메뉴 건너뛰기




Volumn , Issue , 2000, Pages 376-383

A Multiple Alignment Algorithm for Metabolic Pathway Analysis using Enzyme Hierarchy

Author keywords

alignment; EC number; enzyme; metabolic pathway; pathway analysis

Indexed keywords

METABOLISM; NUMBERING SYSTEMS;

EID: 0034565517     PISSN: None     EISSN: None     Source Type: Conference Proceeding    
DOI: None     Document Type: Conference Paper
Times cited : (79)

References (13)
  • 1
    • 0033977576 scopus 로고    scopus 로고
    • WIT: Intergrated System for High-Throughput Genome Sequence Analysis and Metabolic Reconstruction
    • (Available at)
    • Overbeek, R., Larsen, N., Pusch, G. D., D'Souza, M., Selkov, E. Jr, Kyrpides, N., Fonstein, M., Maltsev, N., and Selkov, E. 2000. WIT: Intergrated System for High-Throughput Genome Sequence Analysis and Metabolic Reconstruction, Nucleic Acids Research, 28 (1) :123-125 (Available at: http://wit.mcs.anl.gov/WIT2/).
    • (2000) Nucleic Acids Research , vol.28 , Issue.1 , pp. 123-125
    • Overbeek, R.1    Larsen, N.2    Pusch, G. D.3    D'Souza, M.4    Selkov, E.5    Kyrpides, N.6    Fonstein, M.7    Maltsev, N.8    Selkov, E.9
  • 2
    • 0032919364 scopus 로고    scopus 로고
    • KEGG: Kyoto Encyclopedia of Genes and Genomes
    • (Available at)
    • Ogata, H., Goto, S., Sato, K., Fujibuchi, W., Bono, H. and Kanehisa, M. 1999. KEGG: Kyoto Encyclopedia of Genes and Genomes, Nucleic Acids Research, 27 (1) :29-34 (Available at: http://www.genome.ad.jp/kegg/).
    • (1999) Nucleic Acids Research , vol.27 , Issue.1 , pp. 29-34
    • Ogata, H.1    Goto, S.2    Sato, K.3    Fujibuchi, W.4    Bono, H.5    Kanehisa, M.6
  • 3
    • 0033215210 scopus 로고    scopus 로고
    • Pathway Alignment: Application to the Comparative Analysis of Glycolytic Enzymes
    • Dandekar, T., Schuster, S., Snel, B., Huynen, M. and Bork, P. 1999. Pathway Alignment: Application to the Comparative Analysis of Glycolytic Enzymes, Biochemical J., 343 (1) :115-124.
    • (1999) Biochemical J , vol.343 , Issue.1 , pp. 115-124
    • Dandekar, T.1    Schuster, S.2    Snel, B.3    Huynen, M.4    Bork, P.5
  • 4
    • 2042440312 scopus 로고
    • Identification of Qualitatively Feasible Metabolic Pathways
    • (Hunter, L. (ed)), AAAI Press/MIT Press, Menlo Park
    • Mavrovouniotis, M. L. 1993. Identification of Qualitatively Feasible Metabolic Pathways, Artificial Intelligence and Molecular Biology (Hunter, L. (ed.)), AAAI Press/MIT Press, Menlo Park, 325-364.
    • (1993) Artificial Intelligence and Molecular Biology , pp. 325-364
    • Mavrovouniotis, M. L.1
  • 7
    • 0031966808 scopus 로고    scopus 로고
    • Reconstruction of Amino Acid Biosynthesis Pathways from the Complete Genome Sequence
    • Bono, H., Ogata, H., Goto, S. and Kanehisa, M. 1998. Reconstruction of Amino Acid Biosynthesis Pathways from the Complete Genome Sequence. Genome Research, 8 (3) :203-210.
    • (1998) Genome Research , vol.8 , Issue.3 , pp. 203-210
    • Bono, H.1    Ogata, H.2    Goto, S.3    Kanehisa, M.4
  • 8
    • 0032744302 scopus 로고    scopus 로고
    • Evolution of Metabolisms: A New Method for the Comparison of Metabolic Pathways Using Genomics Information
    • Forst, V. C. and Schulten K. 1999. Evolution of Metabolisms: A New Method for the Comparison of Metabolic Pathways Using Genomics Information, J. Computational Biology, 6 (3) :343-360.
    • (1999) J. Computational Biology , vol.6 , Issue.3 , pp. 343-360
    • Forst, V. C.1    Schulten, K.2
  • 9
    • 0031666414 scopus 로고    scopus 로고
    • Analogous Enzymes: Independent Inventions in Enzyme Evolution
    • Galperin, M. Y., Walker, D. R. and Koonin, E. V. 1998. Analogous Enzymes: Independent Inventions in Enzyme Evolution, Genome Research, 8 (8) :779-790.
    • (1998) Genome Research , vol.8 , Issue.8 , pp. 779-790
    • Galperin, M. Y.1    Walker, D. R.2    Koonin, E. V.3
  • 12
    • 0014757386 scopus 로고
    • A General Method Applicable to the Search for Similarities in the Amino Acid Sequences of Two Proteins
    • Needleman, S. B. and Wunsch, C. D. 1970. A General Method Applicable to the Search for Similarities in the Amino Acid Sequences of Two Proteins, J. Mol. Biol, 48:444-453.
    • (1970) J. Mol. Biol , vol.48 , pp. 444-453
    • Needleman, S. B.1    Wunsch, C. D.2
  • 13
    • 0023084055 scopus 로고
    • Progressive Sequence Alignment as a Prerequisite to Correct Phylogenetic Trees
    • Feng, D. and Doolittle, R. F. 1987. Progressive Sequence Alignment as a Prerequisite to Correct Phylogenetic Trees, J. Mol. Evol., 25:351-360.
    • (1987) J. Mol. Evol , vol.25 , pp. 351-360
    • Feng, D.1    Doolittle, R. F.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.