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Volumn 8, Issue , 2007, Pages

Novel and simple transformation algorithm for combining microarray data sets

Author keywords

[No Author keywords available]

Indexed keywords

ANOVA (ANALYSIS OF VARIANCE); CORRELATION COEFFICIENT; EXPERIMENTAL CONDITIONS; EXPERIMENTAL ENVIRONMENT; HIERARCHICAL CLUSTERING ANALYSIS; MICROARRAY TECHNOLOGIES; TRANSFORMATION ALGORITHM; TRANSFORMATION METHODS;

EID: 34447528847     PISSN: None     EISSN: 14712105     Source Type: Journal    
DOI: 10.1186/1471-2105-8-218     Document Type: Article
Times cited : (9)

References (23)
  • 1
    • 0037657596 scopus 로고    scopus 로고
    • Loss of compartmentalization causes misregulation of lysine biosynthesis in peroxisome-deficient yeast cells
    • 138764 12477798 10.1128/EC.1.6.978-986.2002
    • Breitling R Sharif O Hartman ML Krisans SK Loss of compartmentalization causes misregulation of lysine biosynthesis in peroxisome-deficient yeast cells Eukaryot Cell 2002 1 978-986 138764 12477798 10.1128/ EC.1.6.978-986.2002
    • (2002) Eukaryot Cell , vol.1 , pp. 978-986
    • Breitling, R.1    Sharif, O.2    Hartman, M.L.3    Krisans, S.K.4
  • 2
    • 4944232237 scopus 로고    scopus 로고
    • Combining multiple microarray studies and modeling interstudy variation
    • 10.1093/bioinformatics/btg1010
    • Choi JK Yu U Kim S Yoo OJ Combining multiple microarray studies and modeling interstudy variation Bioinformatics(Suppl) 2003 19 I84-I90 10.1093/bioinformatics/btg1010
    • (2003) Bioinformatics(Suppl) , vol.19
    • Choi, J.K.1    Yu, U.2    Kim, S.3    Yoo, O.J.4
  • 3
    • 0037862042 scopus 로고    scopus 로고
    • Integration and cross-validation of high-throughput gene expression data: Comparing heterogeneous data sets
    • 10.1016/S0014-5793(03)00522-2 12829243
    • Detours V Dumont JE Bersini H Maenhaut C Integration and cross-validation of high-throughput gene expression data: Comparing heterogeneous data sets FEBS Letters 2003 546 98-102 10.1016/ S0014-5793(03)00522-2 12829243
    • (2003) FEBS Letters , vol.546 , pp. 98-102
    • Detours, V.1    Dumont, J.E.2    Bersini, H.3    Maenhaut, C.4
  • 4
    • 0036178995 scopus 로고    scopus 로고
    • Control genes and variability: Absence of ubiquitous reference transcripts in diverse mammalian expression studies
    • 155273 11827948 10.1101/gr.217802
    • Lee PD Sladek R Greenwood CM Hudson TJ Control genes and variability: Absence of ubiquitous reference transcripts in diverse mammalian expression studies Genome Research 2002 12 292-297 155273 11827948 10.1101/gr.217802
    • (2002) Genome Research , vol.12 , pp. 292-297
    • Lee, P.D.1    Sladek, R.2    Greenwood, C.M.3    Hudson, T.J.4
  • 5
    • 0037226593 scopus 로고    scopus 로고
    • A molecular signature of metastasis in primary solid tumors
    • 10.1038/ng1060 12469122
    • Ramaswamy S Ross KN Lander ES Golub TR A molecular signature of metastasis in primary solid tumors Nat Genet 2003 33 49-54 10.1038/ ng1060 12469122
    • (2003) Nat Genet , vol.33 , pp. 49-54
    • Ramaswamy, S.1    Ross, K.N.2    Lander, E.S.3    Golub, T.R.4
  • 6
    • 0036682376 scopus 로고    scopus 로고
    • Meta-analysis of microarrays: Interstudy validation of gene expression profiles reveals pathway dysregulation in prostate cancer
    • 12154050
    • Rhodes DR Barrette TR Rubin MA Ghosh D Chinnaiyan AM Meta-analysis of microarrays: Interstudy validation of gene expression profiles reveals pathway dysregulation in prostate cancer Cancer Res 2002 62 4427-4433 12154050
    • (2002) Cancer Res , vol.62 , pp. 4427-4433
    • Rhodes, D.R.1    Barrette, T.R.2    Rubin, M.A.3    Ghosh, D.4    Chinnaiyan, A.M.5
  • 9
    • 0036211063 scopus 로고    scopus 로고
