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Volumn 8, Issue , 2007, Pages

Do anesthetics and sampling strategies affect transcription analysis of fish tissues?

Author keywords

[No Author keywords available]

Indexed keywords

ADENOSINE TRIPHOSPHATASE (POTASSIUM SODIUM); ADENOSINE TRIPHOSPHATASE (POTASSIUM SODIUM) ALPHA1B; HYPOXIA INDUCIBLE FACTOR 1; ISOEUGENOL; NITROGEN; RNA; SEA WATER; TRICAINE; UNCLASSIFIED DRUG; AMINOBENZOIC ACID DERIVATIVE; ANESTHETIC AGENT; DRUG DERIVATIVE; EUGENOL;

EID: 34347401798     PISSN: None     EISSN: 14712199     Source Type: Journal    
DOI: 10.1186/1471-2199-8-48     Document Type: Article
Times cited : (23)

References (27)
  • 1
    • 28644452204 scopus 로고    scopus 로고
    • Towards standardization of RNA quality assessment using user-independent classifiers of microcapillary electrophoresis traces
    • 1072807 15800207 10.1093/nar/gni054
    • Imbeaud S Graudens E Boulanger V Barlet X Zaborski P Eveno E Mueller O Schroeder A Auffray C Towards standardization of RNA quality assessment using user-independent classifiers of microcapillary electrophoresis traces Nucleic Acids Res 2005 33 e56 1072807 15800207 10.1093/nar/gni054
    • (2005) Nucleic Acids Res , vol.33
    • Imbeaud, S.1    Graudens, E.2    Boulanger, V.3    Barlet, X.4    Zaborski, P.5    Eveno, E.6    Mueller, O.7    Schroeder, A.8    Auffray, C.9
  • 3
    • 34347401934 scopus 로고    scopus 로고
    • RT-PCR: The basic
    • RT-PCR: The basic http://www.ambion.com/techlib/basics/rtpcr/index.html
  • 4
    • 0345257783 scopus 로고    scopus 로고
    • Chipping away at the chip bias: RNA degradation in microarray analysis
    • 10.1038/ng1203-292 14647279
    • Auer H Lyianarachchi S Newsom D Klisovic MI Marcucci G Kornacker K Chipping away at the chip bias: RNA degradation in microarray analysis Nat Genet 2003 35 292-293 10.1038/ng1203-292 14647279
    • (2003) Nat Genet , vol.35 , pp. 292-293
    • Auer, H.1    Lyianarachchi, S.2    Newsom, D.3    Klisovic, M.I.4    Marcucci, G.5    Kornacker, K.6
  • 5
    • 0021268625 scopus 로고
    • Effects of metacaine and its decomposition products on the excitation mechanism of isolated myelinated nerve fibers
    • 6093825
    • Sommer RG Werner U Koppenhofer E Haller R Effects of metacaine and its decomposition products on the excitation mechanism of isolated myelinated nerve fibers Arzneimittelforschung 1984 34 860-4 6093825
    • (1984) Arzneimittelforschung , vol.34 , pp. 860-864
    • Sommer, R.G.1    Werner, U.2    Koppenhofer, E.3    Haller, R.4
  • 6
    • 34347393014 scopus 로고    scopus 로고
    • Salmon smolt (Salmo salar L) production and stress reducing measures. The effects of AQUI-S sedation during vaccination, transport and transfer to sea on survivability, appetite, growth, immunological capacity, primary, secondary and tertiary stress response
    • Nordland Research Institute - NF report no 5/2005
    • Iversen M Eliassen RA Salmon smolt (Salmo salar L) production and stress reducing measures. The effects of AQUI-S sedation during vaccination, transport and transfer to sea on survivability, appetite, growth, immunological capacity, primary, secondary and tertiary stress response Nordland Research Institute - NF report no 5/2005 1-55
    • Iversen, M.1    Eliassen, R.A.2
  • 7
    • 0037402559 scopus 로고    scopus 로고
    • The efficacy of metomidate, clove oil, Aqui-S (TM) and Benzoak (R) as anaesthetics in Atlantic salmon (Salmo salar L) smolts, and their potential stress-reducing capacity
    • 10.1016/S0044-8486(03)00111-X
    • Iversen M Finstad B McKinley RS Eliassen RA The efficacy of metomidate, clove oil, Aqui-S (TM) and Benzoak (R) as anaesthetics in Atlantic salmon (Salmo salar L) smolts, and their potential stress-reducing capacity Aquaculture 2003 221 1-4 549-566 10.1016/S0044-8486(03)00111-X
