메뉴 건너뛰기




Volumn 57, Issue 8, 2007, Pages 1689-1693

Sediminitomix flava gen. nov., sp. nov., of the phylum Bacteroidetes, isolated from marine sediment

Author keywords

[No Author keywords available]

Indexed keywords

FATTY ACID; QUINONE DERIVATIVE; RNA 16S;

EID: 34548190598     PISSN: 14665026     EISSN: None     Source Type: Journal    
DOI: 10.1099/ijs.0.64854-0     Document Type: Article
Times cited : (14)

References (26)
  • 3
    • 0035989637 scopus 로고    scopus 로고
    • Proposed minimal standards for describing new taxa of the family Flavobacteriaceae and emended description of the family
    • Bernardet, J.-F., Nakagawa, Y. & Holmes, B. (2002). Proposed minimal standards for describing new taxa of the family Flavobacteriaceae and emended description of the family, Int J Syst Evol Microbiol 52, 1049-1070.
    • (2002) Int J Syst Evol Microbiol , vol.52 , pp. 1049-1070
    • Bernardet, J.-F.1    Nakagawa, Y.2    Holmes, B.3
  • 4
    • 1842362290 scopus 로고
    • Complete nucleotide sequence of a 16S ribosomal RNA gene from Escherichia coli
    • Brosius, J., Palmer, M. L., Kennedy, P. J. & Noller, H. F. (1978). Complete nucleotide sequence of a 16S ribosomal RNA gene from Escherichia coli. Proc Natl Acad Sci U S A 75, 4801-4805.
    • (1978) Proc Natl Acad Sci U S A , vol.75 , pp. 4801-4805
    • Brosius, J.1    Palmer, M.L.2    Kennedy, P.J.3    Noller, H.F.4
  • 5
    • 85081447681 scopus 로고    scopus 로고
    • Cowan, S. T. & Steel, K. J. (1993). Manual for the Identification of Medical Bacteria, 3rd edn. London: Cambridge University Press. Fautz, E. & Reichenbach, H. (1980). A simple test for flexirubin-type pigments. FEMS Microbiol Lett 8, 87-91.
    • Cowan, S. T. & Steel, K. J. (1993). Manual for the Identification of Medical Bacteria, 3rd edn. London: Cambridge University Press. Fautz, E. & Reichenbach, H. (1980). A simple test for flexirubin-type pigments. FEMS Microbiol Lett 8, 87-91.
  • 6
    • 0000461280 scopus 로고
    • Confidence limits on phylogenies: An approach using the bootstrap
    • Felsenstein, J. (1985). Confidence limits on phylogenies: an approach using the bootstrap. Evolution 39, 783-791.
    • (1985) Evolution , vol.39 , pp. 783-791
    • Felsenstein, J.1
  • 8
    • 0028064005 scopus 로고
    • Automated sequencing of PCR-amplified 16S rDNA on 'Hydrolink' gels
    • Hiraishi, A., Shin, Y. K., Ueda, Y. & Sugiyama, J. (1994). Automated sequencing of PCR-amplified 16S rDNA on 'Hydrolink' gels. J Microbiol Methods 19, 145-154.
    • (1994) J Microbiol Methods , vol.19 , pp. 145-154
    • Hiraishi, A.1    Shin, Y.K.2    Ueda, Y.3    Sugiyama, J.4
  • 9
    • 0024451276 scopus 로고
    • Thermonema lapsum gen. nov., sp. nov., a thermophilic gliding bacterium
    • Hudson, J. A., Schofield, K. M., Morgan, H. W. & Daniel, R. M. (1989). Thermonema lapsum gen. nov., sp. nov., a thermophilic gliding bacterium. Int J Syst Bacteriol 39, 485-487.
    • (1989) Int J Syst Bacteriol , vol.39 , pp. 485-487
    • Hudson, J.A.1    Schofield, K.M.2    Morgan, H.W.3    Daniel, R.M.4
  • 10
    • 77049130214 scopus 로고
    • The taxonomic significance of fermentative versus oxidative metabolism of carbohydrates by various Gram negative bacteria
    • Hugh, R. & Leifson, E. (1953). The taxonomic significance of fermentative versus oxidative metabolism of carbohydrates by various Gram negative bacteria. J Bacteriol 66, 24-26.
    • (1953) J Bacteriol , vol.66 , pp. 24-26
    • Hugh, R.1    Leifson, E.2
