High levels of population structure caused by habitat islands in the malarial vector Anopheles scanloni

Heredity

Volumn 99, Issue 1, 2007, Pages 31-40

  O'Loughlin, S M ^a   Somboon, P ^b   Walton, C ^a  

^a UNIVERSITY OF MANCHESTER   (United Kingdom)

^b Faculty of Medicine Chiang Mai University   (Thailand)

Author keywords

Anopheles dirus; Divergence; Limestone karst; Malaria vectors; Metapopulation

Indexed keywords

MITOCHONDRIAL DNA; RIBOSOME DNA;

DIVERGENCE; GENE FLOW; HABITAT; ISLAND; MALARIA; METAPOPULATION; MITOCHONDRIAL DNA; MOSQUITO; POLYMORPHISM; POPULATION STRUCTURE; VECTOR;

ALLELE; ANIMAL; ANOPHELES; ARTICLE; CLIMATE; DISEASE CARRIER; GENE FLOW; GENETIC POLYMORPHISM; GENETICS; HAPLOTYPE; MALARIA; MITOCHONDRION; PARASITOLOGY; PEDIGREE; POPULATION; THAILAND;

ALLELES; ANIMALS; ANOPHELES; CLIMATE; DNA, MITOCHONDRIAL; DNA, RIBOSOMAL; GENE FLOW; HAPLOTYPES; INSECT VECTORS; MALARIA; MITOCHONDRIA; PEDIGREE; POLYMORPHISM, GENETIC; POPULATION; THAILAND;

ASIA; EURASIA; SOUTHEAST ASIA; THAILAND;

ANOPHELES DIRUS;

EID: 34347332317     PISSN: 0018067X     EISSN: 13652540     Source Type: Journal    
DOI: 10.1038/sj.hdy.6800959     Document Type: Article

References (62)