    • (2003) Aquaculture , vol.221 , Issue.1-4 , pp. 549-566
    • Iversen, M.1    Finstad, B.2    McKinley, R.S.3    Eliassen, R.A.4
  • 8
    • 0003004587 scopus 로고
    • Physiological changes in fish from stress in aquaculture with emphasis on the response and effects of corticosteroids
    • 10.1016/0959-8030(91)90019-G
    • Barton BA Iwama GK Physiological changes in fish from stress in aquaculture with emphasis on the response and effects of corticosteroids Ann Rev Fish Dis 1991 1 3-26 10.1016/0959-8030(91)90019-G
    • (1991) Ann Rev Fish Dis , vol.1 , pp. 3-26
    • Barton, B.A.1    Iwama, G.K.2
  • 9
    • 0037752925 scopus 로고    scopus 로고
    • The stress response in fish
    • 9234959
    • Wendelaar Bonga SE The stress response in fish Physiol Rev 1997 77 591-625 9234959
    • (1997) Physiol Rev , vol.77 , pp. 591-625
    • Wendelaar Bonga, S.E.1
  • 10
    • 0036625843 scopus 로고    scopus 로고
    • Stress in Fishes: A Diversity of Responses with Particular Reference to Changes in Circulating Corticosteroids
    • 10.1093/icb/42.3.517
    • Barton BA Stress in Fishes: A Diversity of Responses with Particular Reference to Changes in Circulating Corticosteroids Integr Comp Biol 2002 42 517-525 10.1093/icb/42.3.517
    • (2002) Integr Comp Biol , vol.42 , pp. 517-525
    • Barton, B.A.1
  • 11
    • 33746026650 scopus 로고    scopus 로고
    • Immunomodulatory effects of beta-glucan on neutrophil function in fathead minnows (Pimephales promelas Rafinesque, 1820)
    • 10.1016/j.dci.2005.11.004
    • Palic D Andreasen CB Herolt DM Menzel BW Roth JA Immunomodulatory effects of beta-glucan on neutrophil function in fathead minnows (Pimephales promelas Rafinesque, 1820) Develop Comp Immunol 2006 30 9 817-830 10.1016/j.dci.2005.11.004
    • (2006) Develop Comp Immunol , vol.30 , Issue.9 , pp. 817-830
    • Palic, D.1    Andreasen, C.B.2    Herolt, D.M.3    Menzel, B.W.4    Roth, J.A.5
  • 12
    • 0037468953 scopus 로고    scopus 로고
    • Anesthetic efficacy of metomidate and comparison of plasma cortisol responses to tricaine methanesulfonate, quinaldine and clove oil anesthetized channel catfish Ictalurus punctatus
    • 10.1016/S0044-8486(02)00302-2
    • Small BC Anesthetic efficacy of metomidate and comparison of plasma cortisol responses to tricaine methanesulfonate, quinaldine and clove oil anesthetized channel catfish Ictalurus punctatus Aquaculture 2003 218 177-185 10.1016/S0044-8486(02)00302-2
    • (2003) Aquaculture , vol.218 , pp. 177-185
    • Small, B.C.1
  • 13
    • 0037162854 scopus 로고    scopus 로고
    • Physiological stress responses, egg survival and sperm motility for rainbow trout broodstock anesthetized with clove oil, tricaine methanesulfonate or carbon dioxide
    • 10.1016/S0044-8486(01)00878-X
    • Wagner E Arndt R Hilton B Physiological stress responses, egg survival and sperm motility for rainbow trout broodstock anesthetized with clove oil, tricaine methanesulfonate or carbon dioxide Aquaculture 2002 211 353-366 10.1016/S0044-8486(01)00878-X
    • (2002) Aquaculture , vol.211 , pp. 353-366
    • Wagner, E.1    Arndt, R.2    Hilton, B.3
  • 14
    • 0021343466 scopus 로고
    • The mechanisms of acid-base and ionoregulation in the freshwater rainbow trout during environmental hyperoxia and subsequent normoxia. I. Extra and intracellular acid-base status
    • 10.1016/0034-5687(84)90019-7 6427870
    • Hobe H Wood CM Wheatly MG The mechanisms of acid-base and ionoregulation in the freshwater rainbow trout during environmental hyperoxia and subsequent normoxia. I. Extra and intracellular acid-base status Respir Physiol 1984 55 139-154 10.1016/0034-5687(84)90019-7 6427870
