-
1
-
-
0030801002
-
Gapped BLAST and PSI-BLAST: A new generation of protein database search programs
-
Altschul SF, Madden TL, Schaffer AA, Zhang J, et al. (1997). Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. Nucleic Acids Res. 25: 3389-3402.
-
(1997)
Nucleic Acids Res
, vol.25
, pp. 3389-3402
-
-
Altschul, S.F.1
Madden, T.L.2
Schaffer, A.A.3
Zhang, J.4
-
2
-
-
15044350866
-
Adhesion properties, fimbrial expression and PCR detection of adhesin-related genes of avian Escherichia coli strains
-
Amabile de Campos T, Stehling EG, Ferreira A, Pestana de Castro AF, et al. (2005). Adhesion properties, fimbrial expression and PCR detection of adhesin-related genes of avian Escherichia coli strains. Vet. Microbiol. 106: 275-285.
-
(2005)
Vet. Microbiol
, vol.106
, pp. 275-285
-
-
Amabile de Campos, T.1
Stehling, E.G.2
Ferreira, A.3
Pestana de Castro, A.F.4
-
3
-
-
0003644056
-
-
Cold Spring Harbor Laboratory Press, New York
-
Birren B, Green ED, Klapholz S, Myers RM, et al. (1997). Genome analysis: a laboratory manual. Cold Spring Harbor Laboratory Press, New York.
-
(1997)
Genome analysis: A laboratory manual
-
-
Birren, B.1
Green, E.D.2
Klapholz, S.3
Myers, R.M.4
-
4
-
-
15444350252
-
The complete genome sequence of Escherichia coli K-12
-
Blattner FR, Plunkett G III, Bloch CA, Perna NT, et al. (1997). The complete genome sequence of Escherichia coli K-12. Science 277: 1453-1474.
-
(1997)
Science
, vol.277
, pp. 1453-1474
-
-
Blattner, F.R.1
Plunkett III, G.2
Bloch, C.A.3
Perna, N.T.4
-
5
-
-
0033636701
-
The virulence plasmid pWR100 and the repertoire of proteins secreted by the type III secretion apparatus of Shigella flexneri
-
Buchrieser C, Glaser P, Rusniok C, Nedjari H, et al. (2000). The virulence plasmid pWR100 and the repertoire of proteins secreted by the type III secretion apparatus of Shigella flexneri. Mol. Microbiol. 38: 760-771.
-
(2000)
Mol. Microbiol
, vol.38
, pp. 760-771
-
-
Buchrieser, C.1
Glaser, P.2
Rusniok, C.3
Nedjari, H.4
-
6
-
-
0029073731
-
Analysis of the Escherichia coli genome VI: DNA sequence of the region from 92.8 through 100 minutes
-
Burland V, Plunkett G III, Sofia HJ, Daniels DL, et al. (1995). Analysis of the Escherichia coli genome VI: DNA sequence of the region from 92.8 through 100 minutes. Nucleic Acids Res. 23: 2105-2119.
-
(1995)
Nucleic Acids Res
, vol.23
, pp. 2105-2119
-
-
Burland, V.1
Plunkett III, G.2
Sofia, H.J.3
Daniels, D.L.4
-
7
-
-
0033088883
-
Avian pathogenic Escherichia coli (APEC)
-
Dho-Moulin M and Fairbrother JM (1999). Avian pathogenic Escherichia coli (APEC). Vet. Res. 30: 299-316.
-
(1999)
Vet. Res
, vol.30
, pp. 299-316
-
-
Dho-Moulin, M.1
Fairbrother, J.M.2
-
8
-
-
0026482190
-
A plasmid encoded type IV fimbrial gene of enteropathogenic Escherichia coli associated with localized adherence
-
Donnenberg MS, Girón JA, Nataro JP and Kaper JP (1992). A plasmid encoded type IV fimbrial gene of enteropathogenic Escherichia coli associated with localized adherence. Mol. Microbiol. 6: 3427-3437.
-
(1992)
Mol. Microbiol
, vol.6
, pp. 3427-3437
-
-
Donnenberg, M.S.1
Girón, J.A.2
Nataro, J.P.3
Kaper, J.P.4
-
9
-
-
0033932231
-
Relationship between the Tsh autotransporter and pathogenicity of avian Escherichia coli and localization and analysis of the Tsh genetic region
-
Dozois CM, Dho-Moulin M, Bree A, Fairbrother JM, et al. (2000). Relationship between the Tsh autotransporter and pathogenicity of avian Escherichia coli and localization and analysis of the Tsh genetic region. Infect. Immun. 68: 4145-4154.
