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Volumn 144, Issue 2, 2007, Pages 615-622

Genomes of the symbiotic nitrogen-fixing bacteria of legumes

Author keywords

[No Author keywords available]

Indexed keywords

BACTERIA (MICROORGANISMS);

EID: 34250632806     PISSN: 00320889     EISSN: 15322548     Source Type: Journal    
DOI: 10.1104/pp.107.101634     Document Type: Review
Times cited : (116)

References (69)
  • 1
    • 0037270254 scopus 로고    scopus 로고
    • Transcriptome analysis of Sinorhizobium meliloti during symbiosis
    • Ampe F, Kiss E, Sabourdy F, Batut J (2003) Transcriptome analysis of Sinorhizobium meliloti during symbiosis. Genome Biol 4: R15
    • (2003) Genome Biol , vol.4
    • Ampe, F.1    Kiss, E.2    Sabourdy, F.3    Batut, J.4
  • 2
    • 33846467820 scopus 로고    scopus 로고
    • Global gene expression in the rhizobiallegume symbiosis
    • Barnett MJ, Fisher RF (2006) Global gene expression in the rhizobiallegume symbiosis. Symbiosis 42: 1-24
    • (2006) Symbiosis , vol.42 , pp. 1-24
    • Barnett, M.J.1    Fisher, R.F.2
  • 4
    • 34250656059 scopus 로고    scopus 로고
    • Barnett MJ, Toman CJ, Fisher RF, Long SR (2004) A dual-genome symbiosis chip for coordinate study of signal exchange and development in a prokaryote-host interaction. Proc Natl Acad Sci USA 101: 16636-16641 Barsch A, Patschkowski T, Niehaus K (2004) Comprehensive metabolite profiling of Sinorhizobium meliloti using gas chromatography-mass spectrometry. Funct Integr Genomics 4: 219-230
    • Barnett MJ, Toman CJ, Fisher RF, Long SR (2004) A dual-genome symbiosis chip for coordinate study of signal exchange and development in a prokaryote-host interaction. Proc Natl Acad Sci USA 101: 16636-16641 Barsch A, Patschkowski T, Niehaus K (2004) Comprehensive metabolite profiling of Sinorhizobium meliloti using gas chromatography-mass spectrometry. Funct Integr Genomics 4: 219-230
  • 5
    • 9444254183 scopus 로고    scopus 로고
    • The evolution of chronic infection strategies in the alpha-proteobacteria
    • Batut J, Andersson SG, O'Callaghan D (2004) The evolution of chronic infection strategies in the alpha-proteobacteria. Nat Rev Microbiol 2: 933-945
    • (2004) Nat Rev Microbiol , vol.2 , pp. 933-945
    • Batut, J.1    Andersson, S.G.2    O'Callaghan, D.3
  • 7
    • 10944235924 scopus 로고    scopus 로고
    • Comparative genomic structure of prokaryotes
    • Bentley SD, Parkhill J (2004) Comparative genomic structure of prokaryotes. Annu Rev Genet 38: 771-792
    • (2004) Annu Rev Genet , vol.38 , pp. 771-792
    • Bentley, S.D.1    Parkhill, J.2
  • 10
    • 7744223916 scopus 로고    scopus 로고
    • Transfer of the symbiotic plasmid of Rhizobium etli CFN42 requires cointegration with p42a, which may be mediated by site-specific recombination
    • Brom S, Girard L, Tun-Garrido C, Garcia-de los SA, Bustos P, González V, Romero D (2004) Transfer of the symbiotic plasmid of Rhizobium etli CFN42 requires cointegration with p42a, which may be mediated by site-specific recombination. J Bacteriol 186: 7538-7548
    • (2004) J Bacteriol , vol.186 , pp. 7538-7548
    • Brom, S.1    Girard, L.2    Tun-Garrido, C.3    Garcia-de los, S.A.4    Bustos, P.5    González, V.6    Romero, D.7
  • 12
    • 23744500955 scopus 로고    scopus 로고
    • Transcriptome-based identification of the Sinorhizobium meliloti NodD1 regulon
    • Capela D, Carrere S, Batut J (2005) Transcriptome-based identification of the Sinorhizobium meliloti NodD1 regulon. Appl Environ Microbiol 71: 4910-4913
