Spatiotemporal independent component analysis for the detection of functional responses in cat retinal images

IEEE Transactions on Medical Imaging

Volumn 26, Issue 8, 2007, Pages 1035-1045

  Barriga, Eduardo S ^a,b,c   Pattichis, Marios ^a,b   Ts'o, Dan ^d   Abramoff, Michael ^a,e   Kardon, Randy ^e   Kwon, Young ^e   Soliz, Peter ^a,f  

^a IEEE   (United States)

^b MSC01 1070   (United States)

^c ORION International Technologies Inc   (United States)

^d State University of New York Upstate Medical University: College of Medicine   (United States)

^e UNIVERSITY OF IOWA   (United States)

^f VisionQuest Biomedical   (United States)

Author keywords

Functional imaging; Independent component analysis (ICA); Retina; Visual stimulation

Indexed keywords

FUNCTIONAL IMAGING; STANDARD METHODS; VISUAL STIMULATION;

IMAGE ANALYSIS; IMAGING SYSTEMS; INDEPENDENT COMPONENT ANALYSIS; MAMMALS; SPURIOUS SIGNAL NOISE;

LIVING SYSTEMS STUDIES;

ANIMAL; ARTICLE; CAT; COMPUTER ASSISTED DIAGNOSIS; EQUIPMENT; EQUIPMENT DESIGN; EVOKED VISUAL RESPONSE; HISTOLOGY; INSTRUMENTATION; METHODOLOGY; OXIMETRY; PHOTOMETRY; PHOTOSTIMULATION; PHYSIOLOGY; PRINCIPAL COMPONENT ANALYSIS; RETINA; RETINOSCOPE; RETINOSCOPY;

ANIMALS; CATS; EQUIPMENT DESIGN; EQUIPMENT FAILURE ANALYSIS; EVOKED POTENTIALS, VISUAL; IMAGE INTERPRETATION, COMPUTER-ASSISTED; OXIMETRY; PHOTIC STIMULATION; PHOTOMETRY; PRINCIPAL COMPONENT ANALYSIS; RETINA; RETINOSCOPES; RETINOSCOPY;

EID: 34547629743     PISSN: 02780062     EISSN: None     Source Type: Journal    
DOI: 10.1109/TMI.2007.897366     Document Type: Article

References (37)

