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Volumn 70, Issue 3, 2007, Pages 528-534

Retrotransposon insertion-site context (RISC) typing: A novel typing method for Aspergillus fumigatus and a convenient PCR alternative to restriction fragment length polymorphism analysis

Author keywords

Afut1; Aspergillus fumigatus; Fingerprint; PCR; Retrotransposon; RFLP; Typing

Indexed keywords

ARTICLE; ASPERGILLUS FUMIGATUS; CONTROLLED STUDY; DISCRIMINANT ANALYSIS; FUNGUS ISOLATION; LONG TERMINAL REPEAT; NONHUMAN; NUCLEIC ACID ANALYSIS; POLYMERASE CHAIN REACTION; PRIORITY JOURNAL; RESTRICTION FRAGMENT LENGTH POLYMORPHISM; RETROPOSON; RETROTRANSPOSON INSERTION SITE CONTEXT TYPING;

EID: 34548127696     PISSN: 01677012     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.mimet.2007.06.009     Document Type: Article
Times cited : (14)

References (12)
  • 1
    • 0026794926 scopus 로고
    • Use of randomly amplified polymorphic DNA markers to distinguish isolates of Aspergillus fumigatus
    • Aufauvre-Brown A., Cohen J., and Holden D.W. Use of randomly amplified polymorphic DNA markers to distinguish isolates of Aspergillus fumigatus. J. Clin. Microbiol. 30 (1992) 2991-2993
    • (1992) J. Clin. Microbiol. , vol.30 , pp. 2991-2993
    • Aufauvre-Brown, A.1    Cohen, J.2    Holden, D.W.3
  • 3
    • 0030873053 scopus 로고    scopus 로고
    • Genetic diversity among clinical and environmental isolates of Aspergillus fumigatus
    • Debeaupuis J., Sarfati J., Chazalet V., and Latge J. Genetic diversity among clinical and environmental isolates of Aspergillus fumigatus. Infect. Immun. 65 (1997) 3080-3085
    • (1997) Infect. Immun. , vol.65 , pp. 3080-3085
    • Debeaupuis, J.1    Sarfati, J.2    Chazalet, V.3    Latge, J.4
  • 4
    • 23744504447 scopus 로고    scopus 로고
    • Use of a novel panel of nine short tandem repeats fore exact and high-resolution fingerprinting of Aspergillus fumigatus isolates
    • de Valk H.A., Meis J.F.G.M., Curfs I.M., Muehlethaler K., Mouton J.W., and Klaassen C.H.W. Use of a novel panel of nine short tandem repeats fore exact and high-resolution fingerprinting of Aspergillus fumigatus isolates. J. Clin. Microbiol. 43 (2005) 4112-4120
    • (2005) J. Clin. Microbiol. , vol.43 , pp. 4112-4120
    • de Valk, H.A.1    Meis, J.F.G.M.2    Curfs, I.M.3    Muehlethaler, K.4    Mouton, J.W.5    Klaassen, C.H.W.6
  • 5
    • 34248547161 scopus 로고    scopus 로고
    • Comparison of two highly discriminatory molecular fingerprinting assays for analysis of multiple Aspergillus fumigatus isolates from patients with invasive aspergillosis
    • de Valk H.A., Meis J.F.G.M., and Klaassen C.H.W. Comparison of two highly discriminatory molecular fingerprinting assays for analysis of multiple Aspergillus fumigatus isolates from patients with invasive aspergillosis. J. Clin. Microbiol. 45 (2007) 1415-1419
    • (2007) J. Clin. Microbiol. , vol.45 , pp. 1415-1419
    • de Valk, H.A.1    Meis, J.F.G.M.2    Klaassen, C.H.W.3
  • 7
    • 0029924326 scopus 로고    scopus 로고
    • Afut1, a retrotransposon-like element from Aspergillus fumigatus
    • Neuveglise C., Sarfati J., Latge J., and Paris S. Afut1, a retrotransposon-like element from Aspergillus fumigatus. Nucl. Acids Res. 24 (1996) 1428-1434
    • (1996) Nucl. Acids Res. , vol.24 , pp. 1428-1434
    • Neuveglise, C.1    Sarfati, J.2    Latge, J.3    Paris, S.4
  • 8
    • 0034890466 scopus 로고    scopus 로고
    • A family of DNA repeats in Aspergillus nidulans has assimilated degenerated retrotransposons
    • Nielsen M.L., Hermansen T.D., and Aleksenko A. A family of DNA repeats in Aspergillus nidulans has assimilated degenerated retrotransposons. Mol. Genet. Genomics 265 (2001) 883-887
    • (2001) Mol. Genet. Genomics , vol.265 , pp. 883-887
    • Nielsen, M.L.1    Hermansen, T.D.2    Aleksenko, A.3
  • 10
    • 0041423398 scopus 로고    scopus 로고
    • Partial retrotransposon-like DNA sequence in the genomic clone of Aspergillus flavus, pAF28
    • Okubara P.A., Tibbot B.K., Tarun A.S., McAlpin C.E., and Hua S.S. Partial retrotransposon-like DNA sequence in the genomic clone of Aspergillus flavus, pAF28. Mycol. Res. 107 (2003) 841-846
    • (2003) Mycol. Res. , vol.107 , pp. 841-846
    • Okubara, P.A.1    Tibbot, B.K.2    Tarun, A.S.3    McAlpin, C.E.4    Hua, S.S.5
  • 11
    • 0031574072 scopus 로고    scopus 로고
    • The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools
    • Thompson J.D., Gibson T.J., Plewniak F., Jeanmougin F., and Higgins D.G. The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucl. Acids Res. 25 (1997) 4876-4882
    • (1997) Nucl. Acids Res. , vol.25 , pp. 4876-4882
    • Thompson, J.D.1    Gibson, T.J.2    Plewniak, F.3    Jeanmougin, F.4    Higgins, D.G.5
  • 12
    • 0041419052 scopus 로고    scopus 로고
    • Molecular epidemiology of Aspergillus fumigatus isolates recovered from water, air, and patients shows two clusters of genetically distinct strains
    • Warris A., Klaassen C.H.W., Meis J.F.G.M., de Ruiter M.T., de Valk H.A., Abrahamsen T.G., Gaustad P., and Verweij P.E. Molecular epidemiology of Aspergillus fumigatus isolates recovered from water, air, and patients shows two clusters of genetically distinct strains. J. Clin. Microbiol. 41 (2003) 4101-4106
    • (2003) J. Clin. Microbiol. , vol.41 , pp. 4101-4106
    • Warris, A.1    Klaassen, C.H.W.2    Meis, J.F.G.M.3    de Ruiter, M.T.4    de Valk, H.A.5    Abrahamsen, T.G.6    Gaustad, P.7    Verweij, P.E.8


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.