Hungarian mtDNA population databases from Budapest and the Baranya county Roma

International Journal of Legal Medicine

Volumn 121, Issue 5, 2007, Pages 377-383

  Irwin, Jodi ^a   Egyed, Balazs ^b   Saunier, Jessica ^a   Szamosi, Gabriella ^b   O'Callaghan, Jennifer ^a   Padar, Zsolt ^b   Parsons, Thomas J ^a,c  

^a ARMED FORCES INSTITUTE OF PATHOLOGY   (United States)

^b Institute for Forensic Sciences Budapest   (Hungary)

^c International Commission on Missing Persons   (Bosnia and Herzegovina)

Author keywords

Baranya county; mtDNA; Romani population

Indexed keywords

MITOCHONDRIAL DNA;

ARTICLE; CONTROLLED STUDY; DATA BASE; GENE SEQUENCE; GENETIC POLYMORPHISM; GENETIC VARIABILITY; HAPLOTYPE; HUMAN; HUNGARY; NUCLEOTIDE SEQUENCE; POPULATION GENETICS; POPULATION STRUCTURE; PRIORITY JOURNAL;

DATABASES, FACTUAL; DNA, MITOCHONDRIAL; GENETICS, POPULATION; HAPLOTYPES; HUMANS; HUNGARY; POLYMERASE CHAIN REACTION; SEQUENCE ANALYSIS, DNA; VARIATION (GENETICS);

EID: 34548118309     PISSN: 09379827     EISSN: 14371596     Source Type: Journal    
DOI: 10.1007/s00414-006-0128-4     Document Type: Article

References (43)

