp. 733-748
    • Franklin, J.1
  • 30
    • 0003093514 scopus 로고
    • The role of hydrology in freshwater wetland ecosystems
    • Good R.E., Whingham D.F., and Simpson R.L. (Eds), Academic Press
    • Gosselink J.G., and Turner R.E. The role of hydrology in freshwater wetland ecosystems. In: Good R.E., Whingham D.F., and Simpson R.L. (Eds). Freshwater Wetlands: Ecological Processes and Management Potential (1978), Academic Press 63-78
    • (1978) Freshwater Wetlands: Ecological Processes and Management Potential , pp. 63-78
    • Gosselink, J.G.1    Turner, R.E.2
  • 31
    • 24344493920 scopus 로고    scopus 로고
    • Predicting species distribution: offering more than simple habitat models
    • Guisan A., and Thuiller W. Predicting species distribution: offering more than simple habitat models. Ecol. Lett. 8 (2005) 993-1009
    • (2005) Ecol. Lett. , vol.8 , pp. 993-1009
    • Guisan, A.1    Thuiller, W.2
  • 32
    • 0034610199 scopus 로고    scopus 로고
    • Predictive habitat distribution models in ecology
    • Guisan A., and Zimmerman N.E. Predictive habitat distribution models in ecology. Ecol. Model. 135 2/3 (2000) 147-186
    • (2000) Ecol. Model. , vol.135 , Issue.2-3 , pp. 147-186
    • Guisan, A.1    Zimmerman, N.E.2
  • 33
    • 14644421528 scopus 로고    scopus 로고
    • Investigation of the random forest framework for classification of hyperspectral data
    • Ham J., Chen Y.C., Crawford M.P., and Ghosh J. Investigation of the random forest framework for classification of hyperspectral data. IEEE Trans. Geosci. Remote Sens. 43 3 (2005) 492-501
    • (2005) IEEE Trans. Geosci. Remote Sens. , vol.43 , Issue.3 , pp. 492-501
    • Ham, J.1    Chen, Y.C.2    Crawford, M.P.3    Ghosh, J.4
  • 34
    • 27844472191 scopus 로고    scopus 로고
    • An empirical comparison of ensemble methods based on classification trees
    • Hamza M., and Larocque D. An empirical comparison of ensemble methods based on classification trees. J. Statist. Comput. Simulat. 75 8 (2005) 629-643
    • (2005) J. Statist. Comput. Simulat. , vol.75 , Issue.8 , pp. 629-643
    • Hamza, M.1    Larocque, D.2
  • 38
    • 0000678373 scopus 로고
    • Reciprocal averaging-eigenvector method of ordination
    • Hill M.O. Reciprocal averaging-eigenvector method of ordination. J. Ecol. 61 (1973) 237-244
    • (1973) J. Ecol. , vol.61 , pp. 237-244
    • Hill, M.O.1
  • 45
    • 0001290841 scopus 로고    scopus 로고
    • Glossary and terms
    • Kohavi R., and Provost F. Glossary and terms. Mach. Learn. 30 (1998) 271-274
    • (1998) Mach. Learn. , vol.30 , pp. 271-274
    • Kohavi, R.1    Provost, F.2
  • 46
    • 0345040873 scopus 로고    scopus 로고
    • Classification and regression by random forest
    • Liaw A., and Wiener M. Classification and regression by random forest. R News 2/3 (2002) 18-22
    • (2002) R News , vol.2-3 , pp. 18-22
    • Liaw, A.1    Wiener, M.2
  • 47
    • 20444488428 scopus 로고    scopus 로고
    • Selecting thresholds of occurrence in the prediction of species distributions
    • Liu C.R., Berrey P.M., Dawson T.P., and Pearson R.G. Selecting thresholds of occurrence in the prediction of species distributions. Ecography 28 3 (2005) 385-393
    • (2005) Ecography , vol.28 , Issue.3 , pp. 385-393
    • Liu, C.R.1    Berrey, P.M.2    Dawson, T.P.3    Pearson, R.G.4