-
(2000)
Infect. Immun
, vol.68
, pp. 4145-4154
-
-
Dozois, C.M.1
Dho-Moulin, M.2
Bree, A.3
Fairbrother, J.M.4
-
10
-
-
0037422561
-
Identification of pathogen-specific and conserved genes expressed in vivo by an avian pathogenic Escherichia coli strain
-
Dozois CM, Daigle F and Curtiss R III (2003). Identification of pathogen-specific and conserved genes expressed in vivo by an avian pathogenic Escherichia coli strain. Proc. Natl. Acad. Sci. USA 100: 247-252.
-
(2003)
Proc. Natl. Acad. Sci. USA
, vol.100
, pp. 247-252
-
-
Dozois, C.M.1
Daigle, F.2
Curtiss III, R.3
-
12
-
-
0036837780
-
Escherichia coli insertion sequence IS150150: Transposition via circular and linear intermediates
-
Haas M and Rak B (2002). Escherichia coli insertion sequence IS150150: transposition via circular and linear intermediates. J. Bacteriol. 184: 5833-5841.
-
(2002)
J. Bacteriol
, vol.184
, pp. 5833-5841
-
-
Haas, M.1
Rak, B.2
-
14
-
-
0035078468
-
Complete DNA sequence and comparative analysis of the 50-kilobase virulence plasmid of Salmonella enterica Serovar Choleraesuis
-
Haneda T, Okada N, Nakazawa N, Kawakami T, et al. (2001). Complete DNA sequence and comparative analysis of the 50-kilobase virulence plasmid of Salmonella enterica Serovar Choleraesuis. Infect. Immun. 69: 2612-2620.
-
(2001)
Infect. Immun
, vol.69
, pp. 2612-2620
-
-
Haneda, T.1
Okada, N.2
Nakazawa, N.3
Kawakami, T.4
-
15
-
-
14744279815
-
Global expression of prophage genes in Escherichia coli O157:H7 strain EDL933 in response to norfloxacin
-
Herold S, Siebert J, Huber A and Schmidt H (2005). Global expression of prophage genes in Escherichia coli O157:H7 strain EDL933 in response to norfloxacin. Antimicrob. Agents Chemother. 49: 931-944.
-
(2005)
Antimicrob. Agents Chemother
, vol.49
, pp. 931-944
-
-
Herold, S.1
Siebert, J.2
Huber, A.3
Schmidt, H.4
-
16
-
-
4644321099
-
Interactions of the RepA helicase hexamer of plasmid RSF1010 with the ssDNA. Quantitative analysis of stoichiometries, intrinsic affinities, cooperativities, and heterogeneity of the total ssDNA-binding site
-
Jezewska MJ, Galletto R and Bujalowski W (2004). Interactions of the RepA helicase hexamer of plasmid RSF1010 with the ssDNA. Quantitative analysis of stoichiometries, intrinsic affinities, cooperativities, and heterogeneity of the total ssDNA-binding site. J. Mol. Biol. 343: 115-136.
-
(2004)
J. Mol. Biol
, vol.343
, pp. 115-136
-
-
Jezewska, M.J.1
Galletto, R.2
Bujalowski, W.3
-
17
-
-
0035992095
-
Location of increased serum survival gene and selected virulence traits on a conjugative R plasmid in an avian Escherichia coli isolate
-
Johnson TJ, Giddings CW, Horne SM, Gibbs PS, et al. (2002). Location of increased serum survival gene and selected virulence traits on a conjugative R plasmid in an avian Escherichia coli isolate. Avian Dis. 46: 342-352.
-
(2002)
Avian Dis
, vol.46
, pp. 342-352
-
-
Johnson, T.J.1
Giddings, C.W.2
Horne, S.M.3
Gibbs, P.S.4
-
18
-
-
0023885533
-
Evidence of correlation between 50-kilobase plasmid of Salmonella choleraesuis and its virulence
-
Kawahara K, Haraguchi Y, Tsuchimoto M, Terakado N, et al. (1988). Evidence of correlation between 50-kilobase plasmid of Salmonella choleraesuis and its virulence. Microb. Pathog. 4: 155-163.