    • (2005) Appl Environ Microbiol , vol.71 , pp. 4910-4913
    • Capela, D.1    Carrere, S.2    Batut, J.3
  • 13
    • 33645516750 scopus 로고    scopus 로고
    • Sinorhizobium meliloti differentiation during symbiosis with alfalfa: A transcriptomic dissection
    • Capela D, Filipe C, Bobik C, Batut J, Bruand C (2006) Sinorhizobium meliloti differentiation during symbiosis with alfalfa: a transcriptomic dissection. Mol Plant Microbe Interact 19: 363-372
    • (2006) Mol Plant Microbe Interact , vol.19 , pp. 363-372
    • Capela, D.1    Filipe, C.2    Bobik, C.3    Batut, J.4    Bruand, C.5
  • 14
    • 4143050209 scopus 로고    scopus 로고
    • Global changes in transcription orchestrate metabolic differentiation during symbiotic nitrogen fixation in Lotus japonicus
    • Colebatch G, Desbrosses G, Ott T, Krusell L, Montanari O, Kloska S, Kopka J, Udvardi MK (2004) Global changes in transcription orchestrate metabolic differentiation during symbiotic nitrogen fixation in Lotus japonicus. Plant J 39: 487-512
    • (2004) Plant J , vol.39 , pp. 487-512
    • Colebatch, G.1    Desbrosses, G.2    Ott, T.3    Krusell, L.4    Montanari, O.5    Kloska, S.6    Kopka, J.7    Udvardi, M.K.8
  • 16
    • 3042772563 scopus 로고    scopus 로고
    • Sinorhizobium meliloti metabolism in the root nodule: A proteomic perspective
    • Djordjevic MA (2004) Sinorhizobium meliloti metabolism in the root nodule: a proteomic perspective. Proteomics 4: 1859-1872
    • (2004) Proteomics , vol.4 , pp. 1859-1872
    • Djordjevic, M.A.1
  • 17
    • 33750455848 scopus 로고    scopus 로고
    • Transcriptome profiling reveals the importance of plasmid pSymB for osmoadaptation of Sinorhizobium meliloti
    • Domínguez-Ferreras A, Pérez-Arnedo R, Becker A, Olivares J, Soto MJ, Sanjuán J (2006) Transcriptome profiling reveals the importance of plasmid pSymB for osmoadaptation of Sinorhizobium meliloti. J Bacteriol 188: 7617-7625
    • (2006) J Bacteriol , vol.188 , pp. 7617-7625
    • Domínguez-Ferreras, A.1    Pérez-Arnedo, R.2    Becker, A.3    Olivares, J.4    Soto, M.J.5    Sanjuán, J.6
  • 18
    • 19944422768 scopus 로고    scopus 로고
    • Divided genomes: Negotiating the cell cycle in prokaryotes with multiple chromosomes
    • Egan ES, Fogel MA, Waldor MK (2005) Divided genomes: negotiating the cell cycle in prokaryotes with multiple chromosomes. Mol Microbiol 56: 1129-1138
    • (2005) Mol Microbiol , vol.56 , pp. 1129-1138
    • Egan, E.S.1    Fogel, M.A.2    Waldor, M.K.3
  • 19
    • 0036096902 scopus 로고    scopus 로고
    • Evolving insights: Symbiosis islands and horizontal gene transfer
    • Finan TM (2002) Evolving insights: symbiosis islands and horizontal gene transfer. J Bacteriol 184: 2855-2856
    • (2002) J Bacteriol , vol.184 , pp. 2855-2856
    • Finan, T.M.1
  • 20
    • 0000478937 scopus 로고
    • Complex symbiotic phenotypes result from gluconeogenic mutations in Rhizobium meliloti
    • Finan TM, McWhinnie E, Driscoll B, Watson RJ (1991) Complex symbiotic phenotypes result from gluconeogenic mutations in Rhizobium meliloti. Mol Plant Microbe Interact 4: 386-392
    • (1991) Mol Plant Microbe Interact , vol.4 , pp. 386-392
    • Finan, T.M.1    McWhinnie, E.2    Driscoll, B.3    Watson, R.J.4
  • 22
    • 0023506420 scopus 로고    scopus 로고
    • Flores M, González V, Brom S, Martínez E, Piñero D, Romero D, Dávila G, Palacios R (1987) Reiterated DNA sequences in Rhizobium and Agrobacterium. J Bacteriol 169: 578225788
