Optimal internal noise for mammalian circadian oscillator

Chinese Journal of Chemical Physics

Volumn 20, Issue 2, 2007, Pages

  Wang, Zhi Wei ^a,b   Hou, Zhong Huai ^a   Xin, Hou Wen ^a  

^a UNIVERSITY OF SCIENCE AND TECHNOLOGY OF CHINA   (China)

^b TIANJIN UNIVERSITY OF SCIENCE AND TECHNOLOGY   (China)

Author keywords

Chemical langevin equation; Genetic oscillation; Internal noise; Mesoscopic size effect; Stochastic resonance

Indexed keywords

CIRCUIT RESONANCE; DIFFERENTIAL EQUATIONS; MAGNETIC RESONANCE; MAMMALS; STOCHASTIC SYSTEMS; SUPERCONDUCTING MATERIALS;

CHEMICAL LANGEVIN EQUATION; GENETIC OSCILLATION; INTERNAL NOISE; SIZE EFFECTS; STOCHASTIC RESONANCES;

STOCHASTIC MODELS;

EID: 34250749023     PISSN: 16740068     EISSN: None     Source Type: Journal    
DOI: 10.1360/cjcp2007.20(2).119.7     Document Type: Article

References (33)

1. A. Goldbeter, Nature 420, 238 (2002).
2. H. R. Ueda, M. Hagiwara and H. Kitano, J. Theor. Biol. 210, 401 (2001).
3. D. B. Forger and C. S. Peskin, Proc. Natl. Acad. Sci. USA 100, 14806 (2003).
4. S. M. Reppert and D. R. Weaver, Nature 418, 935 (2002).
5. L. Glass and M. C. Mackey, From Clocks to Chaos: The Rhythms of Life, Princeton: Princeton University Press, (1988).
6. P. Smolen, D. A. Baxter and J. H. Byrne, Biophys. J 83, 2349 (2002).
7. N. Preitner, F. Damiola, L. Lopez-Molina, J. Zakany, D. Duboule, U. Albrecht and U. Schibier, Cell 110, 251 (2002).
8. M. B. Elowitz, A. J. Levine, E. D. Siggia and P. S. Swain, Science 297, 1183 (2002).
9. H. H. McAdams, A. Arkin, Proc. Natl. Acad. Sci. USA 94, 814 (1997).
10. J. Paulson, Nature 427, 415 (2004).
11. J. Hasty, D. McMillen, F. Isaacs and J. J. Collins, Nat. Rev. Genet. 2, 268 (2001).
12. R. Bundschuh, F. Hayot and C. Jayaprakash, J. Theo. Biol. 220, 261 (2003).
13. J. Paulsson, O. G. Berg and M. Ehrenberg, Proc. Natl. Acad. Sci. USA 97, 7148 (2000).
14. J. M. G. Vilar, H. Y. Kueh, N. Barkai and S. Leibler, Proc. Natl. Acad. Sci. USA 99, 5988 (2002).
15. T. B. Kepler and T. C. Elston, Biophys. J. 81, 3116 (2001).
16. H. H. McAdams, A. Arkin, Trend Genetics 15, 65 (1999).
17. J. Hasty, J. Pradines, M. Dolnik and J. J. Collins, Proc. Natl. Acad. Sci. USA 97, 2075 (2000).
18. T. S. Gardner, C. R. Cantor and J. J. Collins, Nature 403, 339 (2000).
19. H. Kobayashi, M. Kærn, M. Araki, K. Chung, T. S. Gardner and C. R. Cantor and J. J. Collins, Proc. Natl. Acad. Sci. USA 101, 8414 (2004).
20. M. B. Elowitz and S. Leibler, Nature 403, 335 (2000).
21. O. G. Berg, J. Paulsson and M. Ehrenberg, Biophys. J. 79, 2944 (2000).
22. P. Jung and J. W. Shuai, Europhys. Lett. 56, 29 (2001).
23. J. W. Shuai and P. Jung, Phys. Rev. Lett. 88, 068102 (2002).
24. J. W, Shuai and P. Jung, Proc. Natl. Acad. Sci. USA 100, 506 (2003).
25. Z. H. Hou and H. W. Xin, J. Chem. Phys 119, 11508 (2003).
26. J. Q. Zhang, Z. H. Hou and H. W. Xin, ChemPhysChem 5, 1041 (2004).
27. Z. W. Wang, Z. H. Hou and H. W. Xin, Chem. Phys. Lett. 401, 307 (2005).
28. S. Becker-Weimann, J. Wolf, H. Herzel and A. Kramer, Biophys. J. 87, 3023 (2004).
29. D. T. Gillespie, J. Phys. Chem. 81, 2340 (1977).
30. D. T. Gillespie, J. Chem. Phys. 115, 1716 (2001).
31. D. T. Gillespie, J. Chem. Phys. 113, 297 (2000).
32. P. Hänggi, ChemPhysChem 3, 285 (2002).
33. L. Gammaitoni, P. Hänggi, P. Jung and F. Marchesoni, Rev. Mod. Phys. 70, 223 (1998).