1. Baimai V (1988). Population cytogenetics of the malaria vector Anopheles leucosphyrus group. Southeast Asian J Trop Med Public Health 19: 667-680.
2. Baimai V, Andre RG, Harrison BA, Kijchalao U, Panthusiri L (1987). Crossing and chromosomal evidence for 2 additional sibling species within the taxon Anopheles-dirus Peyton and Harrison (Diptera, Culicidae) in Thailand. Proc Entomol Soc Washington 89: 157-166.
3. Baimai V, Kijchalao U, Sawadwongporn P, Green CA (1988a). Geographic distribution and biting behaviour of four species of the Anopheles dirus complex (Diptera: Culicidae) in Thailand. Southeast Asian J Trop Med Public Health 19: 151-161.
4. Baimai V, Poopittayasataporn A, Kijchalao U (1988b). Cytological differences and chromosomal rearrangements in 4 members of the Anopheles dirus complex (Diptera, Culicidae). Genome 30: 372-379.
5. Ballard JWO, Whitlock MC (2004). The incomplete natural history of mitochondria. Mol Ecol 13: 729-744.
6. Bandelt HJ, Forster P, Rohl A (1999). Median-joining networks for inferring intraspecific phylogenies. Mol Biol Evol 16: 37-48.
7. Bazin E, Glemin S, Galtier N (2006). Population size does not influence mitochondrial genetic diversity in animals. Science 312: 570-572.
8. Beebe NW, Cooper RD, Foley DH, Ellis JT (2000). Populations of the south-west Pacific malaria vector Anopheles farauti s.s. revealed by ribosomal DNA transcribed spacer polymorphisms. Heredity 84: 244-253.
9. Bird MI, Taylor D, Hunt C (2005). Environments of insular Southeast Asia during the last glacial period: a savanna corridor in Sundaland? Quatern Sci Rev 24: 2228-2242.
10. Campbell P, Schneider CJ, Adnan AM, Zubaid A, Kunz TH (2006). Comparative population structure of Cynopterus fruit bats in peninsular Malaysia and southern Thailand. Mol Ecol 15: 29-47.
11. Catteruccia F, Nolan T, Loukeris TG, Blass C, Savakis C, Kafatos FC et al. (2000). Stable germline transformation of the malaria mosquito Anopheles stephensi. Nature 405: 959-962.
12. Clement M, Posada D, Crandall KA (2000). TCS: a computer program to estimate gene genealogies. Mol Ecol 9: 1657-1659.
13. Collins FH, Kamau L, Ranson HA, Vulule JM (2000). Molecular entomology and prospects for malaria control. Bull World Health Organ 78: 1412-1423.
14. Conn JE, Rosa-Freitas MG, Luz SL, Momen H (1999). Molecular population genetics of the primary neotropical malaria vector Anopheles darlingi using mtDNA. J Am Mosq Control Assoc 15: 468-474.
15. Coyne JA, Orr HA (1998). The evolutionary genetics of speciation. Philos Trans R Soc London B Biol Sci 353: 287-305.
16. de Bruyn M, Nugroho E, Hossain MM, Wilson JC, Mather PB (2005). Phylogeographic evidence for the existence of an ancient biogeographic barrier: the Isthmus of Kra Seaway. Heredity 94: 370-378.
17. De Merida AM, Palmieri M, Yurrita M, Molina A, Molina E, Black WCt (1999). Mitochondrial DNA variation among Anopheles albimanus populations. Am J Trop Med Hyg 61: 230-239.
18. Di Luca M, Boccolini D, Marinucci M, Romi R (2004). Intrapopulation polymorphism in Anopheles messeae (An. maculipennis complex) inferred by molecular analysis. J Med Entomol 41: 582-586.
19. Donnelly MJ, Townson H (2000). Evidence for extensive genetic differentiation among populations of the malaria vector Anopheles arabiensis in Eastern Africa. Insect Mol Biol 9: 357-367.
20. Fairley TL, Renaud TM, Conn JE (2000). Effects of local geographic barriers and latitude on population structure in Anopheles punctipennis (Diptera: Culicidae). J Med Entomol 37: 754-760.
21. Fu YX (1997). Statistical tests of neutrality of mutations against population growth, hitchhiking and background selection. Genetics 147: 915-925.
22. Gentile G, della Torre A, Maegga B, Powell JR, Caccone A (2002). Genetic differentiation in the African malaria vector, Anopheles gambiae s.s., and the problem of taxonomic status. Genetics 161: 1561-1578.
23. Harbach RE (2004). The classification of genus Anopheles (Diptera: Culicidae): a working hypothesis of phylogenetic relationships. Bull Entomol Res 94: 537-553.
24. Hastings A, Harrison S (1994). Metapopulation dynamics and genetics. Annu Rev Ecol Syst 25: 167-188.
25. Hewitt G (2000). The genetic legacy of the Quaternary ice ages. Nature 405: 907-913.
26. Hope G, Kershaw AP, Kaars Svd, Xiangjun S, Liew P-M, Heusser LE et al. (2004). History of vegetation and habitat change in the Austrial-Asian region. Quatern Int 118-119: 103-126.
27. Hughes JB, Round PD, Woodruff DS (2003). The Indochinese-Sundaic faunal transition at the Isthmus of Kra: an analysis of resident forest bird species distributions. J Biogeogr 30: 569-580.
28. Hurt CR (2004). Genetic divergence, population structure and historical demography of rare springsnails (Pyrgulopsis) in the lower Colorado River basin. Mol Ecol 13: 1173-1187.
29. Hutchison DW, Templeton AR (1999). Correlation of pairwise genetic and geographic distance measures: inferring the relative influences of gene flow and drift on the distribution of genetic variability. Evolution 53: 1898-1914.
30. Kuhner MK, Yamato J, Beerli P, Smith L, Rynes E, Walkup E et al. (2005) LAMARC v 2.0. http://evolution.gs.washington.edu/lamarc.html. University of Washington.
