The HMGB1 acidic tail regulates HMGB1 DNA binding specificity by a unique mechanism

Biochemical and Biophysical Research Communications

Volumn 360, Issue 1, 2007, Pages 14-19

  Wang, Qiyu ^a,b   Zeng, Minghui ^a   Wang, Wei ^a   Tang, Jie ^a  

^a INSTITUTE OF BIOPHYSICS   (China)

^b UNIVERSITY OF SCIENCE AND TECHNOLOGY OF CHINA   (China)

Author keywords

C terminal tail; DNA binding specificity; HMGB1

Indexed keywords

HIGH MOBILITY GROUP B1 PROTEIN;

AMINO ACID SEQUENCE; AMINO TERMINAL SEQUENCE; ARTICLE; CARBOXY TERMINAL SEQUENCE; CONTROLLED STUDY; DNA BINDING; GENE MUTATION; GENE SEQUENCE; NONHUMAN; PRIORITY JOURNAL;

BINDING SITES; DNA; HMGB1 PROTEIN; PROTEIN BINDING; SENSITIVITY AND SPECIFICITY; STRUCTURE-ACTIVITY RELATIONSHIP;

EID: 34347258088     PISSN: 0006291X     EISSN: 10902104     Source Type: Journal    
DOI: 10.1016/j.bbrc.2007.05.130     Document Type: Article

References (20)

1. Zayed H., Izsvak Z., Khare D., Heinemann U., and Ivics Z. The DNA-bending protein HMGB1 is a cellular cofactor of sleeping beauty transposition. Nucleic Acids Res. 31 (2003) 2313-2322
2. Melvin V.S., Roemer S.C., Churchill M.E., and Edwards D.P. The C-terminal extension (CTE) of the nuclear hormone receptor DNA binding domain determines interactions and functional response to the HMGB-1/-2 co-regulatory proteins. J. Biol. Chem. 277 (2002) 25115-25124
3. Imamura T., Izumi H., Nagatani G., Ise T., Nomoto M., Iwamoto Y., and Kohno K. Interaction with p53 enhances binding of cisplatin-modified DNA by high mobility group 1 protein. J. Biol. Chem. 276 (2001) 7534-7540
4. Das D., and Scovell W.M. The binding interaction of HMG-1 with the TATA-binding protein/TATA complex. J. Biol. Chem. 276 (2001) 32597-32605
5. Calogero S., Grassi F., Aguzzi A., Voigtlander T., Ferrier P., Ferrari S., and Bianchi M.E. The lack of chromosomal protein Hmg1 does not disrupt cell growth but causes lethal hypoglycaemia in newborn mice. Nat. Genet. 22 (1999) 276-280
6. Hori O., Brett J., Slattery T., Cao R., Zhang J., Chen J.X., Nagashima M., Lundh E.R., Vijay S., Nitecki D., et al. The receptor for advanced glycation end products (RAGE) is a cellular binding site for amphoterin. Mediation of neurite outgrowth and co-expression of rage and amphoterin in the developing nervous system. J. Biol. Chem. 270 (1995) 25752-25761
7. Kokkola R., Andersson A., Mullins G., Ostberg T., Treutiger C.J., Arnold B., Nawroth P., Andersson U., Harris R.A., and Harris H.E. RAGE is the major receptor for the proinflammatory activity of HMGB1 in rodent macrophages. Scand. J. Immunol. 61 (2005) 1-9
8. Yu M., Wang H., Ding A., Golenbock D.T., Latz E., Czura C.J., Fenton M.J., Tracey K.J., and Yang H. HMGB1 signals through toll-like receptor (TLR) 4 and TLR2. Shock 26 (2006) 174-179
9. Lotze M.T., and Tracey K.J. High-mobility group box 1 protein (HMGB1): nuclear weapon in the immune arsenal. Nat. Rev. Immunol. 5 (2005) 331-342
10. Stros M., Stokrova J., and Thomas J.O. DNA looping by the HMG-box domains of HMG1 and modulation of DNA binding by the acidic C-terminal domain. Nucleic Acids Res. 22 (1994) 1044-1051
11. Thomas J.O., and Travers A.A. HMG1 and 2, and related 'architectural' DNA-binding proteins. Trends Biochem. Sci. 26 (2001) 167-174
12. Knapp S., Muller S., Digilio G., Bonaldi T., Bianchi M.E., and Musco G. The long acidic tail of high mobility group box 1 (HMGB1) protein forms an extended and flexible structure that interacts with specific residues within and between the HMG boxes. Biochemistry 43 (2004) 11992-11997
13. Thomsen M.S., Franssen L., Launholt D., Fojan P., and Grasser K.D. Interactions of the basic N-terminal and the acidic C-terminal domains of the maize chromosomal HMGB1 protein. Biochemistry 43 (2004) 8029-8037
14. Ramstein J., Locker D., Bianchi M.E., and Leng M. Domain-domain interactions in high mobility group 1 protein (HMG1). Eur. J. Biochem. 260 (1999) 692-700
15. Hill D.A., and Reeves R. Competition between HMG-I(Y), HMG-1 and histone H1 on four-way junction DNA. Nucleic Acids Res. 25 (1997) 3523-3531
16. Yoon H.W., Kim M.C., Lee S.Y., Hwang I., Bahk J.D., Hong J.C., Ishimi Y., and Cho M.J. Molecular cloning and functional characterization of a cDNA encoding nucleosome assembly protein 1 (NAP-1) from soybean. Mol. Gen. Genet. 249 (1995) 465-473
17. Hall N., Karras M., Raine J.D., Carlton J.M., Kooij T.W., Berriman M., Florens L., Janssen C.S., Pain A., Christophides G.K., James K., Rutherford K., Harris B., Harris D., Churcher C., Quail M.A., Ormond D., Doggett J., Trueman H.E., Mendoza J., Bidwell S.L., Rajandream M.A., Carucci D.J., Yates III J.R., Kafatos F.C., Janse C.J., Barrell B., Turner C.M., Waters A.P., and Sinden R.E. A comprehensive survey of the Plasmodium life cycle by genomic, transcriptomic, and proteomic analyses. Science 307 (2005) 82-86
18. Kawamura A., Koshida S., Hijikata H., Ohbayashi A., Kondoh H., and Takada S. Groucho-associated transcriptional repressor ripply1 is required for proper transition from the presomitic mesoderm to somites. Dev. Cell 9 (2005) 735-744
19. Stott K., Tang G.S., Lee K.B., and Thomas J.O. Structure of a complex of tandem HMG boxes and DNA. J. Mol. Biol. 360 (2006) 90-104
20. Ueda T., Chou H., Kawase T., Shirakawa H., and Yoshida M. Acidic C-tail of HMGB1 is required for its target binding to nucleosome linker DNA and transcription stimulation. Biochemistry 43 (2004) 9901-9908