Support vector machine based prediction of glutathione S-transferase proteins

Protein and Peptide Letters

Volumn 14, Issue 6, 2007, Pages 575-580

  Mishra, Nitish Kumar ^a   Kumar, Manish ^a   Raghava, G P S ^a  

^a INSTITUTE OF MICROBIAL TECHNOLOGY   (India)

Author keywords

Artificial intelligence; Correlation; GST protein; Sensitivity; Specificity; Support vector machine

Indexed keywords

EID: 34447271237     PISSN: 09298665     EISSN: None     Source Type: Journal    
DOI: 10.2174/092986607780990046     Document Type: Article

References (40)

1. Boyland, E. and Chasseuad, L.F. (1969) Adv. Enzymol. Rela. Areas Mol. Biol., 32, 173.
2. Sheehan, D. and Meade, G. (2001) Biochem. J., 360, 1.
3. McIlwain, C.C., Townsend, D.M. and Tew, K.D. (2006) Oncogene, 25, 1639.
4. Walters, M.J. and Baan, R.A. (1998) Br. J. Cancer, 77, 556.
5. Muller, M., Meijer, C., Zaman, G.J.R., Borst, P., Scheper, R.J., Mulder, N.H., de Vries E.G.E. and Jansen, P.L.M. (1994) Proc. Natl. Acad. Sci. USA, 91, 13033.
6. Townsend, D.M. (2003) Oncogene, 22, 7369.
7. Kramer, R.A. and Kim, G. (1988) Science, 241, 694.
8. Black, S.M. and Sakai, M. (1990) Biochem. J., 268, 309.
9. Morrow, C.S. and Cowan, K.H. (1990) Cancer Cells, 2, 15.
10. Bastin, G., Sinha, B. and Cowan, K.H. (1986) J. Biol. Chem., 261, 15544.
11. Moscow, J.A. and Cowan, K.H. (1989) Mol. Pharmacol., 36, 22.
12. Puchalski, R.B. and Fahal, W.E. (1990) Proc. Natl. Acad. Sci., 87, 2443.
13. Hayes, J.D. and Pulford, D.J. (1995) Crit. Rev. Biochem. Mol. Biol., 30, 445.
14. Tew, K.D. (1994) Cancer Res., 54, 4313.
15. Liu, M., Pelling, J.C. and Brash, D.E. (1998) Cancer Res., 58, 1723.
16. Peterson, J.D. and Herzenberg, L.A. (1998) Proc. Natl. Acad. Sci. USA, 95, 3071.
17. Herzenberg, L.A. and DeRosa, S.C. (1997) Proc. Natl. Acad. Sci. USA, 94, 1967.
18. Piker, P.J. (1984) Physiol. Rev., 64, 744.
19. Ford-Hutchinson, A.W. (1990) Crit. Rev. Immunol., 10, 1.
20. Alstchul, S.F. and Lipman, D.J. (1990) J Mol Biol., 215, 403.
21. Alstchul, S.F. and Lipman, D.J. (1997) Nucleic Acids Res., 25, 3389.
22. Pearson, W.R. and Lipman, D.J. (1988) Proc. Natl. Acad. Sci. USA, 85, 2444.
23. Reinhardt, A. and Hubbard, T. (1998) Nucleic Acids Res., 26, 2230.
24. Boeckmann, B. and Bairoch, A. (2003) Nucleic Acids Res., 31, 365.
25. Weizhong, Li. (2006) Bioinformatics, 22, 1658.
26. Kumar M., Bhasin, M. and Raghava, G.P.S. (2005) Nucleic Acids Res., 33, 154.
27. Bhasin, M. and Raghava, G. P. S. (2004) Nucleic Acids Res., 32, W414.
28. Sweats, J.A. (1988) Science, 240, 1285.
29. Zvaljevaski, N. and Stevens, F.J. (2002) Bioinformatics, 18, 689.
30. Joachims, T. (1999) in Advanced in Kernel Methods-Support Vector Learning (eds. Scholkopf B., et al.) pp. 42-56. MIT Press, Cambridge.
31. Rabiner, L.R. (1989) Proc. I.E.E.E., 77, 257.
32. Krogh, A. and Brown, M. (1994) J. Mol. Biol., 235, 1501.
33. Thompson, J.D. and Gibson, T.J., (1994) Nucleic Acids Res., 22, 4673.
34. Dirr, H.W. and Huber, R. (1994) Eur. J. Biochem., 220, 645.
35. Liu, S., Johnson, W.W. and Armstrong, R.N. (1992) J. Biol. Chem., 268, 4296.
36. Dixon, D.P., Lapthron, A. and Edward, R. (2002) Genome Biol., 3, 3004.
37. Krogh, A. and Riis, S.K. (1996). in Advanced in Neural Information Processing System 8 (Touretzky, D.S., Mozer, M.C. (eds.)) pp. 917-923. MIT Press, Cambridge.
38. Bhasin, M., Garag, A. and Raghava, G.P.S. (2005) Bioinformatics, 21, 2522.
39. Garg, A., Bhasin, M. and Raghava, G.P.S. (2005) J Biol. Chem., 280, 14427.
40. Kaur, H. and Raghava, G.P.S. (2004) Proteins, 55, 83.