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Volumn 4, Issue NOV, 2006, Pages 367-373

Housekeeping gene selection for quantitative real-time PCR assays in the seagrass Zosters marina subjected to heat stress

Author keywords

[No Author keywords available]

Indexed keywords

EUKARYOTA; ZOSTERA MARINA;

EID: 34548222731     PISSN: 15415856     EISSN: 15415856     Source Type: Journal    
DOI: 10.4319/lom.2006.4.367     Document Type: Article
Times cited : (61)

References (28)
  • 1
    • 3442876969 scopus 로고    scopus 로고
    • Normalization of real-time quantitative reverse transcription-PCR data: A model-based variance estimation approach to identify genes suited for normalization, applied to bladder and colon cancer data sets
    • Andersen, C. L., J. L. Jensen, and T. F. Orntoft. 2004. Normalization of real-time quantitative reverse transcription-PCR data: a model-based variance estimation approach to identify genes suited for normalization, applied to bladder and colon cancer data sets. Cancer Res. 64:5245-5250.
    • (2004) Cancer Res , vol.64 , pp. 5245-5250
    • Andersen, C.L.1    Jensen, J.L.2    Orntoft, T.F.3
  • 2
    • 5444258598 scopus 로고    scopus 로고
    • Validating internal controls for quantitative plant gene expression studies
    • Brunner, A. M., I. A. Yakovlev, and S. H. Strauss. 2004. Validating internal controls for quantitative plant gene expression studies. BMC Plant Biol. 4:14.
    • (2004) BMC Plant Biol , vol.4 , pp. 14
    • Brunner, A.M.1    Yakovlev, I.A.2    Strauss, S.H.3
  • 3
    • 33644865858 scopus 로고    scopus 로고
    • Coyne, K. J., and others. 2005. Improved quantitative real-time PCR assays for enumeration of harmful algal species in field samples using an exogenous DNA reference standard. Limnol. Oceanogr. Methods 3:381-391.
    • Coyne, K. J., and others. 2005. Improved quantitative real-time PCR assays for enumeration of harmful algal species in field samples using an exogenous DNA reference standard. Limnol. Oceanogr. Methods 3:381-391.
  • 5
    • 0037249915 scopus 로고    scopus 로고
    • Meristematic oxygen variability in eelgrass (Zostera marina)
    • Greve, T. M., J. Borum, and O. Pedersen. 2003. Meristematic oxygen variability in eelgrass (Zostera marina). Limnol. Oceanogr. 48:210-216.
    • (2003) Limnol. Oceanogr , vol.48 , pp. 210-216
    • Greve, T.M.1    Borum, J.2    Pedersen, O.3
  • 6
    • 7444226814 scopus 로고    scopus 로고
    • Equivalence test in quantitative reverse transcription polymerase chain reaction: Confirmation of reference genes suitable for normalization
    • Haller, F., B. Kulle, S. Schwager, B. Gunawan, A. von Heydebreck, H. Sultmann, and L. Fuzesi. 2004. Equivalence test in quantitative reverse transcription polymerase chain reaction: confirmation of reference genes suitable for normalization. Anal. Biochem. 335:1-9.
    • (2004) Anal. Biochem , vol.335 , pp. 1-9
    • Haller, F.1    Kulle, B.2    Schwager, S.3    Gunawan, B.4    von Heydebreck, A.5    Sultmann, H.6    Fuzesi, L.7
  • 7
    • 15444368041 scopus 로고    scopus 로고
    • Isolation and characterization of stress-responsive genes from the scleractinian coral Pociliopora damicornis
    • Hashimoto, K., T. Shibuno, E. Murayama-Kayano, H. Tanaka, and A. T. Kayano. 2004. Isolation and characterization of stress-responsive genes from the scleractinian coral Pociliopora damicornis. Coral Reefs 23:485-491.
    • (2004) Coral Reefs , vol.23 , pp. 485-491
    • Hashimoto, K.1    Shibuno, T.2    Murayama-Kayano, E.3    Tanaka, H.4    Kayano, A.T.5
  • 9
    • 20144382247 scopus 로고    scopus 로고
    • Genomics-fueled approaches to current challenges in marine ecology
    • Hofmann, G. E., J. L. Burnaford, and K. T. Fielman. 2005. Genomics-fueled approaches to current challenges in marine ecology. Trends Ecol. Evol. 20:305-311.
    • (2005) Trends Ecol. Evol , vol.20 , pp. 305-311
    • Hofmann, G.E.1    Burnaford, J.L.2    Fielman, K.T.3
