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Volumn 57, Issue 8, 2007, Pages 1747-1751

Amycolatopsis echigonensis sp. nov. and Amycolatopsis niigatensis sp. nov., novel actinomycetes isolated from a filtration substrate

Author keywords

[No Author keywords available]

Indexed keywords

FATTY ACID; GENOMIC DNA; MENAQUINONE; RNA 16S; SODIUM CHLORIDE;

EID: 34548191072     PISSN: 14665026     EISSN: None     Source Type: Journal    
DOI: 10.1099/ijs.0.64791-0     Document Type: Article
Times cited : (17)

References (28)
  • 1
    • 0037008118 scopus 로고    scopus 로고
    • Phylogenetic analysis of the genus Aquaspirillum based on 16S rRNA gene sequences
    • Ding, L. & Yokota, A. (2002). Phylogenetic analysis of the genus Aquaspirillum based on 16S rRNA gene sequences. FEMS Microbiol Lett 212, 165-169.
    • (2002) FEMS Microbiol Lett , vol.212 , pp. 165-169
    • Ding, L.1    Yokota, A.2
  • 2
    • 10044231713 scopus 로고    scopus 로고
    • Ding, L. & Yokota, A. (2004). Proposals of Curvibacter gracilis gen. nov., sp. nov. and Herbaspirillum putei sp. nov. for bacterial strains isolated from well water and reclassification of [Pseudomonas] huttiensis, [Pseudomonas] lanceolata, [Aquaspirillum] delicatum and [Aquaspirillum] autotrophicum as Herbaspirillim huttiense comb. nov., Curvibacter lanceolatus comb. nov., Curvibacter delicatus comb. nov. and Herbaspirillum autotrophicum comb. nov. Int J Syst Evol Microbiol 54, 2223-2230.
    • Ding, L. & Yokota, A. (2004). Proposals of Curvibacter gracilis gen. nov., sp. nov. and Herbaspirillum putei sp. nov. for bacterial strains isolated from well water and reclassification of [Pseudomonas] huttiensis, [Pseudomonas] lanceolata, [Aquaspirillum] delicatum and [Aquaspirillum] autotrophicum as Herbaspirillim huttiense comb. nov., Curvibacter lanceolatus comb. nov., Curvibacter delicatus comb. nov. and Herbaspirillum autotrophicum comb. nov. Int J Syst Evol Microbiol 54, 2223-2230.
  • 3
    • 1842548121 scopus 로고
    • The phylogeny of mycolate-less wall chemotype IV actinomycetes and description of Pseudonocardiaceae fam. nov
    • Embley, T. M., Smida, J. & Stackebrandt, E. (1988). The phylogeny of mycolate-less wall chemotype IV actinomycetes and description of Pseudonocardiaceae fam. nov. Syst Appl Microbiol 11, 44-52.
    • (1988) Syst Appl Microbiol , vol.11 , pp. 44-52
    • Embley, T.M.1    Smida, J.2    Stackebrandt, E.3
  • 4
    • 0024358339 scopus 로고
    • Fluorometric deoxyribonucleic acid-deoxyribonucleic acid hybridization in microdilution wells as an alternative to membrane filter hybridization in which radioisotopes are used to determine genetic relatedness among bacterial strains
    • Ezaki, T., Hashimoto, Y. & Yabuuchi, E. (1989). Fluorometric deoxyribonucleic acid-deoxyribonucleic acid hybridization in microdilution wells as an alternative to membrane filter hybridization in which radioisotopes are used to determine genetic relatedness among bacterial strains. Int J Syst Bacteriol 39, 224-229.
    • (1989) Int J Syst Bacteriol , vol.39 , pp. 224-229
    • Ezaki, T.1    Hashimoto, Y.2    Yabuuchi, E.3
  • 5
    • 0019797407 scopus 로고
    • Evolutionary trees from DNA sequences: A maximum likelihood approach
    • Felsenstein, J. (1981). Evolutionary trees from DNA sequences: a maximum likelihood approach. J Mol Evol 17, 368-376.
    • (1981) J Mol Evol , vol.17 , pp. 368-376
    • Felsenstein, J.1
  • 6
    • 0000461280 scopus 로고
    • Confidence limits on phylogenies: An approach using the bootstrap
    • Felsenstein, J. (1985). Confidence limits on phylogenies: an approach using the bootstrap. Evolution 39, 783-791.
    • (1985) Evolution , vol.39 , pp. 783-791
    • Felsenstein, J.1
  • 7
    • 34548159001 scopus 로고    scopus 로고