  • 11
  • 12
    • 0014793620 scopus 로고
    • Flexithrix dorotheae gen. et sp. nov. (Flexibacterales); and suggestions for reclassifying sheathed bacteria
    • Lewin, R. A. (1970). Flexithrix dorotheae gen. et sp. nov. (Flexibacterales); and suggestions for reclassifying sheathed bacteria. Can J Microbiol 16, 511-515.
    • (1970) Can J Microbiol , vol.16 , pp. 511-515
    • Lewin, R.A.1
  • 13
    • 0014585406 scopus 로고
    • Isolation, cultivation and characterization of flexibacteria
    • Lewin, R. A. & Lounsbery, D. C. (1969). Isolation, cultivation and characterization of flexibacteria. J Gen Microbiol 58, 145-170.
    • (1969) J Gen Microbiol , vol.58 , pp. 145-170
    • Lewin, R.A.1    Lounsbery, D.C.2
  • 14
    • 0000198211 scopus 로고
    • Precise measurement of the G + C content of deoxyribonucleic acid by high-performance liquid chromatography
    • Mesbah, M., Premachandran, U. & Whitman, W. B. (1989). Precise measurement of the G + C content of deoxyribonucleic acid by high-performance liquid chromatography. Int J Syst Bacteriol 39, 159-167.
    • (1989) Int J Syst Bacteriol , vol.39 , pp. 159-167
    • Mesbah, M.1    Premachandran, U.2    Whitman, W.B.3
  • 15
    • 0002338297 scopus 로고
    • Division of rhizobitoxine-producing and hydrogen-uptake positive strains of Bradyrhizobium japonicum by nifDKE sequence divergence
    • Minamisawa, K. (1990). Division of rhizobitoxine-producing and hydrogen-uptake positive strains of Bradyrhizobium japonicum by nifDKE sequence divergence. Plant Cell Physiol 31, 81-89.
    • (1990) Plant Cell Physiol , vol.31 , pp. 81-89
    • Minamisawa, K.1
  • 16
    • 0027184337 scopus 로고
    • Phylogenetic diversity of the genus Cytophaga revealed by 16S rRNA sequencing and menaquinone analysis
    • Nakagawa, Y. & Yamasato, K. (1993). Phylogenetic diversity of the genus Cytophaga revealed by 16S rRNA sequencing and menaquinone analysis. J Gen Microbiol 139, 1155-1161.
    • (1993) J Gen Microbiol , vol.139 , pp. 1155-1161
    • Nakagawa, Y.1    Yamasato, K.2
  • 17
    • 0031033545 scopus 로고    scopus 로고
    • Reclassification of Cytophaga aprica (Lewin 1969) Reichenbach 1989 in Flammeovirga gen. nov., as Flammeovirga aprica comb. nov. and of Cytophaga diffluens (ex Stanier 1940; emend. Lewin 1969) Reichenbach 1989 in Persicobacter gen. nov. as Persicobacter diffluens comb. nov
    • Nakagawa, Y., Hamana, K., Sakane, T. & Yamasato, K. (1997). Reclassification of Cytophaga aprica (Lewin 1969) Reichenbach 1989 in Flammeovirga gen. nov., as Flammeovirga aprica comb. nov. and of Cytophaga diffluens (ex Stanier 1940; emend. Lewin 1969) Reichenbach 1989 in Persicobacter gen. nov. as Persicobacter diffluens comb. nov. Int J Syst Bacteriol 47, 220-223.
    • (1997) Int J Syst Bacteriol , vol.47 , pp. 220-223
    • Nakagawa, Y.1    Hamana, K.2    Sakane, T.3    Yamasato, K.4
  • 18
    • 0015909084 scopus 로고
    • Gliding motility in some non-spreading flexi-bacteria
    • Perry, L. B. (1973). Gliding motility in some non-spreading flexi-bacteria. J Appl Bacteriol 36 227-232.
    • (1973) J Appl Bacteriol , vol.36 , pp. 227-232
    • Perry, L.B.1
  • 19
    • 85081446887 scopus 로고    scopus 로고
    • Reichenbach, H. (1989). Genus I. Cytophaga, pp. 2015-2050. In Bergey's Manual of Systematic Bacteriology, 3. Edited by J. T. Staley, M. P. Bryant, N. Pfennig & J. G. Holt. Baltimore, MD: The Williams & Wilkins Co.
