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Volumn 361, Issue 3, 2007, Pages 634-640

Identification of critical residues in nervous necrosis virus B2 for dsRNA-binding and RNAi-inhibiting activity through by bioinformatic analysis and mutagenesis

Author keywords

B2 protein; Betanodavirus; Orange spotted grouper

Indexed keywords

AMINO ACID; ARGININE; B2 PROTEIN; DOUBLE STRANDED RNA; GLUTAMINE; MUTANT PROTEIN; NONSTRUCTURAL PROTEIN 3; UNCLASSIFIED DRUG; VIRUS PROTEIN;

EID: 34547828851     PISSN: 0006291X     EISSN: 10902104     Source Type: Journal    
DOI: 10.1016/j.bbrc.2007.07.075     Document Type: Article
Times cited : (21)

References (24)
  • 1
    • 0030877509 scopus 로고    scopus 로고
    • Nodavirus as pathogens in larval and juvenile marine finfish
    • Munday B.L., and Nakai T. Nodavirus as pathogens in larval and juvenile marine finfish. World J. Microbiol. Biotechnol. 13 (1997) 375-381
    • (1997) World J. Microbiol. Biotechnol. , vol.13 , pp. 375-381
    • Munday, B.L.1    Nakai, T.2
  • 2
    • 0035054049 scopus 로고    scopus 로고
    • Phylogenetic and antigenic characterization of new fish nodavirus isolates from European and Asia
    • Skliris G.P., Krondiris J.V., Sideris D.C., Shinn A.P., Starkey W.G., and Richards R.H. Phylogenetic and antigenic characterization of new fish nodavirus isolates from European and Asia. Virus Res. 75 (2001) 59-67
    • (2001) Virus Res. , vol.75 , pp. 59-67
    • Skliris, G.P.1    Krondiris, J.V.2    Sideris, D.C.3    Shinn, A.P.4    Starkey, W.G.5    Richards, R.H.6
  • 3
    • 0026518969 scopus 로고
    • Properties of a new virus belonging to Nodavirus found in larval striped jack (Pseudocaranx dentex) with nervous necrosis
    • Mori K., Nakai T., Arimoto M., Mushiake K., and Furusawa I. Properties of a new virus belonging to Nodavirus found in larval striped jack (Pseudocaranx dentex) with nervous necrosis. Virology 187 (1992) 368-371
    • (1992) Virology , vol.187 , pp. 368-371
    • Mori, K.1    Nakai, T.2    Arimoto, M.3    Mushiake, K.4    Furusawa, I.5
  • 4
    • 0034777601 scopus 로고    scopus 로고
    • Establishment of an infectious RNA transcription system for Striped jack nervous necrosis virus, the type species of the betanodavirus
    • Iwamoto T., Mise K., Mori K., Arimoto M., Nakai T., and Okuno T. Establishment of an infectious RNA transcription system for Striped jack nervous necrosis virus, the type species of the betanodavirus. J. Gen. Virol. 82 (2001) 2653-2662
    • (2001) J. Gen. Virol. , vol.82 , pp. 2653-2662
    • Iwamoto, T.1    Mise, K.2    Mori, K.3    Arimoto, M.4    Nakai, T.5    Okuno, T.6
  • 5
    • 26244463770 scopus 로고    scopus 로고
    • Characterization of Striped jack nervous necrosis virus subgenomic RNA3 and biological activities of its encoded protein B2
    • Iwamoto T., Mise K., Takeda A., Okinaka Y., Mori K.I., Arimoto M., Okuno T., and Nakai T. Characterization of Striped jack nervous necrosis virus subgenomic RNA3 and biological activities of its encoded protein B2. J. Gen. Virol. 86 (2005) 2807-2816
    • (2005) J. Gen. Virol. , vol.86 , pp. 2807-2816
    • Iwamoto, T.1    Mise, K.2    Takeda, A.3    Okinaka, Y.4    Mori, K.I.5    Arimoto, M.6    Okuno, T.7    Nakai, T.8
  • 6
    • 23944506789 scopus 로고    scopus 로고
    • Animal virus replication and RNAi-mediated antiviral silencing in Caenorhabditis elegans
    • Lu R., Maduro M., Li F., Li H.W., Broitman-Maduro G., Li W.X., and Ding S.W. Animal virus replication and RNAi-mediated antiviral silencing in Caenorhabditis elegans. Nature 436 (2005) 1040-1043
    • (2005) Nature , vol.436 , pp. 1040-1043