31. Lehmann T, Blackston CR, Besansky NJ, Escalante AA, Collins FH, Hawley WA (2000). The Rift Valley complex as a barrier to gene flow for Anopheles gambiae in Kenya: the mtDNA perspective. J Hered 91: 165-168.
32. Mantel N (1967). Detection of disease clustering and a generalized regression approach. Cancer Res 27: 209.
33. Onyabe DY, Conn JE (1999). Intragenomic heterogeneity of a ribosomal DNA spacer (ITS2) varies regionally in the neotropical malaria vector Anopheles nuneztovari (Diptera: Culicidae). Insect Mol Biol 8: 435-442.
34. Ow Yang CK, Sta Maria FL, Wharton RW (1963). Maintenance of a laboratory colony of Anopheles maculatus Theobald by artificial mating. Mosq News 23: 34-35.
35. Penny D (2001). A 40,000 year palynological record from northeast Thailand; implications for biogeography and palaeoenvironmental reconstruction. Palaeogeogr Palaeoclimatol Palaeoecol 171: 97-128.
36. Peyton E (1989). A new classification for the Leucosphyrus group of Anopheles (Cellia). Mosq Systematics 21: 197-205.
37. Poopittayasataporn A, Baimai V (1995). Polytene chromosome relationships of 5 species of the Anopheles dirus complex in Thailand. Genome 38: 426-434.
38. Posada D, Crandall KA (2001). Selecting models of nucleotide substitution: an application to human immunodeficiency virus 1 (HIV-1). Mol Biol Evol 18: 897-906.
39. Posada D, Crandall KA, Templeton AR (2000). GeoDis: a program for the cladistic nested analysis of the geographical distribution of genetic haplotypes. Mol Ecol 9: 487-488.
40. Pramual P, Kuvangkadilok C, Baimai V, Walton C (2005). Phylogeography of the black fly Simulium tani (Diptera: Simuliidae) from Thailand as inferred from mtDNA sequences. Mol Ecol 14: 3989-4001.
41. Rattanarithikul R, Konishi E, Linthicum KJ (1996). Observations on nocturnal biting activity and host preference of anophelines collected in southern Thailand. J Am Mosq Control Assoc 12: 52-57.
42. Rattanarithikul R, Panthusiri P (1994). Illustrated keys to the medically important mosquitoes of Thailand. Southeast Asian J Trop Med Public Health 25: 1-66.
43. Rogers AR, Harpending H (1992). Population growth makes waves in the distribution of pairwise genetic differences. Mol Biol Evol 9: 552-569.
44. Ross TK (1999). Phylogeography and conservation genetics of the Iowa Pleistocene snail. Mol Ecol 8: 1363-1373.
45. Sallum MAM, Peyton EL, Wilkerson RC (2005). Six new species of the Anopheles leucosphyrus group, reinterpretation of An. elegans and vector implications. Med Vet Entomol 19: 158-199.
46. Sambrook J (1989). Molecular Cloning: A Laboratory Manual, 2nd edn. Cold Spring Harbor Laboratory: Cold Spring Harbor, NY.
47. Scanlon JE, Sandhinand U (1965). The distribution and biology of Anopheles balabacensis in Thailand. J Med Entomol 2: 61-69.
48. Sharpe RG, Harbach RE, Butlin RK (2000). Molecular variation and phylogeny of members of the Minimus Group of Anopheles subgenus Cellia (Diptera: Culicidae). System Entomol 25: 263-272.
49. Simon C, Frati F, Beckenbach A, Crespi B, Liu H, Flook P (1994). Evolution, weighting, and phylogenetic utility of mitochondrial gene-sequences and a compilation of conserved polymerase chain-reaction primers. Ann Entomol Soc Am 87: 651-701.
50. Tajima F (1983). Evolutionary relationship of DNA sequences in finite populations. Genetics 105: 437-460.
51. Tajima F (1989). Statistical method for testing the neutral mutation hypothesis by DNA polymorphism. Genetics 123: 585-595.
52. Templeton AR, Crandall KA, Sing CF (1992). A cladistic analysis of phenotypic associations with haplotypes inferred from restriction endonuclease mapping and DNA sequence data. III. Cladogram estimation. Genetics 132: 619-633.
53. Turelli M, Barton NH, Coyne JA (2001). Theory and speciation. Trends Ecol Evol 16: 330-343.
54. Wade MJ, Mccauley DE (1988). Extinction and recolonization - their effects on the genetic differentiation of local-populations. Evolution 42: 995.
55. Walton C, Handley JM, Collins FH, Baimai V, Harbach RE, Deesin V et al. (2001). Genetic population structure and introgression in Anopheles dirus mosquitoes in south-east Asia. Mol Ecol 10: 569-580.
56. Walton C, Handley JM, Kuvangkadilok C, Collins FH, Harbach RE, Baimai V et al. (1999). Identification of five species of the Anopheles dirus complex from Thailand, using allele-specific polymerase chain reaction. Med Vet Entomol 13: 24-32.
57. Walton C, Handley JM, Tun-Lin W, Collins FH, Harbach RE, Baimai V et al. (2000). Population structure and population history of Anopheles dirus mosquitoes in southeast Asia. Mol Biol Evol 17: 962-974.
58. Watterson GA (1975). On the number of segregating sites in genetical models without recombination. Theor Popul Biol 7: 256-276.
59. White JC, Penny D, Kealhofer L, Maloney B (2004). Vegetation changes from the late Pleistocene through the Holocene from three areas of archaeological significance in Thailand. Quatern Int 113: 111-132.
60. Wilkinson RN, Gould DJ, Boonyakanist P, Segal HE (1978). Observations on Anopheles balabacensis (Diptera: Culicidae) in Thailand. J Med Entomol 14: 666-671.
61. Wong T, Hamilton-Smith E, Chape S, Friederich H (2001). Proceedings of the Asia-Pacific Forum on Karst Ecosystems and World Heritage. IUCN: Gland, Switzerland.
62. Woodruff DS (2003). Neogene marine transgressions, palaeogeography and biogeographic transitions on the Thai-Malay Peninsula. J Biogeogr 30: 551-567.