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2642551574
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Cheng, D.1
Yadav, N.2
King, R.W.3
Swanson, M.S.4
Weinstein, E.J.5
Bedford, M.T.6
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6
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33947685838
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Ragno R., Simeoni S., Castellano S., Vicidomini C., Mai A., Caroli A., Tramontano A., Bonaccini C., Trojer P., Bauer I., Brosch G., and Sbardella G. J. Med. Chem. 50 (2007) 1241
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Ragno, R.1
Simeoni, S.2
Castellano, S.3
Vicidomini, C.4
Mai, A.5
Caroli, A.6
Tramontano, A.7
Bonaccini, C.8
Trojer, P.9
Bauer, I.10
Brosch, G.11
Sbardella, G.12
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7
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34247281570
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Costi R., Di Santo R., Artico M., Miele G., Valentini P., Novellino E., and Cereseto A. J. Med. Chem. 50 (2007) 1973
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Costi, R.1
Di Santo, R.2
Artico, M.3
Miele, G.4
Valentini, P.5
Novellino, E.6
Cereseto, A.7
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8
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34249066117
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Spannhoff A., Heinke R., Bauer I., Trojer P., Metzger E., Gust R., Schüle R., Brosch G., Sippl W., and Jung M. J. Med. Chem. 50 (2007) 2319
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Spannhoff, A.1
Heinke, R.2
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Trojer, P.4
Metzger, E.5
Gust, R.6
Schüle, R.7
Brosch, G.8
Sippl, W.9
Jung, M.10
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9
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34347381132
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note
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The program OMEGA, Openeye was used to generate the 3D structures of the HKI compounds considering all possible stereoisomers and the MOE 2006.8 program was used to store all structures and docking results. The Hans-Knöll-Institute Database was obtained from the collection of natural products, derivatives and synthetic analogues and comprises about 9000 compounds. Those compounds have been mainly provided by more than 80 research groups worldwide.
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10
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34347395176
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note
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6
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11
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0031552362
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Jones G., Willet P., Glen R.C., Leach A.R., and Taylor R. J. Mol. Biol. 267 (1997) 727
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Jones, G.1
Willet, P.2
Glen, R.C.3
Leach, A.R.4
Taylor, R.5
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34347368925
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note
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Using MACCS fingerprints, a Tanimoto coefficient >0.5 and the similarity search module within MOE we searched for analogues of 4.
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13
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4143111261
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Trojer P., Dangl M., Bauer I., Graessle S., Loidl P., and Brosch G. Biochemistry 43 (2004) 10834
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(2004)
Biochemistry
, vol.43
, pp. 10834
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Trojer, P.1
Dangl, M.2
Bauer, I.3
Graessle, S.4
Loidl, P.5
Brosch, G.6
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34347375967
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note
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Purity and identity of the compounds was assessed by NMR, IR, mass spectrometry and elemental analyses (not shown). The synthesis of (R,S)-N-(3-aminopropyl)-2-sulfanylpropionic acid amide 4 and corresponding analytical data have been described by R. Ortmann, Ph.D. Thesis, University of Marburg, Germany 2001, page 311. The syntheses of (N,N′-ethane-1,2-diyl)di[(R,S)-2-(9-xanthenyl-sulfanyl)propionic acid amide 5, N,N′-(3,6-dioxaoctane-1,8-diyl)-di[(R,S)-2-(9-xanthenylsulfanyl)propionic acid amide 6 and 2-(9-xanthenylsulfanyl)-[N,N-butane-1,4-diyl]propionic acid amide 7 have been described by R. Machmur, Ph.D. Thesis, University of Marburg, Germany 2006, 5 page 182, 6 page 186, 7 page 177, 8 page 242.
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15
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34347368524
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6 The SET7/9 assays are based on the same system. However, hSET7/9 from Biotrend was used as the source of enzyme activity. Biotinylated Histone H3 peptide, aa 1-21 (Upstate), served as a substrate. The incubation with the enyzme was performed at 37 °C for 1 h. The amount of the substrate's turnover was detected by the usage of anti-monomethyl-Histone H3 (Lys4) rabbit IgG (Upstate).
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34347396183
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note
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Compounds 4-8 are chiral compounds and were tested as racemic mixtures. The docking was carried out with all possible stereoisomers, and comparable docking poses were obtained.
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34347403902
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LigandScout, Inteligand, www.inteligand.com, Vienna, Austria.
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