Microsatellite and cpDNA variation in island and mainland populations of a regionally rare eucalypt, Eucalyptus perriniana (Myrtaceae)

Australian Journal of Botany

Volumn 55, Issue 5, 2007, Pages 513-520

  Rathbone, Damien A ^a   McKinnon, Gay E ^a   Potts, Brad M ^a   Steane, Dorothy A ^a   Vaillancourt, René E ^a  

^a UNIVERSITY OF TASMANIA   (Australia)

Author keywords

[No Author keywords available]

Indexed keywords

CHLOROPLAST; DIVERGENCE; DNA; EVERGREEN TREE; GENETIC MARKER; GENETIC VARIATION; POPULATION DISTRIBUTION; POPULATION SIZE; RARE SPECIES; SPECIES CONSERVATION;

AUSTRALASIA; AUSTRALIA; TASMANIA;

EUCALYPTUS; EUCALYPTUS PERRINIANA; MYRTACEAE;

EID: 34547936730     PISSN: 00671924     EISSN: None     Source Type: Journal    
DOI: 10.1071/BT06203     Document Type: Article

References (55)

1. Barton NH, Hewitt GM (1989) Adaptation, speciation and hybrid zones. Nature 341, 497-503. doi: 10.1038/341497a0
2. Brondani RPV, Brondani C, Tarchini R, Grattapaglia D (1998) Development, characterisation and mapping of microsatellite markers in Eucalyptus grandis and E. urophylla. Theoretical and Applied Genetics 97, 816-827. doi: 10.1007/s001220050961
3. Brooker MIH (2000) A new classification of the genus Eucalyptus L'Hér. (Myrtaceae). Australian Systematic Botany 13, 79-148. doi: 10.1071/SB98008
4. Brooker MIH, Kleinig DA (1999) 'Field guide to eucalypts. Vol. 1. Southeastern Australia.' 2nd edn. (Bloomings Books: Melbourne)
5. Butcher PA, Skinner AK, Gardiner CA (2005) Increased inbreeding and inter-species gene flow in remnant populations of the rare Eucalyptus benthamii. Conservation Genetics 6, 213-226. doi: 10.1007/s10592-004-7830-x
6. Byrne M, Macdonald B (2000) Phylogeography and conservation of three oil mallee taxa, Eucalyptus kochii ssp. kochii, ssp. plenissima and E. horistes. Australian Journal of Botany 48, 305-312. doi: 10.1071/BT99017
7. Byrne M, Marquez-Garcia MI, Uren T, Smith DS, Moran GF (1996) Conservation and genetic diversity of microsatellite loci in the genus Eucalyptus. Australian Journal of Botany 44, 331-341. doi: 10.1071/BT9960331
8. Chippendale GM (1988) 'Flora of Australia, Vol. 19, Myrtaceae- Eucalyptus, Angophora.' (Australian Government Publishing Service: Canberra)
9. Chippendale GM, Wolf L (1981) The natural distribution of Eucalyptus in Australia. Australian National Parks and Wildlife Service, Special Publication No. 6, Canberra.
10. Clement M, Posada D, Crandall KA (2000) TCS: a computer program to estimate gene genealogies. Molecular Ecology 9, 1657-1659. doi: 10.1046/j.1365-294x.2000.01020.x
11. Coates DJ, Sokolowski RE (1989) Geographic patterns of genetic diversity in Karri (Eucalyptus diversicolor F.Muell.). Australian Journal of Botany 37, 145-156. doi: 10.1071/BT9890145
12. Doyle JJ, Doyle JL (1990) Isolation of plant DNA from fresh tissue. Focus 12, 13-15.
13. Dutech C, Maggia L, Joly HI (2000) Chloroplast diversity in Vouacapoua americana (Caesalpiniaceae), a neotropical forest tree. Molecular Ecology 9, 1427-1432. doi: 10.1046/j.1365-294x.2000.01027.x
14. Foreman DB, Walsh NG (1993) 'Flora of Victoria.' (Inkata Press: Melbourne)
15. Frankel OH, Soulé ME (1981) 'Conservation and evolution.' (Cambridge University Press: Cambridge, UK)
16. Freeman J, Jackson HD, Steane DA, McKinnon GE, Dutkowski GW, Potts BM, Vaillancourt RE (2001) Chloroplast DNA phylogeography of Eucalyptus globulus. Australian Journal of Botany 49, 585-596. doi: 10.1071/BT00094
17. Hall N, Brooker MIH (1973). 'Spinning Gum Eucalyptus perriniana F.Muell. ex Rodway. Forest Tree Series no. 67.' (Australian Government Publishing Service: Canberra)
