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Volumn 23, Issue 15, 2007, Pages 1978-1985

Simple and fast alignment of metabolic pathways by exploiting local diversity

Author keywords

[No Author keywords available]

Indexed keywords

ALGORITHM; ARTICLE; BIODIVERSITY; BIOINFORMATICS; COMPUTER PROGRAM; DATA BASE; HUMAN; HUMAN COMPUTER INTERACTION; INTERMETHOD COMPARISON; METABOLISM; NONHUMAN; PRIORITY JOURNAL; SEQUENCE ANALYSIS;

EID: 34548141879     PISSN: 13674803     EISSN: 13674811     Source Type: Journal    
DOI: 10.1093/bioinformatics/btm279     Document Type: Article
Times cited : (30)

References (15)
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    • Hajiaghayi,M. and Nishimu,N. (2002) Subgraph isomorphism, log-bounded fragmentation and graphs of (locally) bounded treewidth. In Proceedings of the 27th International. Symposium on Mathematical Foundations of Computer Science (MFCS'02), volume 2420 of Lecture Notes in Computer Science, Springer-Verlag, Berlin, pp.305-318.
    • (2002) Lecture Notes in Computer Science , vol.2420 , pp. 305-318
    • Hajiaghayi, M.1    Nishimu, N.2
  • 5
    • 27244436714 scopus 로고    scopus 로고
    • Expansion of the BioCyc collection of pathway/genome databases to 160 genomes
    • Karp,P.D. et al. (2005) Expansion of the BioCyc collection of pathway/genome databases to 160 genomes. Nucleic Acids Res., 19 6083-6089.
    • (2005) Nucleic Acids Res , vol.19 , pp. 6083-6089
    • Karp, P.D.1
  • 6
    • 3442886313 scopus 로고    scopus 로고
    • PathBLAST: A tool for alignment of protein interaction networks
    • Kelley,B.P. et al. (2004) PathBLAST: A tool for alignment of protein interaction networks. Nucleic Acids Res., 32, 83-88.
    • (2004) Nucleic Acids Res , vol.32 , pp. 83-88
    • Kelley, B.P.1
  • 7
    • 0346084492 scopus 로고
    • On the complexity of finding iso- and other morphisms for partial k-trees
    • Matoušek, J. and Thomas,R. (1992) On the complexity of finding iso- and other morphisms for partial k-trees. Discrete Math., 108 343-364.
    • (1992) Discrete Math , vol.108 , pp. 343-364
    • Matoušek, J.1    Thomas, R.2
  • 9
    • 35048839072 scopus 로고    scopus 로고
    • Pinter,R.Y. et al. (2004) Approximate labelled subtree homeomorphism. In Proceedings of 15th CPM, 3109 of Lecture Notes in Computer Science, Springer-Verlag, Berlin, pp. 59-73.
    • Pinter,R.Y. et al. (2004) Approximate labelled subtree homeomorphism. In Proceedings of 15th CPM, volume 3109 of Lecture Notes in Computer Science, Springer-Verlag, Berlin, pp. 59-73.
  • 10
    • 24044488288 scopus 로고    scopus 로고
    • Alignment of metabolic pathways
    • Finter,R.Y. et al. (2005) Alignment of metabolic pathways. Bioinformatics, 21, 3401-3408.
    • (2005) Bioinformatics , vol.21 , pp. 3401-3408
    • Finter, R.Y.1
  • 11
    • 33645732240 scopus 로고    scopus 로고
    • Modeling cellular machinery through biological network comparison
    • Shara,R. and Ideker,T. (2006) Modeling cellular machinery through biological network comparison. Nat. Biotechnol., 24, 427-433.
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    • Shara, R.1    Ideker, T.2
  • 12
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    • QPath: A method for querying pathways in a protein-protein interaction network
    • Shlomi,T. et al. (2006) QPath: A method for querying pathways in a protein-protein interaction network. BMC Bioinformatics, 7, 199.
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    • Shlomi, T.1
  • 15
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    • Wernicke,S. (2006) Efficient detection of network motifs. IEEE/ACM Trans. Compu. Biol. Bioinform., 3, 347-359.
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* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.