Rapid identification of Salmo trutta lineages by multiplex PCR utilizing primers tailored to discriminate single nucleotide polymorphisms (SNPs) of the mitochondrial control region

Conservation Genetics

Volumn 8, Issue 5, 2007, Pages 1025-1028

  Apostolidis, Apostolos P ^a   Apostolou, Panagiotis K ^a,b   Georgiadis, Andreas ^a   Sandaltzopoulos, Raphael ^b  

^a ARISTOTLE UNIVERSITY OF THESSALONIKI   (Greece)

^b DEMOCRITUS UNIVERSITY OF THRACE   (Greece)

Author keywords

Control region; Lineage identification; Multiplex PCR; Salmo trutta; SNPs

Indexed keywords

IDENTIFICATION METHOD; MITOCHONDRIAL DNA; PHYLOGENETICS; POLYMERASE CHAIN REACTION; POLYMORPHISM; RANGE EXPANSION; SALMONID;

SALMO TRUTTA;

EID: 34547415466     PISSN: 15660621     EISSN: 15729737     Source Type: Journal    
DOI: 10.1007/s10592-006-9239-1     Document Type: Article

References (9)

1. Ahmadian A, Gharizadeh B, O'Meara D, Odeberg J, Lundeberg J (2001) Genotyping by apyrase-mediated allele-specific extension. Nucleic Acids Res 29:e121
2. Antunes A, Templeton AR, Guyomard R, Alexandrino P (2002) The role of nuclear genes in intraspecific evolutionary inference: genealogy of the transferrin gene in the brown trout. Mol Biol Evol 19:1272-1287
3. Apostolidis AP, Triantaphyllidis C, Kouvatsi A, Economidis PS (1997) Mitochondrial DNA sequence variation and phylogeography among Salmo trutta L. (Greek brown trout) populations. Mol Ecol 6:531-542
4. Bernatchez L (2001) The evolutionary history of brown trout (Salmo trutta L.) inferred from phylogeographic, nested clade, and mismatch analyses of mitochondrial DNA variation. Evolution 33: 351-379
5. Bernatchez L, Guyomard R, Bonhomme F (1992) DNA sequence variation of the mitochondrial control region among geographically and morphologically remote European brown trout Salmo trutta populations. Mol Ecol 1:161-173
6. Cortey M, Pla C, Garcia-Marin JL (2004) Historical biogeography of Mediterranean trout. Mol Phylogenet Evol 33:831-844
7. Hansen MM (2002) Estimating the long-term effects of stocking domesticated trout into wild brown trout (Salmo trutta) populations: an approach using microsatellite DNA analysis of historical and contemporary samples. Mol Ecol 11:1003-1015
8. Hillis DM, Moritz C, Mable BK (1996) Molecular systematics, 2nd edn. Sinauer Associates, Sunderland MA
9. Rozen S, Skaletsky HJ (2000) Primer3 on the WWW for general users and for biologist programmers. In: Krawetz S, Misener S (eds) Bioinformatics methods and protocols: methods in molecular biology. Humana Press, Totowa, pp 365-386