18. Harwood CE, Moran GF, Bell JC (1997) Genetic differentiation in natural populations of Grevillea robusta. Australian Journal of Botany 45, 669-678. doi: 10.1071/BT96073
19. Hedrick PW (1999) Perspective: highly variable loci and their interpretation in evolution and conservation. Evolution 53, 313-318. doi: 10.2307/2640768
20. Holman JE, Hughes JM, Fensham RJ (2003) A morphological cline in Eucalyptus: a genetic perspective. Molecular Ecology 12, 3013-3025. doi: 10.1046/j.1365-294X.2003.01970.x
21. Hopper SD, Gioia P (2004) The southwest Australian floristic region: evolution and conservation of a global hot spot of biodiversity. Annual Review of Ecology, Evolution, and Systematics 35, 623-650. doi: 10.1146/annurev.ecolsys.35.112202.130201
22. Jackson WD (1965) The vegetation. In 'Atlas of Tasmania'. (Ed. JL Davies) pp. 30-55. (Tasmanian Government Printer: Hobart)
23. Jones RC, Steane DA, Potts BM, Vaillancourt RE (2002) Microsatellite and morphological analysis of Eucalyptus globulus populations. Canadian Journal of Forest Research 32, 59-66. doi: 10.1139/x01-172
24. Jones RC, McKinnon GE, Potts BM, Vaillancourt RE (2005) Genetic diversity and mating system of an endangered tree Eucalyptus morrisbyi. Australian Journal of Botany 53, 367-377. doi: 10.1071/BT04182
25. Jones TH, Vaillancourt RE, Potts BM (2007) Detection and visualization of spatial genetic structure in continuous Eucalyptus globulus forest. Molecular Ecology 16, 697-707.
26. Kennington WJ, James SH (1997) Contrasting patterns of clonality in two closely related mallee species from Western Australia, Eucalyptus argutifolia and E. obtusiflora (Myrtaceae). Australian Journal of Botany 45, 679-689. doi: 10.1071/BT96082
27. Kirkpatrick JB, Fowler M (1998) Locating likely glacial forest refugia in Tasmania using palynological and ecological information to test alternative climatic models. Biological Conservation 85, 171-182. doi: 10.1016/S0006-3207(97)00144-4
28. Lande R (1995) Mutation and conservation. Conservation Biology 9, 782-791. doi: 10.1046/j.1523-1739.1995.09040782.x
29. Lande R, Barrowcloug GF (1987) Effective population size, genetic variation, and their use in population management. In 'Viable populations for conservation'. (Ed. ME Soulé) pp. 87-123. (Cambridge University Press: Cambridge, UK)
30. Levin DA, Francisco-Ortega J, Jansen RK (1996) Hybridization and the extinction of rare plant species. Conservation Biology 10, 10-16. doi: 10.1046/j.1523-1739.1996.10010010.x
31. Lewis PO, Zaykin D (2001) 'Genetic data analysis: computer program for the analysis of allelic data version 1.0 (d16c).' Free program distributed by the authors.
32. McGowen MH, Wiltshire RJE, Potts BM, Vaillancourt RE (2001) The origin of Eucalyptus vernicosa, a unique shrub eucalypt. Biological Journal of the Linnean Society 74, 397-405.
33. McKinnon GE, Vaillancourt RE, Jackson HD, Potts BM (2001) Chloroplast sharing in the Tasmanian eucalypts. Evolution 55, 703-711. doi: 10.1554/0014-3820(2001)055[0703:CSITTE]2.0.CO;2
34. McKinnon GE, Jordan GJ, Vaillancourt RE, Steane DA, Potts BM (2004a) Glacial refugia and reticulate evolution: the case of the Tasmanian eucalypts. Philosophical Transactions of the Royal Society of London. Series B, Biological Sciences 359, 275-284. doi: 10.1098/rstb.2003.1391
35. McKinnon GE, Vaillancourt RE, Steane DA, Potts BM (2004b) The rare silver gum, Eucalyptus cordata, is leaving its trace in the organellar gene pool of Eucalyptus globulus. Molecular Ecology 13, 3751-3762. doi: 10.1111/j.1365-294X.2004.02364.x
36. Moran GF, Hopper SD (1987) Conservation of the genetic resources of rare and widespread eucalypts in remnant vegetation. In 'Nature conservation: the role of remnants of native vegetation'. (Eds DA Saunders, GW Arnold, AA Burbidge, AJM Hopkins) pp. 151-162. (Surrey Beatty: Sydney)