    • (1984) Respir Physiol , vol.55 , pp. 139-154
    • Hobe, H.1    Wood, C.M.2    Wheatly, M.G.3
  • 15
    • 0001261640 scopus 로고
    • Hypercapnic acidosis in the rainbow trout (Salmo gairdneri). I. Branchial ionic fluxes and blood acid-base status
    • Perry SF Malone S Ewing D Hypercapnic acidosis in the rainbow trout (Salmo gairdneri). I. Branchial ionic fluxes and blood acid-base status Can J Zool 1987 65 888-895
    • (1987) Can J Zool , vol.65 , pp. 888-895
    • Perry, S.F.1    Malone, S.2    Ewing, D.3
  • 16
    • 2942561052 scopus 로고    scopus 로고
    • Genome-wide analysis of mRNA stability using transcription inhibitors and microarrays reveals posttranscriptional control of ribosome biogenesis factors
    • 419893 15169913 10.1128/MCB.24.12.5534-5547.2004
    • Grigull J Mnaimneh S Pootoolal J Robinson MD Hughes TR Genome-wide analysis of mRNA stability using transcription inhibitors and microarrays reveals posttranscriptional control of ribosome biogenesis factors Mol Cell Biol 2004 24 5534-5547 419893 15169913 10.1128/ MCB.24.12.5534-5547.2004
    • (2004) Mol Cell Biol , vol.24 , pp. 5534-5547
    • Grigull, J.1    Mnaimneh, S.2    Pootoolal, J.3    Robinson, M.D.4    Hughes, T.R.5
  • 17
    • 0347992786 scopus 로고    scopus 로고
    • Improvement of extraction and processing of RNA from renal biopsies
    • 10.1111/j.1523-1755.2004.00366.x 14675040
    • Roos-van Groningen MC Eikmans M Baelde HJ de Heer E Bruijn JA Improvement of extraction and processing of RNA from renal biopsies Kidney Int 2004 65 97-105 10.1111/j.1523-1755.2004.00366.x 14675040
    • (2004) Kidney Int , vol.65 , pp. 97-105
    • Roos-van Groningen, M.C.1    Eikmans, M.2    Baelde, H.J.3    de Heer, E.4    Bruijn, J.A.5
  • 18
    • 33644975004 scopus 로고    scopus 로고
    • RNA integrity and the effect on the real-time qRT-PCR performance
    • 10.1016/j.mam.2005.12.003 16469371
    • Fleige S Pfaffl MW RNA integrity and the effect on the real-time qRT-PCR performance Mol Aspects Med 2006 27 126-39 10.1016/j.mam.2005.12.003 16469371
    • (2006) Mol Aspects Med , vol.27 , pp. 126-139
    • Fleige, S.1    Pfaffl, M.W.2
  • 19
    • 0029973094 scopus 로고    scopus 로고
    • Interrelationships of the pathways of mRNA decay and translation in eukaryotic cells
    • 10.1146/annurev.bi.65.070196.003401 8811193
    • Jacobson A Peltz SW Interrelationships of the pathways of mRNA decay and translation in eukaryotic cells Annu Rev Biochem 1996 65 693-739 10.1146/ annurev.bi.65.070196.003401 8811193
    • (1996) Annu Rev Biochem , vol.65 , pp. 693-739
    • Jacobson, A.1    Peltz, S.W.2
  • 20
    • 0346399721 scopus 로고    scopus 로고
    • Na+/K+-ATPase alpha-isoform switching in gills of rainbow trout (Oncorhynchus mykiss) during salinity transfer
    • 10.1242/jeb.00701 14610032
    • Richards JG Semple JW Bystriansky JS Schulte PM Na+/K+-ATPase alpha-isoform switching in gills of rainbow trout (Oncorhynchus mykiss) during salinity transfer J Exp Biol 2003 206 4475-4486 10.1242/jeb.00701 14610032
    • (2003) J Exp Biol , vol.206 , pp. 4475-4486
    • Richards, J.G.1    Semple, J.W.2    Bystriansky, J.S.3    Schulte, P.M.4
  • 21
    • 33745654522 scopus 로고    scopus 로고
    • Reciprocal expression of gill Na+/K+-ATPase alpha-subunit isoforms alpha1a and alpha1b during seawater acclimation of three salmonid fishes that vary in their salinity tolerance
    • 10.1242/jeb.02188 16651551
    • Bystriansky JS Richards JG Schulte PM Ballantyne JS Reciprocal expression of gill Na+/K+-ATPase alpha-subunit isoforms alpha1a and alpha1b during seawater acclimation of three salmonid fishes that vary in their salinity tolerance J Exp Biol 2006 209 1848-58 10.1242/ jeb.02188 16651551
