메뉴 건너뛰기




Volumn , Issue , 2006, Pages 135-138

Presenting a novel neural network architecture for membrane protein prediction

Author keywords

Amino acid encoding; Knowledge discovery; Membrane proteins; Neural networks; ROC and AUC; Secondary structure prediction

Indexed keywords

AMINO ACIDS; BIOINFORMATICS; GENE ENCODING; MEMBRANES; NETWORK ARCHITECTURE; PROBLEM SOLVING; PROTEIN FOLDING;

EID: 34547286370     PISSN: None     EISSN: None     Source Type: Conference Proceeding    
DOI: None     Document Type: Conference Paper
Times cited : (2)

References (12)
  • 3
    • 1542576024 scopus 로고    scopus 로고
    • Biological data mining with neural networks: Implementation and application of a flexible decision tree extraction algorithm to genomic problem domains
    • Elsevier, ISSN: 0925-2312
    • Browne, A., Hudson, B. D., Whitley, D. C., Ford, M. G. and Picton, P. (2004) Biological data mining with neural networks: Implementation and application of a flexible decision tree extraction algorithm to genomic problem domains. Neurocomputing, 57, 275-293. Elsevier - ISSN: 0925-2312.
    • (2004) Neurocomputing , vol.57 , pp. 275-293
    • Browne, A.1    Hudson, B.D.2    Whitley, D.C.3    Ford, M.G.4    Picton, P.5
  • 4
    • 34547379860 scopus 로고    scopus 로고
    • Knowledge Discovery in Bioinformatics using Neural Networks Proc. of the 6thInt
    • Jahangirnagar University, Dhaka, Bangladesh. ISBN: 984-584-005-1
    • Bose, S., Browne A., Kazemian H. and White K. (2003) "Knowledge Discovery in Bioinformatics using Neural Networks" Proc. of the 6thInt, Conf. on Computer and Information Technology (ICCIT) 2003, Jahangirnagar University, Dhaka, Bangladesh. ISBN: 984-584-005-1
    • (2003) Conf. on Computer and Information Technology (ICCIT)
    • Bose, S.1    Browne, A.2    Kazemian, H.3    White, K.4
  • 6
    • 34547253645 scopus 로고    scopus 로고
    • Nabnay, I., Bishop, C.: NETLAB software, Aston University, Birmingham, UK, 1997 http://www.ncrg.aston.ac.uk/netlab
    • Nabnay, I., Bishop, C.: NETLAB software, Aston University, Birmingham, UK, 1997 http://www.ncrg.aston.ac.uk/netlab
  • 7
    • 0034495418 scopus 로고    scopus 로고
    • A collection of well characterized integral membrane proteins
    • Möller S., Kriventseva, E. and Apweiler, R. (2000) "A collection of well characterized integral membrane proteins" Bioinformatics 16, 1159-1160.
    • (2000) Bioinformatics , vol.16 , pp. 1159-1160
    • Möller, S.1    Kriventseva, E.2    Apweiler, R.3
  • 8
    • 0001617290 scopus 로고
    • Construction of a membrane protein database and an evaluation of several prediction methods of transmembrane segments
    • Miyano, S, Akutsu, T, Imai, H, Gotoh, O. and Takagi, T, eds, Universal Academy Press, Tokyo, pp
    • Shimizu, T. and Nakai, K. (1994) Construction of a membrane protein database and an evaluation of several prediction methods of transmembrane segments. In Miyano, S., Akutsu, T., Imai, H., Gotoh, O. and Takagi, T. (eds), Proc. Genome Informatics Workshop, Universal Academy Press, Tokyo, pp. 148-149.
    • (1994) Proc. Genome Informatics Workshop , pp. 148-149
    • Shimizu, T.1    Nakai, K.2
  • 9
    • 0031793227 scopus 로고    scopus 로고
    • Prediction of membrane proteins based on classification of transmembrane segments
    • Kihara, D., Shimizu, T. and Kanehisa, M. (1998) Prediction of membrane proteins based on classification of transmembrane segments. Protein Eng., 11, 961-970.
    • (1998) Protein Eng , vol.11 , pp. 961-970
    • Kihara, D.1    Shimizu, T.2    Kanehisa, M.3
  • 10
    • 0036132818 scopus 로고    scopus 로고
    • Transmembrane topology prediction methods: A re-assessment and improvement by a consensus method using a dataset of experimentally-characterized transmembrane topologies
    • Ikeda, M., Arai, M., Lao, D. M. and Shimizu, T. (2002) Transmembrane topology prediction methods: A re-assessment and improvement by a consensus method using a dataset of experimentally-characterized transmembrane topologies. In Silico Biol., 2, 19-33.
    • (2002) In Silico Biol , vol.2 , pp. 19-33
    • Ikeda, M.1    Arai, M.2    Lao, D.M.3    Shimizu, T.4
  • 11
    • 0032834939 scopus 로고    scopus 로고
    • An hierarchical artificial neural network system for the classification of transmembrane proteins
    • Pasquier, C., and Hamodrakas, S. J. (1999a) An hierarchical artificial neural network system for the classification of transmembrane proteins, Protein Eng., 12(8), 631-4.
    • (1999) Protein Eng , vol.12 , Issue.8 , pp. 631-634
    • Pasquier, C.1    Hamodrakas, S.J.2
  • 12
    • 0032989348 scopus 로고    scopus 로고
    • Pasquier C, Promponas VJ, Palaios GA, Hamodrakas JS, Hamodrakas SJ(1999b). A novel method for predicting transmembrane segments in proteins based on a statistical analysis of the SwissProt database: the PRED-TMR algorithm. Protein Eng.:12(5):3.81-5
    • Pasquier C, Promponas VJ, Palaios GA, Hamodrakas JS, Hamodrakas SJ(1999b). A novel method for predicting transmembrane segments in proteins based on a statistical analysis of the SwissProt database: the PRED-TMR algorithm. Protein Eng.:12(5):3.81-5


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.