    • Analysis of matched mRNA measurements from two different microarray technologies
    • 10.1093/bioinformatics/18.3.405 11934739
    • Kuo WP Jenssen TK Butte AJ Lucila OM Kohane IS Analysis of matched mRNA measurements from two different microarray technologies Bioinformatics 2002 18 3 405-412 10.1093/bioinformatics/18.3.405 11934739
    • (2002) Bioinformatics , vol.18 , Issue.3 , pp. 405-412
    • Kuo, W.P.1    Jenssen, T.K.2    Butte, A.J.3    Lucila, O.M.4    Kohane, I.S.5
  • 11
    • 0034730140 scopus 로고    scopus 로고
    • Singular value decomposition for genome-wide expression data processing and modelling
    • 27718 10963673 10.1073/pnas.97.18.10101
    • Alter O Patrick OB David B Singular value decomposition for genome-wide expression data processing and modelling Proc Natl Acad Sci USA 2000 97 10101-10106 27718 10963673 10.1073/pnas.97.18.10101
    • (2000) Proc Natl Acad Sci USA , vol.97 , pp. 10101-10106
    • Alter, O.1    Patrick, O.B.2    David, B.3
  • 13
  • 14
    • 13244289883 scopus 로고    scopus 로고
    • Joint analysis of two microarray gene-expression data sets to select lung adenocarcinoma marker genes
    • 476733 15217521 10.1186/1471-2105-5-81
    • Jiang H Deng Y Chen HS Tao L Sha Q Chen J Tsai CJ Zhang S Joint analysis of two microarray gene-expression data sets to select lung adenocarcinoma marker genes BMC Bioinformatics 2004 5 81 476733 15217521 10.1186/1471-2105-5-81
    • (2004) BMC Bioinformatics , vol.5 , pp. 81
    • Jiang, H.1    Deng, Y.2    Chen, H.S.3    Tao, L.4    Sha, Q.5    Chen, J.6    Tsai, C.J.7    Zhang, S.8
  • 15
    • 33747874717 scopus 로고    scopus 로고
    • Combining multiple microarrays in the presence of controlling variables
    • 10.1093/bioinformatics/btl183
    • Park TS Yi SG Shin YK Lee SY Combining multiple microarrays in the presence of controlling variables Bioinformatics 2006 2 14 1682-1689 10.1093/bioinformatics/btl183
    • (2006) Bioinformatics , vol.2 , Issue.14 , pp. 1682-1689
    • Park, T.S.1    Yi, S.G.2    Shin, Y.K.3    Lee, S.Y.4
  • 18
    • 33750433538 scopus 로고    scopus 로고
    • The role of MYH and microsatellite instability in the development of sporadic colorectal cancer
    • 10.1038/sj.bjc.6603421 17031395
    • Colebatch A Hitchins M Williams M Meagher A Hawkins NJ Ward RL The role of MYH and microsatellite instability in the development of sporadic colorectal cancer British Journal of Cancer 2006 95 1239-1243 10.1038/ sj.bjc.6603421 17031395
    • (2006) British Journal of Cancer , vol.95 , pp. 1239-1243
    • Colebatch, A.1    Hitchins, M.2    Williams, M.3    Meagher, A.4    Hawkins, N.J.5    Ward, R.L.6
  • 21
    • 2442672860 scopus 로고    scopus 로고
    • Systematic analysis of T7 RNA polymerase based in vitro linear RNA amplification for use in microarray experiments
    • 419340 15119961 10.1186/1471-2164-5-29
    • Schneider J Buneß A Huber A Volz J Kioschis P Hafner M Poustka A Sültmann H Systematic analysis of T7 RNA polymerase based in vitro linear RNA amplification for use in microarray experiments BMC Genomics 2004 5 29 419340 15119961 10.1186/1471-2164-5-29
    • (2004) BMC Genomics , vol.5 , pp. 29
    • Schneider, J.1    Buneß, A.2    Huber, A.3    Volz, J.4    Kioschis, P.5    Hafner, M.6    Poustka, A.7    Sültmann, H.8
  • 22
    • 79951780811 scopus 로고    scopus 로고
    • R: A language and environment for statistical computing
    • R: A language and environment for statistical computing http://www.R-project.org
  • 23
    • 0041382385 scopus 로고    scopus 로고
    • Statistics Department, University of California, Berkeley 33
    • Breiman L Random Forests Statistics Department, University of California, Berkeley 2001 1-33
    • (2001) Random Forests , pp. 1-33
    • Breiman, L.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.