    • (2006) J Exp Biol , vol.209 , pp. 1848-1858
    • Bystriansky, J.S.1    Richards, J.G.2    Schulte, P.M.3    Ballantyne, J.S.4
  • 22
    • 0035852651 scopus 로고    scopus 로고
    • Hypoxia-induced gene expression profiling in the euryoxic fish Gillichthys mirabilis
    • 29370 11172064 10.1073/pnas.98.4.1993
    • Gracey AY Troll JV Somero GN Hypoxia-induced gene expression profiling in the euryoxic fish Gillichthys mirabilis Proc Natl Acad Sci 2001 98 1993-1998 29370 11172064 10.1073/pnas.98.4.1993
    • (2001) Proc Natl Acad Sci , vol.98 , pp. 1993-1998
    • Gracey, A.Y.1    Troll, J.V.2    Somero, G.N.3
  • 23
    • 3042816190 scopus 로고    scopus 로고
    • Hypoxia-inducible factor-1 alpha in non small cell lung cancer: Relation to growth factor, protease and apoptosis pathways
    • 10.1002/ijc.20052 15185341
    • Swinson DE Jones JL Cox G Richardson D Harris AL O'Byrne KJ Hypoxia-inducible factor-1 alpha in non small cell lung cancer: Relation to growth factor, protease and apoptosis pathways Int J Cancer 2004 111 43-50 10.1002/ijc.20052 15185341
    • (2004) Int J Cancer , vol.111 , pp. 43-50
    • Swinson, D.E.1    Jones, J.L.2    Cox, G.3    Richardson, D.4    Harris, A.L.5    O'Byrne, K.J.6
  • 24
    • 17044410482 scopus 로고    scopus 로고
    • Characterisation of salmon and trout CD8a and CD8b
    • 10.1016/j.molimm.2004.11.017 15829311
    • Moore LJ Somamoto T Lie KK Dijkstra JM Hordvik I Characterisation of salmon and trout CD8a and CD8b Mol Immunol 2005 42 1225-1234 10.1016/ j.molimm.2004.11.017 15829311
    • (2005) Mol Immunol , vol.42 , pp. 1225-1234
    • Moore, L.J.1    Somamoto, T.2    Lie, K.K.3    Dijkstra, J.M.4    Hordvik, I.5
  • 25
    • 28344455318 scopus 로고    scopus 로고
    • Evaluation of potential reference genes in real time RT-PCR studies of Atlantic salmon
    • 1314898 16293192 10.1186/1471-2199-6-21
    • Olsvik PA Lie KK Jordal AE Nilsen TO Hordvik I Evaluation of potential reference genes in real time RT-PCR studies of Atlantic salmon BMC Mol Biol 2005 6 21 1314898 16293192 10.1186/1471-2199-6-21
    • (2005) BMC Mol Biol , vol.6 , pp. 21
    • Olsvik, P.A.1    Lie, K.K.2    Jordal, A.E.3    Nilsen, T.O.4    Hordvik, I.5
  • 26
    • 34247646111 scopus 로고    scopus 로고
    • Lysine intake affects gene expression of anabolic hormones in Atlantic salmon, Salmo salar
    • doi: 10.1016/j.ygcen.2007.02.015 10.1016/j.ygcen.2007.02.015 17400223
    • Hevrøy EM El-Mowafi A Taylor RG Olsvik PA Norberg B Espe M Lysine intake affects gene expression of anabolic hormones in Atlantic salmon, Salmo salar Gen Comp Endocrinol 2007 152 1 39-46 doi: 10.1016/ j.ygcen.2007.02.015 10.1016/j.ygcen.2007.02.015 17400223
    • (2007) Gen Comp Endocrinol , vol.152 , Issue.1 , pp. 39-46
    • Hevrøy, E.M.1    El-Mowafi, A.2    Taylor, R.G.3    Olsvik, P.A.4    Norberg, B.5    Espe, M.6
  • 27
    • 0037129827 scopus 로고    scopus 로고
    • Accurate normalization of real-time quantitative RT-PCR data by geometric averaging of multiple internal control genes
    • research0034.1 0034.11 10.1186/gb-2002-3-7-research0034
    • Vandesompele J Preter KD Pattyn F Poppe B Roy NV Paepe AD Speleman F Accurate normalization of real-time quantitative RT-PCR data by geometric averaging of multiple internal control genes Genome Biol 2002 3 research0034.1 0034.11 10.1186/gb-2002-3-7-research0034
    • (2002) Genome Biol , vol.3
    • Vandesompele, J.1    Preter, K.D.2    Pattyn, F.3    Poppe, B.4    Roy, N.V.5    Paepe, A.D.6    Speleman, F.7


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