    • Lu, R.1    Maduro, M.2    Li, F.3    Li, H.W.4    Broitman-Maduro, G.5    Li, W.X.6    Ding, S.W.7
  • 7
    • 19944420154 scopus 로고    scopus 로고
    • A virus-encoded inhibitor that blocks RNA interference in mammalian cells
    • Sullivan C.S., and Ganem D. A virus-encoded inhibitor that blocks RNA interference in mammalian cells. J. Virol. 79 (2005) 7371-7379
    • (2005) J. Virol. , vol.79 , pp. 7371-7379
    • Sullivan, C.S.1    Ganem, D.2
  • 8
    • 14344252157 scopus 로고    scopus 로고
    • Induction and suppression of RNA silencing: insight from viral infections
    • Voinnet O. Induction and suppression of RNA silencing: insight from viral infections. Nat. Rev. Genet 6 (2005) 206-220
    • (2005) Nat. Rev. Genet , vol.6 , pp. 206-220
    • Voinnet, O.1
  • 9
    • 0037123630 scopus 로고    scopus 로고
    • Induction and suppression of RNA silencing by an animal virus
    • Li H., Li W.X., and Ding S.W. Induction and suppression of RNA silencing by an animal virus. Science 296 (2002) 1319-1321
    • (2002) Science , vol.296 , pp. 1319-1321
    • Li, H.1    Li, W.X.2    Ding, S.W.3
  • 10
    • 3042571898 scopus 로고    scopus 로고
    • Complete sequence of RNA1 and subgenomic RNA3 of Atlantic halibut nodavirus (AHNV)
    • Sommerset I., and Nerland A.H. Complete sequence of RNA1 and subgenomic RNA3 of Atlantic halibut nodavirus (AHNV). Dis. Aquat. Organ 10 (2004) 117-125
    • (2004) Dis. Aquat. Organ , vol.10 , pp. 117-125
    • Sommerset, I.1    Nerland, A.H.2
  • 11
    • 33646003869 scopus 로고    scopus 로고
    • Betanodavirus B2 is an RNA interference antagonist that facilitates intracellular viral RNA accumulation
    • Fenner B.J., Thiagarajan R., Chua H.K., and Kwang J. Betanodavirus B2 is an RNA interference antagonist that facilitates intracellular viral RNA accumulation. J. Virol. 80 (2006) 85-94
    • (2006) J. Virol. , vol.80 , pp. 85-94
    • Fenner, B.J.1    Thiagarajan, R.2    Chua, H.K.3    Kwang, J.4
  • 12
    • 33745782055 scopus 로고    scopus 로고
    • Sequestration and protection of double-stranded RNA by the betanodavirus B2 protein
    • Fenner B.J., Goh W., and Kwang J. Sequestration and protection of double-stranded RNA by the betanodavirus B2 protein. J. Virol. 80 (2006) 6822-6833
    • (2006) J. Virol. , vol.80 , pp. 6822-6833
    • Fenner, B.J.1    Goh, W.2    Kwang, J.3
  • 14
    • 28544452860 scopus 로고    scopus 로고
    • The structure of the flock house virus B2 protein, a viral suppressor of RNA interference, shows a novel mode of double-strand RNA recognition
    • Lingel A., Simon B., Izaurralde E., and Sattler M. The structure of the flock house virus B2 protein, a viral suppressor of RNA interference, shows a novel mode of double-strand RNA recognition. EMBO Rep. 6 (2005) 1149-1155
    • (2005) EMBO Rep. , vol.6 , pp. 1149-1155
    • Lingel, A.1    Simon, B.2    Izaurralde, E.3    Sattler, M.4
  • 15
    • 22144480674 scopus 로고    scopus 로고
    • Cloning of a orange-spotted grouper (Epinephelus coioides) Mx cDNA and characterisation of its expression in response to nodavirus
    • Chen Y.M., Su Y.L., Lin J.H.Y., Yang H.L., and Chen T.Y. Cloning of a orange-spotted grouper (Epinephelus coioides) Mx cDNA and characterisation of its expression in response to nodavirus. Fish Shellfish Immunol. 20 (2006) 58-71
    • (2006) Fish Shellfish Immunol. , vol.20 , pp. 58-71
    • Chen, Y.M.1    Su, Y.L.2    Lin, J.H.Y.3    Yang, H.L.4    Chen, T.Y.5
  • 16
    • 0043222570 scopus 로고    scopus 로고
    • Fully automated ab initio protein structure prediction using I-SITES, HMMSTR and ROSETTA