1. H. A. Quigley, G. R. Dunkelberger, and W. R. Green, "Retinal ganglion cell atrophy correlated with automated perimetry in human eyes with glaucoma," Am. J. Ophthalmol.,vol. 107, pp. 453-464, 1989.
2. D. K. Hill and R. D. Keynes, "Opacity changes in stimulated nerve," J. Physiol., vol. 108, pp. 278-281, 1949.
3. A. Grinvald, E. Lieke, R. D. Frostig, C. D. Gilbert, and T. N. Wiesel, "Functional architecture of cortex revealed by optical imaging of intrinsic signals," Lett. Nature, vol. 324, pp. 361-364, 1986.
4. A. Villringer and B. Chance, "Noninvasive optical spectroscopy and imaging of human brain function," Trends Neurosci., pp. 435-442, 1997.
5. R. Kardon, Y. H. Kwon, P. W. Truitt, S. C. Nemeth, D. Ts'o, and P. Soliz, "Optical imaging device of retinal function," in Proc. SPIE Ophthalmic Technologies XII, 2002, vol. 4611, pp. 230-238.
6. M. D. Abramoff, Y. H. Kwon, D. Ts'o, P. Soliz, B. Zimmerman, J. Pokorny, and R. Kardon, "Visual stimulus induced changes in human near-infrared fundus reflectance," Investigative Ophthalmol. Visual Sci. (IOVS), vol. 47, pp. 715-721, 2006.
7. E. S. Barriga, M. S. Pattichis, D. Y. Ts'o, Y. Kwon, R. Kardon, M. D. Abramoff, and P. Soliz, "Detection of low amplitude, in-vivo intrinsic signals from an optical imager of retinal function," Proc. SPIE Ophthalmic Technologies XVI, vol. 6138, pp. 66-77, 2006.
8. D. Y. Ts'o, H. Li, Y. H. Kwon, P. Truitt, and P. Soliz, "Intrinsic signal optical imaging of retinal responses to patterned stimuli," Investigative Ophthalmol. Visual Sci. (IOVS), vol. 43, 2003.
9. P. J. DeLint, J. M. Berendschot, J. van de Kraats, and D. van Norren, "Slow optical changes in human photoreceptors induced by light," Investigative Ophthalmol. Visual Sci. (IOVS), vol. 41, pp. 282-289, 2000.
10. C. E. Riva, E. Logean, and B. Falsini, "Visually evoked hemodynamical response and assessment of neurovascular coupling in the optic nerve and retina," Progress Retinal Eye Res., vol. 24, pp. 183-215, 2005.
11. C. E. Riva, S. D. Cranstoun, J. E. Grunwald, and B. L. Petrig, "Choroidal blood flow in the foveal region of the human disc," Investigative Ophthalmol. Visual Sci. (IOVS), vol. 35, pp. 4273-4281, 1994.
12. B. Falsini, C. E. Riva, and E. Logean, "Flicker-evoked changes in human optic nerve blood flow: Relationship with, retinal neural activity," Investigative Ophthalmol. Visual Sci. (IOVS), vol. 43, pp. 2309-2316, 2002.
13. R. A. Linsenmeier and L. Padnick-Silver, "Metabolic dependence of photoreceptors on the choroid in the normal and detached retina," Investigative Ophthalmol. Visual Sci. (IOVS), vol. 41, pp. 3117-3123, 2000.
14. I. M. H. van Buggenum, G. L. Van der Heijde, G. J. Tangelder, and J. W. M. Reichert-Thoen, "Ocular oxygen measurement," Br. J. Ophthalmol., vol. 80, pp. 567-573, 1996.
15. K. Bizheva, R. Pflug, B. Hermann, B. Povazay, H. Sattmann, P. Qiu, E. Anger, H. Reitsamer, S. Popov, J. R. Taylor, A. Unterhuber, P. Ahnelt, and W. Drexler, "Optophysiology: Depth-resolved probing of retinal physiology with functional ultrahigh-resolution optical coherence tomography," in Proc. Nat. Acad. Sci. USA, 2006, vol. 103, pp. 5066-5071.
16. S. Ogawa, D. W. Tank, and R. Menon, "Intrinsic signal changes accompanying sensory stimulation: Functional brain mapping with magnetic resonance imaging," Proc. Nat. Acad Sci. USA, vol. 89, pp. 5951-5955, 1992.
17. T. Q. Duong, S.-C. Ngan, K. Ugurbil, and S.-G. Kim., "Functional magnetic resonance imaging of the retina," Investigative Ophthalmol. Visual Sci. (IOVS), vol. 43, pp. 1176-1181, 2002.
18. A. Hyvarinen, J. Karhunen, and E. Oja, Independent Component Analysis. New York: Wiley, 2001.
19. S. Makeig, A. J. Bell, T.-P. Jung, and T. J. Sejnowski, "Independent component analysis of electroencephalographic data," in Advances in Neural Information Processing Systems. Cambridge, MA: MIT Press, 1996, pp. 145-151.
20. T.-P. Jung, C. Humpries, T.-W. Lee, M. J. McKeown, V. Iragui, S. Makeig, and T. J. Sejnowski, "Removing electroencephalographic artifacts by blind source separation," Psychophysiology, vol. 37, pp. 163-178, 2000.
21. S. Choi, A. Cichocki, and S. Amari, "Fetal electrocardiogram, data analysis via flexible independent component analysis," presented at the 4th Asia-Pacific Conf. Med. Bio. Eng. (APCMBE'99), Seoul, Korea, 1999.
22. I. Schiessl, M. Stetter, J. E. W. Mayhew, N. McLoughlin, J. S. Lund, and K. Obermayer, "Blind signal separation from, optical imaging recordings with extended spatial decorrelation," IEEE Trans. Biomed. Eng., vol. 47, no. 5, pp. 573-577, May 2000.
23. M. Stetter, I. Schiessl, T. Otto, F. Sengpiel, M. Hübener, T. Bonhoeffer, and K. Obermayer, "Principal component analysis and blind separation of sources for optical imaging of intrinsic signals," NeuroImage, vol. 1.1, pp. 482-490, 2000.
24. V. D. Calhoun and T. Adali, "Unmixing fMRI with independent component analysis," IEEE Eng. Med Biol., vol. 25, no. 2, pp. 79-90, Mar./Apr. 2006.
25. S.-J. Park, K.-H. An, and M. Lee, "Aliency map model with adaptive masking based on independent component analysis," Neurocomputing, vol. 49, pp. 417-422, 2002.
26. E. S. Barriga, D. Y. Ts'o, M. S. Pattichis, and P. Soliz, "Independent component analysis for processing of retinal responses to patterned stimuli," in Proc. 25th Annu. Int. Conf. IEEE Eng. Med. Biol Soc., Sep. 2003, vol. 1, pp. 1006-1009.
27. E. S. Barriga, P. W. Truitt, M. S. Pattichis, D. Ts'o, R. H. Kwon, R. H. Kardon, and P. Soliz, "Blind source separation in retinal videos," Proc. SPIE Med. Imaging. 2003 Image Process., vol. 5032, pp. 1591-1601, 2003.
28. E. S. Barriga, P. Soliz, and P. W. Truitt, "Functional signal detection in retinal videos," in 2002 45th Midwest Symp. Circuits Syst. 2002. MWSCAS-2002, 2002, vol. 1, pp. I-443-I-446.
29. H. Chen and D. Yao, "Discussion on the choice of separated components in fMRI data analysis by spatial independent component analysis," Magn. Resonance Imag., vol. 22, pp. 827-833, 2004.
30. M. J. McKeown and T. J. Sejnowski, "Independent component analysis of fMRI data: Examining the assumptions," Human Brain Mapp., vol. 5, pp. 368-372, 1998.
31. A. J. Bell and T. J. Sejnowski, "An information-maximization approach, to blind separation and blind deconvolution," Neural Computation, vol. 7, pp. 1003-1034, 1995.
32. J. Cardoso, "Infomax and maximum, likelihood for blind source separation," IEEE Signal Process. Lett., vol. 4, no. 4, pp. 112-114, Apr. 1997.
33. A. Hyvarinen and E. Oja, "A fast fixed point algorithm, for independent component analysis," Neural Computation, vol. 9, pp. 1483-1492, 1997.
34. A. Belouchrani, K. Abed-Meraim, J. Cardoso, and E. Moulines, "A blind source separation technique using second-order statistics," IEEE Trans. Signal Process., vol. 45, no. 2, pp. 434-444, 1997.
35. T. P. Jung, S. Makeig, M. J. Mckeown, A. J. Bell, T. W. Lee, and T. J. Sejnowski, "Imaging brain dynamics using independent component analysis," Proc. IEEE, vol. 89, no. 7, pp. 1107-1112, Jul. 2001.
36. L. Molgedey and H. G. Schuster, "Separation of a mixture of independent signals using time delayed decorrelations," Phys. Rev. Lett., vol. 72, 1994.
37. A. Mansour, M. Kawamoto, and N. Ohnishi, "A survey of the performance indexes of ICA algorithms," in Proc. 21st IASTED Int. Conf. Modeling, Identification Control (MIC '02), 2002, pp. 660-666.