  • 10
    • 21344471138 scopus 로고    scopus 로고
    • Real-time RT-PCR normalisation: Strategies and considerations
    • Huggett, J., K. Dheda, S. Bustin, and A. Zumla. 2005. Real-time RT-PCR normalisation: strategies and considerations. Genes Immun. 6:279-284.
    • (2005) Genes Immun , vol.6 , pp. 279-284
    • Huggett, J.1    Dheda, K.2    Bustin, S.3    Zumla, A.4
  • 11
    • 30344451080 scopus 로고    scopus 로고
    • Expression profiling and validation of reference gene candidates in immune relevant tissues and cells from Atlantic salmon (Salmo salar L.)
    • Ingerslev, H.-C., E. F. Pettersen, R. A. Jakobsen, C. B. Petersen, and H. I. Wergeland. 2006. Expression profiling and validation of reference gene candidates in immune relevant tissues and cells from Atlantic salmon (Salmo salar L.). Mol. Immunol. 43:1194-1201.
    • (2006) Mol. Immunol , vol.43 , pp. 1194-1201
    • Ingerslev, H.-C.1    Pettersen, E.F.2    Jakobsen, R.A.3    Petersen, C.B.4    Wergeland, H.I.5
  • 12
    • 23344442946 scopus 로고    scopus 로고
    • Evaluation of housekeeping genes in placental comparative expression studies
    • Meller, M., S. Vadachkoria, D. A. Luthy, and M. A. Williams. 2005. Evaluation of housekeeping genes in placental comparative expression studies. Placenta 26:601-607.
    • (2005) Placenta , vol.26 , pp. 601-607
    • Meller, M.1    Vadachkoria, S.2    Luthy, D.A.3    Williams, M.A.4
  • 13
    • 16844379879 scopus 로고    scopus 로고
    • Standardization strategy for quantitative PCR in human seminoma and normal testis
    • Neuvians, T. P., and others. 2005. Standardization strategy for quantitative PCR in human seminoma and normal testis. J. Biotechnol. 117:163-171.
    • (2005) J. Biotechnol , vol.117 , pp. 163-171
    • Neuvians, T.P.1    and others2
  • 14
    • 27144456802 scopus 로고    scopus 로고
    • Housekeeping gene selection for real time RT-PCR normalization in potato during biotic and abiotic stress
    • Nicot, N., J.-F. Hausman, L. Hoffmann, and D. Evers. 2005. Housekeeping gene selection for real time RT-PCR normalization in potato during biotic and abiotic stress. J. Exp. Bot. 56:2907-2914.
    • (2005) J. Exp. Bot , vol.56 , pp. 2907-2914
    • Nicot, N.1    Hausman, J.-F.2    Hoffmann, L.3    Evers, D.4
  • 15
    • 28544451081 scopus 로고    scopus 로고
    • Gene expression studies in prostate cancer tissue: Which reference gene should be selected for normalization?
    • Ohl, F., and others. 2005. Gene expression studies in prostate cancer tissue: which reference gene should be selected for normalization? J. Mol. Med. 83:1014-1024.
    • (2005) J. Mol. Med , vol.83 , pp. 1014-1024
    • Ohl, F.1    and others2
  • 16
    • 0036789519 scopus 로고    scopus 로고
    • Variation in gene expression within and among natural populations
    • Oleksiak, M. F., G. A. Churchill, and D. L. Crawford. 2002. Variation in gene expression within and among natural populations. Nat. Genet. 32:261-266.
    • (2002) Nat. Genet , vol.32 , pp. 261-266
    • Oleksiak, M.F.1    Churchill, G.A.2    Crawford, D.L.3
  • 17
    • 17344392308 scopus 로고    scopus 로고
    • A new mathematical model for relative quantification in real-time RT-PCR
    • Pfaffl, M. W., 2001. A new mathematical model for relative quantification in real-time RT-PCR. Nucleic Acids Res. 29: 2002-2007.
    • (2001) Nucleic Acids Res , vol.29 , pp. 2002-2007
    • Pfaffl, M.W.1
  • 18
    • 1842483281 scopus 로고    scopus 로고
    • Determination of stable housekeeping genes, differentially regulated target genes and sample integrity: BestKeeper-Excel-based tool using pair-wise correlations
    • _, A. Tichopad, C. Prgomet, and T. P. Neuvians. 2004. Determination of stable housekeeping genes, differentially regulated target genes and sample integrity: BestKeeper-Excel-based tool using pair-wise correlations. Biotechnol. Lett. 26:509-515.
    • (2004) Biotechnol. Lett , vol.26 , pp. 509-515
