Advantages of mRNA amplification for microarray analysis

BioTechniques

Volumn 33, Issue 4, 2002, Pages 906-914

  Feldman, A L ^a   Costouros, N G ^a   Wang, E ^a   Qian, M ^a   Marincola, F M ^a   Alexander, H R ^a   Libutti, Steven K ^a  

^a NATIONAL INSTITUTES OF HEALTH   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

BIOPSY; DNA; GENES; RNA;

GENE EXPRESSION; MICROARRAY ANALYSIS; MICRODISSECTION;

GENETIC ENGINEERING;

MESSENGER RNA;

ANALYTIC METHOD; ANIMAL CELL; ARTICLE; ASPIRATION BIOPSY; DNA MICROARRAY; GENE AMPLIFICATION; GENE EXPRESSION; GENETIC ANALYSIS; MOUSE; NONHUMAN; POLYMERASE CHAIN REACTION;

ANIMALIA;

EID: 0036794673     PISSN: 07366205     EISSN: None     Source Type: Journal    
DOI: 10.2144/02334mt04     Document Type: Article

References (13)

1. Brown, P.O. and D. Botstein. 1999. Exploring the new world of the genome with DNA microarrays. Nat. Genet. 21:33-37.
2. Collins, F.S. 2001. Contemplating the end of the beginning. Genome Res. 11:641-643.
3. DeRisi, J., L. Penland, P.O. Brown, M.L. Bittner, P.S. Meltzer, M. Ray, Y. Chen, Y.A. Su, et al. 1996. Use of a cDNA microarray to analyze gene expression patterns in human cancer. Nat. Genet. 14:457-460.
4. Florell, S.R., C.M. Coffin, J.A. Holden, J.W. Zimmermann, J.W. Gerwels, B.K. Summers, D.A. Jones, and S.A. Leachman. 2001. Preservation of RNA for functional genomic studies: a multidisciplinary tumor bank protocol. Mod. Pathol. 14:116-128.
5. Gewolb, J. 2001. Genomics. Animals line up to be sequenced. Science 293:409-410.
6. Kammula, U.S., K.H. Lee, A.I. Riker, E. Wang, G.A. Ohnmacht, S.A. Rosenberg and F.M. Marincola. 1999. Functional analysis of antigen-specific T lymphocytes by serial measurement of gene expression in peripheral blood mononuclear cells and tumor specimens. J. Immunol. 163:6867-6875.
7. Luo, L., R.C. Salunga, H. Guo, A. Bittner, K.C. Joy, J.E. Galindo, H. Xiao, K.E. Rogers, et al. 1999. Gene expression profiles of laser-captured adjacent neuronal subtypes. Nat. Med. 5:117-122.
8. Nagle, R.B. 2001. New molecular approaches to tissue analysis. J. Histochem. Cytochem. 49:1063-1064.
9. Ohnmacht, G.A., E. Wang, S. Mocellin, A. Abati, A. Filie, P. Fetsch, A.I. Riker, U.S. Kammula, et al. 2001. Short-term kinetics of tumor antigen expression in response to vaccination. J. Immunol. 167:1809-1820.
10. Ohyama, H., X. Zhang, Y. Kohno, I. Alevizos, M. Posner, D.T. Wong, and R. Todd. 2000. Laser capture microdissection-generated target sample for high-density oligonucleotide array hybridization. BioTechniques 29:530-536.
11. Phillips, J. and J.H. Eberwine. 1996. Antisense RNA amplification: a linear amplification method for analyzing the mRNA population from single living cells. Methods 10:283-288.
12. Wang, E., L.D. Miller, G.A. Ohnmacht, E.T. Liu, and F.M. Marincola. 2000. High-fidelity mRNA amplification for gene profiling. Nat. Biotechnol. 18:457-459.
13. Zogakis, T.G., N.G. Costouros, E.A. Kruger, S. Forbes, M. He, M. Qian, A.L. Feldman, W.D. Figg, et al. Microarray gene expression profiling of angiogenesis inhibitors using the rat aortic ring assay. BioTechniques (In Press.)