  • 48
    • 0003087727 scopus 로고
    • Decimal scale for releves of permanent quadrats
    • Londo G. Decimal scale for releves of permanent quadrats. Vegetatio 33 (1976) 61-64
    • (1976) Vegetatio , vol.33 , pp. 61-64
    • Londo, G.1
  • 49
    • 0034126611 scopus 로고    scopus 로고
    • Regression and model-building in conservation biology, biogeography, and ecology: the distinction between - and reconciliation of - 'predictive' and 'explanatory' models
    • Mac Nally R. Regression and model-building in conservation biology, biogeography, and ecology: the distinction between - and reconciliation of - 'predictive' and 'explanatory' models. Biodivers. Conserv. 9 (2000) 655-671
    • (2000) Biodivers. Conserv. , vol.9 , pp. 655-671
    • Mac Nally, R.1
  • 52
    • 0033825946 scopus 로고    scopus 로고
    • The value of wetlands: importance of scale and landscape setting
    • Mitsch W.J., and Gosselink J.G. The value of wetlands: importance of scale and landscape setting. Ecol. Econ. 35 (2000) 25-33
    • (2000) Ecol. Econ. , vol.35 , pp. 25-33
    • Mitsch, W.J.1    Gosselink, J.G.2
  • 54
    • 13344278660 scopus 로고    scopus 로고
    • Random forest classifier for remote sensing classification
    • Pal M. Random forest classifier for remote sensing classification. Int. J. Remote Sens. 26 1 (2005) 217-222
    • (2005) Int. J. Remote Sens. , vol.26 , Issue.1 , pp. 217-222
    • Pal, M.1
  • 55
    • 27944446350 scopus 로고    scopus 로고
    • Maximum entropy modeling of species geographic distributions
    • Phillips S.J., Anderson R.P., and Schapire R.E. Maximum entropy modeling of species geographic distributions. Ecol. Model. 190 3/4 (2006) 231-259
    • (2006) Ecol. Model. , vol.190 , Issue.3-4 , pp. 231-259
    • Phillips, S.J.1    Anderson, R.P.2    Schapire, R.E.3
  • 56
    • 0343724635 scopus 로고    scopus 로고
    • Land-use change model validation by a ROC method for the Ipswich watershed, Massachusetts, USA
    • Pontius R.G., and Schneider Jr. L. Land-use change model validation by a ROC method for the Ipswich watershed, Massachusetts, USA. Agric. Ecosyst. Environ. 85 1-3 (2001) 239-248
    • (2001) Agric. Ecosyst. Environ. , vol.85 , Issue.1-3 , pp. 239-248
    • Pontius, R.G.1    Schneider Jr., L.2
  • 57
    • 0035676249 scopus 로고    scopus 로고
    • Applications of machine learning to ecological modelling
    • Recknagel F. Applications of machine learning to ecological modelling. Ecol. Model. 146 (2001) 303-310
    • (2001) Ecol. Model. , vol.146 , pp. 303-310
    • Recknagel, F.1
  • 58
    • 0033986531 scopus 로고    scopus 로고
    • Ecohydrology: a hydrologic perspective of climate-soil-vegetation dynamics
    • Rodriguez-Iturbe I. Ecohydrology: a hydrologic perspective of climate-soil-vegetation dynamics. Water Resour. Res. 36 (2000) 3-9
    • (2000) Water Resour. Res. , vol.36 , pp. 3-9
    • Rodriguez-Iturbe, I.1
  • 59
    • 0029773718 scopus 로고    scopus 로고
    • Impact of hydrological changes on nature conservation areas in the Netherlands
    • Runhaar J., Vangool C.R., and Groen C.L.G. Impact of hydrological changes on nature conservation areas in the Netherlands. Biol. Conserv. 76 (1996) 269-276
    • (1996) Biol. Conserv. , vol.76 , pp. 269-276
    • Runhaar, J.1    Vangool, C.R.2    Groen, C.L.G.3
  • 60