    • Felsenstein, J, 1993, PHYLIP (phylogeny inference package) version 3.5c. Distributed by the author. Department of Genome Sciences, University of Washington, Seattle, USA
    • Felsenstein, J. (1993). PHYLIP (phylogeny inference package) version 3.5c. Distributed by the author. Department of Genome Sciences, University of Washington, Seattle, USA.
  • 8
    • 0021077093 scopus 로고
    • A rapid analysis for chemical grouping of aerobic actinomycetes
    • Hasegawa, T., Takizawa, M. & Tanida, S. (1983). A rapid analysis for chemical grouping of aerobic actinomycetes. J Gen Appl Microbiol 29, 319-322.
    • (1983) J Gen Appl Microbiol , vol.29 , pp. 319-322
    • Hasegawa, T.1    Takizawa, M.2    Tanida, S.3
  • 9
    • 0034985479 scopus 로고    scopus 로고
    • Amycolatopsis rubida sp. nov., a new Amycolatopsis species from soil
    • Huang, Y., Qi, W., Lu, Z., Liu, Z. & Goodfellow, M. (2001). Amycolatopsis rubida sp. nov., a new Amycolatopsis species from soil. Int J Syst Evol Microbiol 51, 1093-1097.
    • (2001) Int J Syst Evol Microbiol , vol.51 , pp. 1093-1097
    • Huang, Y.1    Qi, W.2    Lu, Z.3    Liu, Z.4    Goodfellow, M.5
  • 10
    • 0019296687 scopus 로고
    • A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences
    • Kimura, M. (1980). A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences. J Mol Evol 16, 111-120.
    • (1980) J Mol Evol , vol.16 , pp. 111-120
    • Kimura, M.1
  • 11
    • 0001579749 scopus 로고
    • Fatty acid and menaquinone analysis of actinomycetes and related organisms
    • Edited by M. Goodfellow & D. E. Minnikin. London: Academic Press
    • Kroppenstedt, R. M. (1985). Fatty acid and menaquinone analysis of actinomycetes and related organisms. In Chemical Methods in Bacterial Systematics, pp. 173-199. Edited by M. Goodfellow & D. E. Minnikin. London: Academic Press.
    • (1985) Chemical Methods in Bacterial Systematics , pp. 173-199
    • Kroppenstedt, R.M.1
  • 12
    • 0002044672 scopus 로고
    • Chemical composition as a criterion in the classification of aerobic actinomycetes
    • Lechevalier, M. P. & Lechevalier, H. A. (1970). Chemical composition as a criterion in the classification of aerobic actinomycetes. Int J Syst Bacteriol 20, 435-443.
    • (1970) Int J Syst Bacteriol , vol.20 , pp. 435-443
    • Lechevalier, M.P.1    Lechevalier, H.A.2
  • 13
    • 0001551934 scopus 로고
    • The chemotaxonomy of actinomycetes
    • Society for Industrial Microbiology Special Publication no. 6, pp, Edited by A. Dietz & D. W. Thayer. Arlington, VA: Society for Industrial Microbiology
    • Lechevalier, H. A. & Lechevalier, M. P. (1980). The chemotaxonomy of actinomycetes. In Actinomycete Taxonomy (Society for Industrial Microbiology Special Publication no. 6), pp. 277-284. Edited by A. Dietz & D. W. Thayer. Arlington, VA: Society for Industrial Microbiology.
    • (1980) Actinomycete Taxonomy , pp. 277-284
    • Lechevalier, H.A.1    Lechevalier, M.P.2
  • 14
    • 0022656043 scopus 로고
    • Two new genera of nocardioform actinomycetes: Amycolata gen. nov. and Amycolatopsis gen. nov
    • Lechevalier, M. P., Prauser, H., Labeda, D. P. & Ruan, J. S. (1986). Two new genera of nocardioform actinomycetes: Amycolata gen. nov. and Amycolatopsis gen. nov. Int J Syst Bacteriol 36, 29-37.
    • (1986) Int J Syst Bacteriol , vol.36 , pp. 29-37
    • Lechevalier, M.P.1    Prauser, H.2    Labeda, D.P.3    Ruan, J.S.4
  • 15
    • 0035073398 scopus 로고    scopus 로고
    • Amycolatopsis albidoflavus sp. nov
    • Lee, S. D. & Hah, Y. C. (2001). Amycolatopsis albidoflavus sp. nov. Int J Syst Evol Microbiol 51, 645-650.
    • (2001) Int J Syst Evol Microbiol , vol.51 , pp. 645-650
    • Lee, S.D.1    Hah, Y.C.2
  • 16
    • 31144434143 scopus 로고    scopus 로고
    • Reclassification of Amycolatopsis orientalis DSM 43387 as Amycolatopsis benzoatilytica sp. nov