-
(1988)
Microb. Pathog
, vol.4
, pp. 155-163
-
-
Kawahara, K.1
Haraguchi, Y.2
Tsuchimoto, M.3
Terakado, N.4
-
19
-
-
0036700152
-
Virulence factors of Escherichia coli serotypes associated with avian colisepticaemia
-
La Ragione RM and Woodward MJ (2002). Virulence factors of Escherichia coli serotypes associated with avian colisepticaemia. Res. Vet. Sci. 73: 27-35.
-
(2002)
Res. Vet. Sci
, vol.73
, pp. 27-35
-
-
La Ragione, R.M.1
Woodward, M.J.2
-
20
-
-
0034026469
-
The role of fimbriae and flagella in the adherence of avian strains of Escherichia coli O78:K80 to tissue culture cells and tracheal and gut explants
-
La Ragione RM, Cooley WA and Woodward MJ (2000a). The role of fimbriae and flagella in the adherence of avian strains of Escherichia coli O78:K80 to tissue culture cells and tracheal and gut explants. J. Med. Microbiol. 49: 327-338.
-
(2000)
J. Med. Microbiol
, vol.49
, pp. 327-338
-
-
La Ragione, R.M.1
Cooley, W.A.2
Woodward, M.J.3
-
21
-
-
0033887239
-
The role of fimbriae and flagella in the colonization, invasion and persistence of Escherichia coli O78:K80 in the day-old-chick model
-
La Ragione RM, Sayers AR and Woodward MJ (2000b). The role of fimbriae and flagella in the colonization, invasion and persistence of Escherichia coli O78:K80 in the day-old-chick model. Epidemiol. Infect. 124: 351-363.
-
(2000)
Epidemiol. Infect
, vol.124
, pp. 351-363
-
-
La Ragione, R.M.1
Sayers, A.R.2
Woodward, M.J.3
-
22
-
-
0023067036
-
Presence and expression of aerobactin genes in virulent avian strains of Escherichia coli
-
Lafont JP, Dho M, D'Hauteville HM, Bree A, et al. (1987). Presence and expression of aerobactin genes in virulent avian strains of Escherichia coli. Infect. Immun. 55: 193-197.
-
(1987)
Infect. Immun
, vol.55
, pp. 193-197
-
-
Lafont, J.P.1
Dho, M.2
D'Hauteville, H.M.3
Bree, A.4
-
23
-
-
0017980782
-
A multiple plasmid-containing Escherichia coli strain: Convenient source of size reference plasmid molecules
-
Macrina FL, Kopecko DJ, Jones KR, Ayers DJ, et al. (1978). A multiple plasmid-containing Escherichia coli strain: convenient source of size reference plasmid molecules. Plasmid 1: 417-420.
-
(1978)
Plasmid
, vol.1
, pp. 417-420
-
-
Macrina, F.L.1
Kopecko, D.J.2
Jones, K.R.3
Ayers, D.J.4
-
24
-
-
0033043898
-
Nucleotide sequence of the F plasmid leading region
-
Manwaring NP, Skurray RA and Firth N (1999). Nucleotide sequence of the F plasmid leading region. Plasmid 41: 219-225.
-
(1999)
Plasmid
, vol.41
, pp. 219-225
-
-
Manwaring, N.P.1
Skurray, R.A.2
Firth, N.3
-
25
-
-
11844282205
-
Extensive gene diversity in septicemic Escherichia coli strains
-
Mokady D, Gophna U and Ron EZ (2005). Extensive gene diversity in septicemic Escherichia coli strains. J. Clin. Microbiol. 43: 66-73.
-
(2005)
J. Clin. Microbiol
, vol.43
, pp. 66-73
-
-
Mokady, D.1
Gophna, U.2
Ron, E.Z.3
-
27
-
-
0035945586
-
Genome sequence of enterohaemorrhagic Escherichia coli O157:H7
-
Perna NT, Plunkett G III, Burland V, Mau B, et al. (2001). Genome sequence of enterohaemorrhagic Escherichia coli O157:H7. Nature 409: 529-533.
-
(2001)
Nature
, vol.409
, pp. 529-533
-
-
Perna, N.T.1
Plunkett III, G.2
Burland, V.3
Mau, B.4
-
28
-
-
0028348785
-
Isolation and characterization of a gene involved in hemagglutination by an avian pathogenic Escherichia coli strain
-
Provence DL and Curtiss R III (1994). Isolation and characterization of a gene involved in hemagglutination by an avian pathogenic Escherichia coli strain. Infect. Immun. 62: 1369-1380.