    • 1942456858 scopus 로고    scopus 로고
    • New paradigms for modeling species distributions
    • Rushton S.P., Ormerod S.J., and Kerby G. New paradigms for modeling species distributions. J. Appl. Ecol. 41 (2004) 193-200
    • (2004) J. Appl. Ecol. , vol.41 , pp. 193-200
    • Rushton, S.P.1    Ormerod, S.J.2    Kerby, G.3
  • 61
    • 0026614253 scopus 로고
    • Regional changes in groundwater-flow patterns and effects on groundwater composition
    • Schot P.P., and Molenaar A. Regional changes in groundwater-flow patterns and effects on groundwater composition. J. Hydrol. 130 (1992) 151-170
    • (1992) J. Hydrol. , vol.130 , pp. 151-170
    • Schot, P.P.1    Molenaar, A.2
  • 62
    • 4644223644 scopus 로고    scopus 로고
    • An evaluation of methods for modeling species distributions
    • Segurado P., and Araujo M.B. An evaluation of methods for modeling species distributions. J. Biogeogr. 31 (2004) 1555-1568
    • (2004) J. Biogeogr. , vol.31 , pp. 1555-1568
    • Segurado, P.1    Araujo, M.B.2
  • 63
    • 32644456104 scopus 로고    scopus 로고
    • Modelling establishment probabilities of an exotic plant, Rhododendron ponticum, invading a heterogeneous, woodland landscape using logistic regression with spatial autocorrelation
    • Stephenson C.M., MacKenzie M., Edwards C., and Travis J. Modelling establishment probabilities of an exotic plant, Rhododendron ponticum, invading a heterogeneous, woodland landscape using logistic regression with spatial autocorrelation. Ecol. Model. 193 (2006) 747-758
    • (2006) Ecol. Model. , vol.193 , pp. 747-758
    • Stephenson, C.M.1    MacKenzie, M.2    Edwards, C.3    Travis, J.4
  • 65
    • 28244501239 scopus 로고    scopus 로고
    • The continuing challenges of testing species distribution models
    • Vaughan I.P., and Ormerod S.J. The continuing challenges of testing species distribution models. J. Appl. Ecol. 42 (2005) 720-730
    • (2005) J. Appl. Ecol. , vol.42 , pp. 720-730
    • Vaughan, I.P.1    Ormerod, S.J.2
  • 66
    • 0030811685 scopus 로고    scopus 로고
    • A comparison of six models predicting vegetation response to hydrological habitat change
    • Venterink H.O., and Wassen M.J. A comparison of six models predicting vegetation response to hydrological habitat change. Ecol. Model. 101 2/3 (1997) 347-361
    • (1997) Ecol. Model. , vol.101 , Issue.2-3 , pp. 347-361
    • Venterink, H.O.1    Wassen, M.J.2
  • 67
    • 84986797858 scopus 로고
    • Topographic position and water chemistry of fens in a Dutch riverplain
    • Wassen M.J., and Barendregt A. Topographic position and water chemistry of fens in a Dutch riverplain. J. Veget. Sci. 3 (1992) 447-456
    • (1992) J. Veget. Sci. , vol.3 , pp. 447-456
    • Wassen, M.J.1    Barendregt, A.2
  • 69
    • 0001884644 scopus 로고
    • Individual comparisons by ranking methods
    • Wilcoxon F. Individual comparisons by ranking methods. Biometrics 1 (1945) 80-83
    • (1945) Biometrics , vol.1 , pp. 80-83
    • Wilcoxon, F.1
  • 70
    • 84986799949 scopus 로고
    • Generalized additive-models in plant ecology
    • Yee T.W., and Mitchell N.D. Generalized additive-models in plant ecology. J. Veget. Sci. 2 (1991) 587-602
    • (1991) J. Veget. Sci. , vol.2 , pp. 587-602
    • Yee, T.W.1    Mitchell, N.D.2


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