    • Reichenbach, H. (1989). Genus I. Cytophaga, pp. 2015-2050. In Bergey's Manual of Systematic Bacteriology, vol. 3. Edited by J. T. Staley, M. P. Bryant, N. Pfennig & J. G. Holt. Baltimore, MD: The Williams & Wilkins Co.
  • 20
    • 0023375195 scopus 로고
    • The neighbor-joining method: A new method for reconstructing phylogenetic trees
    • Saitou, N. & Nei, M. (1987). The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol Biol Evol 4, 406-425.
    • (1987) Mol Biol Evol , vol.4 , pp. 406-425
    • Saitou, N.1    Nei, M.2
  • 21
    • 0004469194 scopus 로고
    • Analysis of pigments: Carotenoids and related polyenes
    • Edited by M. Goodfellow & A. G. O'Donnell. West Sussex: John Wiley & Sons
    • Schmidt, K., Connor, A. & Britton, G. (1994). Analysis of pigments: carotenoids and related polyenes. In Chemical Methods in Prokaryotic Systematics, pp. 403-461. Edited by M. Goodfellow & A. G. O'Donnell. West Sussex: John Wiley & Sons.
    • (1994) Chemical Methods in Prokaryotic Systematics , pp. 403-461
    • Schmidt, K.1    Connor, A.2    Britton, G.3
  • 22
    • 0020696808 scopus 로고
    • Taxonomy (and ecology) of Flavobacterium and related genera
    • Shewan, J. M. & McMeekin, T. A. (1983). Taxonomy (and ecology) of Flavobacterium and related genera. Annu Rev Microbiol 37, 233-252.
    • (1983) Annu Rev Microbiol , vol.37 , pp. 233-252
    • Shewan, J.M.1    McMeekin, T.A.2
  • 23
    • 0004217184 scopus 로고
    • General characterization
    • Edited by P. Gerhardt, R. G. E. Murray, R. N. Costilow, E. W. Nester, W. A. Wood, N. R. Krieg & G. B. Phillips. Washington, DC: American Society for Microbiology
    • Smibert, R. M. & Krieg, N. R. (1981). General characterization. In Manual of Methods for General Bacteriology, pp. 409-443. Edited by P. Gerhardt, R. G. E. Murray, R. N. Costilow, E. W. Nester, W. A. Wood, N. R. Krieg & G. B. Phillips. Washington, DC: American Society for Microbiology.
    • (1981) Manual of Methods for General Bacteriology , pp. 409-443
    • Smibert, R.M.1    Krieg, N.R.2
  • 24
    • 85081441888 scopus 로고    scopus 로고
    • Swofford, D. L, 2000, PAUP*: Phylogenetic analysis using parsimony *and other methods, version 4. Sunderland, MA: Sinauer Associates
    • Swofford, D. L. (2000). PAUP*: Phylogenetic analysis using parsimony (*and other methods), version 4. Sunderland, MA: Sinauer Associates.
  • 25
    • 33748999282 scopus 로고    scopus 로고
    • Emendation of the genus Flammeovirga and Flammeovirga aprica with the proposal of Flammeovirga arenaria nom. rev., comb. nov., and Flammeovirga yaeyamensis sp. nov
    • Takahashi, M., Suzuki, K.-I. & Nakagawa, Y. (2006). Emendation of the genus Flammeovirga and Flammeovirga aprica with the proposal of Flammeovirga arenaria nom. rev., comb. nov., and Flammeovirga yaeyamensis sp. nov. Int J Syst Evol Microbiol 56, 2095-2100.
    • (2006) Int J Syst Evol Microbiol , vol.56 , pp. 2095-2100
    • Takahashi, M.1    Suzuki, K.-I.2    Nakagawa, Y.3
  • 26
    • 0031574072 scopus 로고    scopus 로고
    • The CLUSTAL_X windows interface: Flexible strategies for multiple sequence alignment aided by quality analysis tools
    • Thompson, J. D., Gibson, T. J., Plewniak, F., Jeanmougin, F. & Higgins, D. G. (1997). The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Res 25, 4876-4882.
    • (1997) Nucleic Acids Res , vol.25 , pp. 4876-4882
    • Thompson, J.D.1    Gibson, T.J.2    Plewniak, F.3    Jeanmougin, F.4    Higgins, D.G.5


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.