    • Majumdar, S., Prabhagaran, S. R., Shivaji, S. & Lal, R. (2006). Reclassification of Amycolatopsis orientalis DSM 43387 as Amycolatopsis benzoatilytica sp. nov. Int J Syst Evol Microbiol 56, 199-204.
    • (2006) Int J Syst Evol Microbiol , vol.56 , pp. 199-204
    • Majumdar, S.1    Prabhagaran, S.R.2    Shivaji, S.3    Lal, R.4
  • 17
    • 0000198211 scopus 로고
    • Precise measurement of the G + C content of deoxyribonucleic acid by high-performance liquid chromatography
    • Mesbah, M., Premachandran, U. & Whitman, W. B. (1989). Precise measurement of the G + C content of deoxyribonucleic acid by high-performance liquid chromatography. Int J Syst Bacteriol 39, 159-167.
    • (1989) Int J Syst Bacteriol , vol.39 , pp. 159-167
    • Mesbah, M.1    Premachandran, U.2    Whitman, W.B.3
  • 18
    • 0018834020 scopus 로고
    • Thin layer chromatography of methanolysates of mycolic acid-containing bacteria
    • Minnikin, D. E., Hutchinson, I. G., Caldicott, A. B. & Goodfellow, M. (1980). Thin layer chromatography of methanolysates of mycolic acid-containing bacteria. J Chromatogr 188, 221-233.
    • (1980) J Chromatogr , vol.188 , pp. 221-233
    • Minnikin, D.E.1    Hutchinson, I.G.2    Caldicott, A.B.3    Goodfellow, M.4
  • 20
    • 0023375195 scopus 로고
    • The neighbor-joining method: A new method for reconstructing phylogenetic trees
    • Saitou, N. & Nei, M. (1987). The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol Biol Evol 4, 406-425.
    • (1987) Mol Biol Evol , vol.4 , pp. 406-425
    • Saitou, N.1    Nei, M.2
  • 23
    • 0016202002 scopus 로고
    • Simplified approach to identification of aerobic actinomycetes by thin-layer chromatography
    • Staneck, J. L. & Roberts, G. D. (1974). Simplified approach to identification of aerobic actinomycetes by thin-layer chromatography. Appl Microbiol 28, 226-231.
    • (1974) Appl Microbiol , vol.28 , pp. 226-231
    • Staneck, J.L.1    Roberts, G.D.2
  • 24
    • 0031574072 scopus 로고    scopus 로고
    • The CLUSTAL_X windows interface: Flexible strategies for multiple sequence alignment aided by quality analysis tools
    • Thompson, J. D., Gibson, T. J., Plewniak, F., Jeanmougin, F. & Higgins, D. G. (1997). The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Res 25, 4876-4882.
    • (1997) Nucleic Acids Res , vol.25 , pp. 4876-4882
    • Thompson, J.D.1    Gibson, T.J.2    Plewniak, F.3    Jeanmougin, F.4    Higgins, D.G.5
  • 25
    • 0028220240 scopus 로고
    • A phylogenetic analysis of the family Pseudonocardiaceae and the genera Actinokineospora and Saccharothrix with 16S rRNA sequences and a proposal to combine the genera Amycolata and Pseudonocardia in an emended genus Pseudonocardia
    • Warwick, S., Bowen, T., McVeigh, H. & Embley, T. M. (1994). A phylogenetic analysis of the family Pseudonocardiaceae and the genera Actinokineospora and Saccharothrix with 16S rRNA sequences and a proposal to combine the genera Amycolata and Pseudonocardia in an emended genus Pseudonocardia. Int J Syst Bacteriol 44, 293-299.
    • (1994) Int J Syst Bacteriol , vol.44 , pp. 293-299
    • Warwick, S.1    Bowen, T.2    McVeigh, H.3    Embley, T.M.4
  • 28
    • 0007593441 scopus 로고
    • Structural analysis of molecular species of nocardomycolic acids from Nocardia erythropolis by the combined system of gas chromatography and mass spectrometry
    • Yano, I., Saito, K., Fukukawa, Y. & Kusunose, M. (1972). Structural analysis of molecular species of nocardomycolic acids from Nocardia erythropolis by the combined system of gas chromatography and mass spectrometry. FEBS Lett 21, 215-219.
    • (1972) FEBS Lett , vol.21 , pp. 215-219
    • Yano, I.1    Saito, K.2    Fukukawa, Y.3    Kusunose, M.4


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