37. Nei M (1972) Genetic distance between populations. The American Naturalist 106, 283-292.
38. Parker PG, Snow AA, Schug MD, Booton GC, Fuerst PA (1998) What molecules can tell us about populations; choosing and using a molecular marker. Ecology 79, 361-382. doi: 10.2307/176939
39. Peakall R, Smouse PE (2001) 'GenAlEx V5: genetic analysis in Excel.' Population genetic software for teaching and research. Australian National University, Canberra, Australia. Available from http://www.anu.edu.au/BoZo/ GenAlEx/.
40. Petit RJ, Pineau E, Demesure B, Bacilieri R, Ducousso A, Kremer A (1997) Chloroplast DNA footprints of postglacial recolonisation by oaks. Proceedings of the National Academy of Sciences of the United States of America 94, 9996-10001. doi: 10.1073/pnas.94.18.9996
41. Potts BM, Savva M (1988) Self-incompatibility in Eucalyptus. In 'Pollination '88'. Melbourne. (Eds RB Knox, MB Sing, LF Troiani) pp. 165-170. (Plant Cell Biology Research Centre, University of Melbourne: Melbourne)
42. Potts BM, Wiltshire RJE (1997) Eucalypt genetics and genecology. In 'Eucalypt ecology: individuals to ecosystems'. (Eds J Williams, J Woinarski) pp. 56-91. (Cambridge University Press: Cambridge, UK).
43. Rhymer JM, Simberloff D (1996) Extinction by hybridization and introgression. Annual Review of Ecology and Systematics 27, 83-109. doi: 10.1146/annurev.ecolsys.27.1.83
44. Rodway L (1893) Description of Eucalyptus perriniana F.Muell. ex Rodway. Papers and Proceedings of the Royal Society of Tasmania 1893, 179-187.
45. Rossetto M, Jezierski G, Hopper SD, Dixon KW (1999) Conservation genetics and clonality in two critically endangered eucalypts from the highly endemic south-western Australian flora. Biological Conservation 88, 321-331. doi: 10.1016/S0006-3207(98)00119-0
46. Sampson JF, Hopper SD, James SH (1988) Genetic diversity and the conservation of Eucalyptus crucis Maiden. Australian Journal of Botany 36, 447-460. doi: 10.1071/BT9880447
47. Sampson JF, Hopper SD, James SH (1989) The mating system and population genetic structure in a bird-pollinated mallee, Eucalyptus rhodantha. Heredity 63, 383-393.
48. Sampson JF, Hopper SD, James SH (1995) The mating system and genetic diversity of the Australian arid zone mallee, Eucalyptus rameliana. Australian Journal of Botany 43, 461-474. doi: 10.1071/BT9950461
49. Smith S, Hughes J, Wardell-Johnson G (2003) High population differentiation and extensive clonality in a rare mallee eucalypt Eucalyptus curtisii-conservation genetics of a rare mallee eucalypt. Conservation Genetics 4, 289-300. doi: 10.1023/A:1024077315820
50. Steane DA, Vaillancourt RE, Russell J, Powell W, Marshall D, Potts BM (2001) Development and characterisation of microsatellite loci in Eucalyptus globulus (Myrtaceae). Silvae Genetica 50, 89-91.
51. Swofford DL (1991) 'PAUP: phylogenetic analysis using parsimony, version 3.1.1.' (Illinois Natural History Survey: Champaign)
52. Tyson M, Vaillancourt RE, Reid JB (1998) Determination of clone size and age in a mallee eucalypt using RAPDs. Australian Journal of Botany 46, 161-172. doi: 10.1071/BT97003
53. Vaillancourt RE, Jackson HD (2000) A chloroplast DNA hypervariable region in eucalypts. Theoretical and Applied Genetics 101, 473-477. doi: 10.1007/s001220051505
54. Williams KJ, Potts BM (1996) The natural distribution of Eucalyptus species in Tasmania. Tasforests 8, 39-164.
55. Wiltshire RJE, Reid JB (1987) Genetic variation in the Spinning Gum, Eucalyptus perriniana F.Muell. ex Rodway. Australian Journal of Botany 35, 33-47. doi: 10.1071/BT9870033