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Volumn 23, Issue 13, 2007, Pages 1692-1693

SNP detection exploiting multiple sources of redundancy in large EST collections improves validation rates

Author keywords

[No Author keywords available]

Indexed keywords

ATLANTIC SALMON; CONFERENCE PAPER; CONTROLLED STUDY; EXPRESSED SEQUENCE TAG; GENE SEQUENCE; GENOTYPE; NONHUMAN; NUCLEOTIDE SEQUENCE; PRIORITY JOURNAL; SINGLE NUCLEOTIDE POLYMORPHISM; SWINE; UNINDEXED SEQUENCE; VALIDATION PROCESS;

EID: 34547844090     PISSN: 13674803     EISSN: 13674811     Source Type: Journal    
DOI: 10.1093/bioinformatics/btm154     Document Type: Conference Paper
Times cited : (26)

References (11)
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    • Buetow, K.H.1
  • 2
    • 0031955518 scopus 로고    scopus 로고
    • Base-calling of automated sequencer traces using phred. I. Accuracy assessment
    • Ewing, B. et al. (1998) Base-calling of automated sequencer traces using phred. I. Accuracy assessment. Genome Res., 8, 175-185.
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    • Ewing, B.1
  • 3
    • 0031955116 scopus 로고    scopus 로고
    • Consed: A graphical tool for sequence finishing
    • Gordon, D. et al. (1998) Consed: A graphical tool for sequence finishing. Genome Res., 8, 195-202.
    • (1998) Genome Res , vol.8 , pp. 195-202
    • Gordon, D.1
  • 4
    • 3543078755 scopus 로고    scopus 로고
    • Single nucleotide polymorphisms associated with rat expressed sequences
    • Guryev, V. et al. (2004) Single nucleotide polymorphisms associated with rat expressed sequences. Genome Res., 14, 1438-1443.
    • (2004) Genome Res , vol.14 , pp. 1438-1443
    • Guryev, V.1
  • 5
    • 10944236102 scopus 로고    scopus 로고
    • An interactive bovine in silico SNP database (IBISS)
    • Hawken, R.J. et al. (2004) An interactive bovine in silico SNP database (IBISS). Mamm. Genome., 819-827.
    • (2004) Mamm. Genome , pp. 819-827
    • Hawken, R.J.1
  • 6
    • 0033779878 scopus 로고    scopus 로고
    • Genome-wide analysis of single-nucleotide polymorphisms in human expressed sequences
    • Irizarry, K. et al. (2000) Genome-wide analysis of single-nucleotide polymorphisms in human expressed sequences. Nat. Genet., 26, 233-236.
    • (2000) Nat. Genet , vol.26 , pp. 233-236
    • Irizarry, K.1
  • 8
    • 33845642217 scopus 로고    scopus 로고
    • Establishment of a pipeline to analyse non-synonymous SNPs in Bos Taurus
    • Lee, M.A. et al. (2006) Establishment of a pipeline to analyse non-synonymous SNPs in Bos Taurus. BMC Genomics, 26, 298.
    • (2006) BMC Genomics , vol.26 , pp. 298
    • Lee, M.A.1
  • 9
    • 0032706623 scopus 로고    scopus 로고
    • A general approach to single-nucleotide polymorphism discovery
    • Marth, G.T. et al. (1999) A general approach to single-nucleotide polymorphism discovery. Nat. Genet., 23, 452-456.
    • (1999) Nat. Genet , vol.23 , pp. 452-456
    • Marth, G.T.1
  • 10
    • 12144288565 scopus 로고    scopus 로고
    • Development and application of a salmonoid EST database and cDNA microarray: Data mining and interspecific hybridization characteristics
    • Rise, M.L. et al. (2004) Development and application of a salmonoid EST database and cDNA microarray: Data mining and interspecific hybridization characteristics. Genome Res., 14 478-490.
    • (2004) Genome Res , vol.14 , pp. 478-490
    • Rise, M.L.1
  • 11
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    • Overlapping genomic sequences: A treasure trove of single-nucleotide polymorphisms
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    • Taillon-Miller, P.1


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