    • Bystroff C., and Shao Y. Fully automated ab initio protein structure prediction using I-SITES, HMMSTR and ROSETTA. Bioinformatics 18 (2002) S54-S61
    • (2002) Bioinformatics , vol.18
    • Bystroff, C.1    Shao, Y.2
  • 17
    • 0029881007 scopus 로고    scopus 로고
    • MOLMOL: a program for display and analysis of macromolecular structures
    • Koradi R., Billeter M., and Wüthrich K. MOLMOL: a program for display and analysis of macromolecular structures. J. Mol. Graph. 14 (1996) 51-55
    • (1996) J. Mol. Graph. , vol.14 , pp. 51-55
    • Koradi, R.1    Billeter, M.2    Wüthrich, K.3
  • 18
    • 0346373715 scopus 로고    scopus 로고
    • Identification of host-specificity determinants in betanodaviruses by using reassortants between striped jack nervous necrosis virus and sevenband grouper nervous necrosis virus
    • Iwamoto T., Okinaka Y., Mise K., Mori K.I., Arimoto M., Okuno T., and Nakai T. Identification of host-specificity determinants in betanodaviruses by using reassortants between striped jack nervous necrosis virus and sevenband grouper nervous necrosis virus. J. Virol. 78 (2004) 1256-1262
    • (2004) J. Virol. , vol.78 , pp. 1256-1262
    • Iwamoto, T.1    Okinaka, Y.2    Mise, K.3    Mori, K.I.4    Arimoto, M.5    Okuno, T.6    Nakai, T.7
  • 19
    • 34249829630 scopus 로고    scopus 로고
    • Dissection of double-stranded RNA binding protein B2 from betanodavirus
    • Fenner B.J., Goh W., and Kwang J. Dissection of double-stranded RNA binding protein B2 from betanodavirus. J. Virol. 81 (2007) 5449-5459
    • (2007) J. Virol. , vol.81 , pp. 5449-5459
    • Fenner, B.J.1    Goh, W.2    Kwang, J.3
  • 21
    • 0034650510 scopus 로고    scopus 로고
    • Double-stranded RNA injection produces null phenotypes in zebrafish
    • Li Y.X., Farrell M.J., Liu R., Mohanty N., and Kirby M.L. Double-stranded RNA injection produces null phenotypes in zebrafish. Dev. Biol. 217 (2000) 394-405
    • (2000) Dev. Biol. , vol.217 , pp. 394-405
    • Li, Y.X.1    Farrell, M.J.2    Liu, R.3    Mohanty, N.4    Kirby, M.L.5
  • 22
    • 0033575910 scopus 로고    scopus 로고
    • Double-stranded RNA induces specific development defects in zebrafish embryos
    • Wargelius A., Ellingsen S., and Fjose A. Double-stranded RNA induces specific development defects in zebrafish embryos. Biochem. Biophys. Res. Commun. 263 (1999) 156-161
    • (1999) Biochem. Biophys. Res. Commun. , vol.263 , pp. 156-161
    • Wargelius, A.1    Ellingsen, S.2    Fjose, A.3
  • 23
    • 0035115582 scopus 로고    scopus 로고
    • Determination of the complete nucleotide sequences of RNA1 and RNA2 from greasy grouper (Epinephelus tauvina) nervous necrosis virus, Singapore strain
    • Tan C., Huang B., Chang S.F., Ngoh G.H., Munday B., Chen S.C., and Kwang J. Determination of the complete nucleotide sequences of RNA1 and RNA2 from greasy grouper (Epinephelus tauvina) nervous necrosis virus, Singapore strain. J. Gen. Virol. 82 (2001) 647-653
    • (2001) J. Gen. Virol. , vol.82 , pp. 647-653
    • Tan, C.1    Huang, B.2    Chang, S.F.3    Ngoh, G.H.4    Munday, B.5    Chen, S.C.6    Kwang, J.7
  • 24
    • 0037455586 scopus 로고    scopus 로고
    • Recovery of infectivity from cDNA clones of Nodamura Virus and identification of small nonstructural proteins
    • Johnson K.L., Price B.D., and Ball L.A. Recovery of infectivity from cDNA clones of Nodamura Virus and identification of small nonstructural proteins. Virology 305 (2003) 436-451
    • (2003) Virology , vol.305 , pp. 436-451
    • Johnson, K.L.1    Price, B.D.2    Ball, L.A.3


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