1. National Research Council Committee on DNA Technology in Forensic Science (1992) DNA technology in forensic science. National Academy Press, Washington DC
2. Röhl A, Brinkmann B, Forster L, Forster P (2001) An annotated mtDNA database. Int J Legal Med 115:29-39
3. Forster P, Calì F, Röhl A et al (2002) Continental and subcontinental distributions of mtDNA control region types. Int J Legal Med 116:99-108
4. Rex-Kiss B, Szabo L, Szabo S, Hartmann E (1973) ABO, MN, Rh blood groups, Hp types and Hp level, Gm(1) factor investigations on the Gypsy population of Hungary. Hum Biol 45:41-61
5. Kalaydjieva L, Gresham D, Calafell F (2001) Genetic studies of the Roma (Gypsies): a review. BMC Med Genet 2:5
6. Iovita R, Schurr T (2004) Reconstructing the origins and migrations of diasporic populations: the case of the European Gypsies. Am Anthropol 106:267-281
7. Gresham D, Morar B, Underhill PA et al (2001) Origins and divergence of the Roma (gypsies). Am J Hum Genet 69:1314-1331
8. Kalaydjieva L, Calafell F, Jobling M et al (2001) Patterns of inter and intra-group genetic diversity in the Vlax Roma as revealed by Y chromosome and mitochondrial DNA lineages. Eur J Hum Genet 9:97-104
9. Human Rights Watch (1999) Abuses against Serbs and Roma in the new Kosovo. Human Rights Watch Report, vol 11, No 10
10. Egyed B, Füredi S, Angyal M, Boutrand L, Vandenberghe A, Woller J, Pádár Z (2000) Analysis of eight STR loci in two Hungarian populations. Int J Legal Med 113:272-275
11. Füredi S, Angyal M, Kozma Z, Sétáló J, Woller J, Pádár Z (1997) Semi-automatic DNA profiling in a Hungarian Romany population using the STR loci HumVWFA31, HumTH01, HumTPOX, and HumCSF1PO. Int J Legal Med 110:184-187
12. Egyed B, Füredi S, Angyal M, Balogh I, Kalmar L, Pádár Z (2005) Analysis of the population heterogeneity in Hungary using fifteen forensically informative STR markers. Forensic Sci Int 158:244-249
13. Brandstätter A, Peterson CT, Irwin JA, Mpoke S, Koech DK, Parson W, Parsons TJ (2004) Mitochondrial DNA control region sequences from Nairobi (Kenya): inferring phylogenetic parameters for the establishment of a forensic database. Int J Legal Med 118(5):294-306
14. Andrews RM, Kubacka I, Chinnery PF, Lightowlers RN, Turnbull DM, Howell N (1999) Reanalysis and revision of the Cambridge reference sequence for human mitochondrial DNA. Nat Genet 23:147
15. Anderson S, Bankier AT, Barrell BG et al (1981) Sequence and organization of the human mitochondrial genome. Nature 290:457-465
16. Nei M (1987) Molecular evolutionary Genetics. Columbia University Press, New York
17. Excoffier L, Smouse P, Quattro J (1992) Analysis of molecular variance inferred from metric distances among DNA haplotypes: application to human mitochondrial DNA restriction data. Genetics 131:479-491
18. Achilli A, Rengo C, Magri C, Battaglia V et al (2004) The molecular dissection of mtDNA haplogroup H confirms that the Franco-Cantabrian glacial refuge was a major source for the European gene pool Am J Hum Genet 75:910-918
19. Achilli A, Rengo C, Battaglia V et al (2005) Saami and Berbers-an unexpected mitochondrial DNA link. Am J Hum Genet 76:883-886
20. Allard MW, Miller K, Wilson M, Monson K, Budowle B (2002) Characterization of the Caucasian haplogroups present in the SWGDAM forensic mtDNA dataset for 1771 human control region sequences. J Forensic Sci 47:1215-1223
21. Bandelt HJ, Alves-Silva J, Guimaraes PE et al (2001) Phylogeography of the human mitochondrial haplogroup L3e: a snapshot of African prehistory and Atlantic slave trade. Ann Hum Genet 65:549-563
22. Brehm A, Pereira L, Bandelt HJ, Prata MJ, Amorim A (2002) Mitochondrial portrait of the Cabo Verde archipelago: the Senegambian outpost of Atlantic slave trade. Ann Hum Genet 66:49-60
23. Finnilä S, Lehtonen MS, Majamaa K (2001) Phylogenetic network for European DNA. Am J Hum Genet 68:1315-1320
24. Lutz S, Weisser HJ, Heizmann J, Pollak S (1998) Location and frequency of polymorphic positions in the mtDNA control region of individuals from Germany. Int J Legal Med 111:67-77
25. Mishmar D, Ruiz-Pesini E, Golik P et al (2003) Natural selection shaped regional mtDNA variation in humans. Proc Natl Acad Sci USA 100:171-176
26. Palanichamy MG, Sun C, Agrawal S et al (2004) Phylogeny of mitochondrial DNA macrohaplogroup N in India, based on complete sequencing: implications for the peopling of South Asia. Am J Hum Genet 75:966-978
27. Quintana-Murci L, Semino O, Bandelt HJ, Passarino G, McElreavey K, Santachiara-Benerecetti AS (1999) Genetic evidence of an early exit of Homo sapiens sapiens from Africa through eastern Africa. Nat Genet 23:437-441
28. Reidla M, Kivisild T, Metspalu E et al (2003) Origin and diffusion of mtDNA haplogroup X. Am J Hum Genet 73:1178-1190
29. Richards M, Macaulay V, Hickey E et al (2000)Tracing European founder lineages in the Near Eastern mtDNA pool. Am J Hum Genet 67:1251-1276, Nov
30. Salas A, Richards M, De la Fe T et al (2002) The making of the African mtDNA landscape. Am J Hum Genet 71:1082-1111
31. Torroni A, Rengo C, Guida V et al (2001) Do the four clades of the mtDNA haplogroup L2 evolve at different rates? Am J Hum Genet 69:1348-1356
32. Watson E, Forster P, Richards M, Bandelt HJ (1997) Mitochondrial footprints of human expansions in Africa. Am J Hum Genet 61:691-704
33. Wilson FH, Hariri A, Farhi A et al (2004) A cluster of metabolic defects caused by mutation in a mitochondrial tRNA. Science 306:1190-1194
34. Rogers AR, Harpending HC (1992) Population growth makes waves in the distribution of pairwise genetic differences. Mol Biol Evol 9:552-569
35. Loogväli EL, Roostalu U, Malyarchuk BA et al (2004) Disuniting uniformity: a pied cladistic canvas of mtDNA haplogroup H in Eurasia. Mol Biol Evol 21:2012-2021
36. Monson KL, Miller KWP, Wilson MR, DiZinno JA, Budowle B (2003) The mtDNA population database: an integrated software and database resource for forensic comparison. Forensic Science Communications Online. Available at http://www.fbi.gov/hq/lab/fsc/backissu/april2002/miller1.htm
37. Miller KW, Budowle B (2001) A compendium of human mitochondrial DNA control region: development of an international standard forensic database. Croat Med J 42:315-327
38. Chaix R, Austerlitz F, Morar B, Kalaydjieva L, Heyer E (2004) Vlax Roma history: what do coalescent-based methods tell us? Eur J Hum Genet 12:285-292
39. Melton T (2004) Mitochondrial DNA heteroplasmy. Forensic Sci Rev 16:1-20
40. Lutz S, Wittig H, Weissner HJ et al (2000) Is it possible to differentiate mtDNA by means of HVIII in samples that cannot be distinguished by sequencing the HVI and HVII regions? Forensic Sci Int 113:97-101
41. Bini C, Ceccardi S, Luiselli D, Ferri G, Pelotti S, Colalongo C, Falconi M, Pappalardo G (2003) Different informativeness of the three hypervariable mitochondrial DNA regions in the population of Bologna (Italy). Forensic Sci Int 135:48-52
42. Butler JM (2005) Forensic DNA typing: biology, technology, and genetics of STR markers, 2nd edn. Elsevier, New York
43. Chung U, Lee HY, Yoo J, Park MJ, Shin K (2005) Mitochondrial DNA CA dinucleotide repeats in Koreans: the presence of length heteroplasmy. Int J Legal Med 119:50-53