    • Pfaffl, M.W.1    Tichopad, A.2    Prgomet, C.3    Neuvians, T.P.4
  • 19
    • 15544374615 scopus 로고    scopus 로고
    • Radonic, A., S. Thulke, H.-G. Bae, M. Müller, W. Siegert, and A. Nitsche. 2005. Reference gene selection for quantitative real-time PCR analysis in virus infected cells: SARS corona virus, yellow fever virus, human herpesvirus-6, camelpox virus and cytomegalovirus infections. Virol. J. 2:7.
    • Radonic, A., S. Thulke, H.-G. Bae, M. Müller, W. Siegert, and A. Nitsche. 2005. Reference gene selection for quantitative real-time PCR analysis in virus infected cells: SARS corona virus, yellow fever virus, human herpesvirus-6, camelpox virus and cytomegalovirus infections. Virol. J. 2:7.
  • 20
    • 0037435395 scopus 로고    scopus 로고
    • Assumption-free analysis of quantitative real-time polymerase chain reaction (PCR) data
    • Ramakers, C., J. M. Ruijter, R. H. L. Deprez, and A. F. M. Moorman. 2003. Assumption-free analysis of quantitative real-time polymerase chain reaction (PCR) data. Neurosci. Lett. 339: 62-66.
    • (2003) Neurosci. Lett , vol.339 , pp. 62-66
    • Ramakers, C.1    Ruijter, J.M.2    Deprez, R.H.L.3    Moorman, A.F.M.4
  • 21
    • 14544286422 scopus 로고    scopus 로고
    • Ecosystem recovery after climatic extremes enhanced by genotypic diversity
    • Reusch, T. B. H., A. Ehlers, A. Hammerli, and B. Worm. 2005. Ecosystem recovery after climatic extremes enhanced by genotypic diversity. Proc. Natl. Acad. Sci. U. S. A. 102: 2826-2831.
    • (2005) Proc. Natl. Acad. Sci. U. S. A , vol.102 , pp. 2826-2831
    • Reusch, T.B.H.1    Ehlers, A.2    Hammerli, A.3    Worm, B.4
  • 22
    • 4043176888 scopus 로고    scopus 로고
    • Coral bleaching: Thermal adaptation in reef coral symbionts
    • Rowan, R. 2004. Coral bleaching: thermal adaptation in reef coral symbionts. Nature 430:742.
    • (2004) Nature , vol.430 , pp. 742
    • Rowan, R.1
  • 23
    • 0038725000 scopus 로고    scopus 로고
    • Acclimation capacity underlies susceptibility to climate change
    • Stillman, J.H. 2003. Acclimation capacity underlies susceptibility to climate change. Science 301:65.
    • (2003) Science , vol.301 , pp. 65
    • Stillman, J.H.1
  • 24
    • 0034807289 scopus 로고    scopus 로고
    • Control genes in quantitative molecular biological techniques: The variability of invariance
    • Stürzenbaum, S. R. and P. Kille. 2001. Control genes in quantitative molecular biological techniques: the variability of invariance. Comp. Biochem. Physiol. B 130:281-289.
    • (2001) Comp. Biochem. Physiol. B , vol.130 , pp. 281-289
    • Stürzenbaum, S.R.1    Kille, P.2
  • 25
  • 26
    • 1542301827 scopus 로고    scopus 로고
    • Accurate normalization of real-time quantitative RT-PCR data by geometric averaging of multiple internal control genes
    • Vandesompele, J., and others. 2002. Accurate normalization of real-time quantitative RT-PCR data by geometric averaging of multiple internal control genes. Genome Biol. 3:1-12.
    • (2002) Genome Biol , vol.3 , pp. 1-12
    • Vandesompele, J.1    and others2
  • 27
    • 0034793639 scopus 로고    scopus 로고
    • Reduced genetic diversity in eelgrass transplantations affects both population growth and individual fitness
    • Williams, S. L. 2001. Reduced genetic diversity in eelgrass transplantations affects both population growth and individual fitness. Ecol. Appl. 11:1472-1488.
    • (2001) Ecol. Appl , vol.11 , pp. 1472-1488
    • Williams, S.L.1
  • 28
    • 0002940927 scopus 로고    scopus 로고
    • Seagrass community ecology
    • M. D. Bertness, S. D. Gaines, and M. E. Hay eds, p
    • _ and J. K. Heck. 2001. Seagrass community ecology. In Marine Community Ecology. M. D. Bertness, S. D. Gaines, and M. E. Hay (eds). p. 371-338.
    • (2001) Marine Community Ecology , pp. 371-338
    • Williams, S.L.1    Heck, J.K.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.