-
(1994)
Infect. Immun
, vol.62
, pp. 1369-1380
-
-
Provence, D.L.1
Curtiss III, R.2
-
29
-
-
14844360359
-
Characterizing the APEC pathotype
-
Rodriguez-Siek KE, Giddings CW, Doetkott C, Johnson TJ, et al. (2005). Characterizing the APEC pathotype. Vet. Res. 36: 241-256.
-
(2005)
Vet. Res
, vol.36
, pp. 241-256
-
-
Rodriguez-Siek, K.E.1
Giddings, C.W.2
Doetkott, C.3
Johnson, T.J.4
-
32
-
-
4844226727
-
Genomic subtraction for the identification of putative new virulence factors of an avian pathogenic Escherichia coli strain of O2 serogroup
-
Schouler C, Koffmann F, Amory C, Leroy-Setrin S, et al. (2004). Genomic subtraction for the identification of putative new virulence factors of an avian pathogenic Escherichia coli strain of O2 serogroup. Microbiology 150: 2973-2984.
-
(2004)
Microbiology
, vol.150
, pp. 2973-2984
-
-
Schouler, C.1
Koffmann, F.2
Amory, C.3
Leroy-Setrin, S.4
-
33
-
-
34548280960
-
Adhesion and invasion characteristics of a septicaemic avian Escherichia coli strain are plasmid mediated
-
Stehling EG, Campos TA, Ferreira A and Silveira WD (2003a). Adhesion and invasion characteristics of a septicaemic avian Escherichia coli strain are plasmid mediated. J. Appl. Res. Vet. Med. 1: 27-36.
-
(2003)
J. Appl. Res. Vet. Med
, vol.1
, pp. 27-36
-
-
Stehling, E.G.1
Campos, T.A.2
Ferreira, A.3
Silveira, W.D.4
-
34
-
-
0038305197
-
Characterization of a plasmid-encoded adhesin of an avian pathogenic Escherichia coli (APEC) strain isolated from a case of swollen head syndrome (SHS)
-
Stehling EG, Yano T, Brocchi M and da Silveira WD (2003b). Characterization of a plasmid-encoded adhesin of an avian pathogenic Escherichia coli (APEC) strain isolated from a case of swollen head syndrome (SHS). Vet. Microbiol. 95: 111-120.
-
(2003)
Vet. Microbiol
, vol.95
, pp. 111-120
-
-
Stehling, E.G.1
Yano, T.2
Brocchi, M.3
da Silveira, W.D.4
-
35
-
-
7044269369
-
Association of iss and iucA, but not tsh, with plasmid-mediated virulence of avian pathogenic Escherichia coli
-
Tivendale KA, Allen JL, Ginns CA, Crabb BS, et al. (2004). Association of iss and iucA, but not tsh, with plasmid-mediated virulence of avian pathogenic Escherichia coli. Infect. Immun. 72: 6554-6560.
-
(2004)
Infect. Immun
, vol.72
, pp. 6554-6560
-
-
Tivendale, K.A.1
Allen, J.L.2
Ginns, C.A.3
Crabb, B.S.4
-
36
-
-
0032831061
-
Complete DNA sequence and structural analysis of the enteropathogenic Escherichia coli adherence factor plasmid
-
Tobe T, Hayashi T, Han CG, Schoolnik GK, et al. (1999). Complete DNA sequence and structural analysis of the enteropathogenic Escherichia coli adherence factor plasmid. Infect. Immun. 67: 5455-5462.
-
(1999)
Infect. Immun
, vol.67
, pp. 5455-5462
-
-
Tobe, T.1
Hayashi, T.2
Han, C.G.3
Schoolnik, G.K.4
-
37
-
-
14244251962
-
Evolution of genomic content in the stepwise emergence of Escherichia coli O157:H7
-
Wick LM, Qi W, Lacher DW and Whittam TS (2005). Evolution of genomic content in the stepwise emergence of Escherichia coli O157:H7. J. Bacteriol. 187: 1783-1791.
-
(2005)
J. Bacteriol
, vol.187
, pp. 1783-1791
-
-
Wick, L.M.1
Qi, W.2
Lacher, D.W.3
Whittam, T.S.4
|