    • Flores M, González V, Brom S, Martínez E, Piñero D, Romero D, Dávila G, Palacios R (1987) Reiterated DNA sequences in Rhizobium and Agrobacterium. J Bacteriol 169: 578225788
  • 27
    • 24944572678 scopus 로고    scopus 로고
    • Modulation of plant ethylene levels by the bacterial enzyme ACC deaminase
    • Glick BR (2005) Modulation of plant ethylene levels by the bacterial enzyme ACC deaminase. FEMS Microbiol Lett 251: 1-7
    • (2005) FEMS Microbiol Lett , vol.251 , pp. 1-7
    • Glick, B.R.1
  • 30
    • 0035143664 scopus 로고    scopus 로고
    • Potential symbiosis-specific genes uncovered by sequencing a 410-kilobase DNA region of the Bradyrhizobium japonicum chromosome
    • Göttfert M, Röthlisberger S, Kündig C, Beck C, Marty R, Hennecke H (2001) Potential symbiosis-specific genes uncovered by sequencing a 410-kilobase DNA region of the Bradyrhizobium japonicum chromosome. J Bacteriol 183: 1405-1412
    • (2001) J Bacteriol , vol.183 , pp. 1405-1412
    • Göttfert, M.1    Röthlisberger, S.2    Kündig, C.3    Beck, C.4    Marty, R.5    Hennecke, H.6
  • 32
    • 30044443666 scopus 로고    scopus 로고
    • Design and validation of a partial-genome microarray for transcriptional profiling of the Bradyrhizobium japonicum symbiotic gene region
    • Hauser F, Lindemann A, Vuilleumier S, Patrignani A, Schlapbach R, Fischer HM, Hennecke H (2006) Design and validation of a partial-genome microarray for transcriptional profiling of the Bradyrhizobium japonicum symbiotic gene region. Mol Genet Genomics 275: 55-67
    • (2006) Mol Genet Genomics , vol.275 , pp. 55-67
    • Hauser, F.1    Lindemann, A.2    Vuilleumier, S.3    Patrignani, A.4    Schlapbach, R.5    Fischer, H.M.6    Hennecke, H.7
  • 33
    • 27744551607 scopus 로고    scopus 로고
    • Characterization of bacteroid proteins in soybean nodules formed with Bradyrhizobium japonicum USDA110
    • Hoa LT, Nomura M, Tajima S (2004) Characterization of bacteroid proteins in soybean nodules formed with Bradyrhizobium japonicum USDA110. Microbes Environ 19: 71-75
    • (2004) Microbes Environ , vol.19 , pp. 71-75
    • Hoa, L.T.1    Nomura, M.2    Tajima, S.3
  • 38
    • 4544275338 scopus 로고    scopus 로고
    • Global transcriptional analysis of the phosphate starvation response in Sinorhizobium meliloti strains 1021 and 2011
    • Krol E, Becker A (2004) Global transcriptional analysis of the phosphate starvation response in Sinorhizobium meliloti strains 1021 and 2011. Mol Genet Genomics 272: 1-17
    • (2004) Mol Genet Genomics , vol.272 , pp. 1-17
    • Krol, E.1    Becker, A.2
  • 40
    • 21144455250 scopus 로고    scopus 로고
    • Two new Sinorhizobium meliloti LysR-type transcriptional regulators required for nodulation
    • Luo L, Yao SY, Becker A, Rüberg S, Yu GQ, Zhu JB, Cheng HP (2005) Two new Sinorhizobium meliloti LysR-type transcriptional regulators required for nodulation. J Bacteriol 187: 4562-4572
    • (2005) J Bacteriol , vol.187 , pp. 4562-4572
    • Luo, L.1    Yao, S.Y.2    Becker, A.3    Rüberg, S.4    Yu, G.Q.5    Zhu, J.B.6    Cheng, H.P.7
  • 41
    • 8144224427 scopus 로고    scopus 로고
    • Expression of an exogenous 1-aminocyclopropane-1-carboxylate deaminase gene in Sinorhizobium meliloti increases its ability to nodulate alfalfa
    • Ma W, Charles TC, Glick BR (2004) Expression of an exogenous 1-aminocyclopropane-1-carboxylate deaminase gene in Sinorhizobium meliloti increases its ability to nodulate alfalfa. Appl Environ Microbiol 70: 5891-5897
    • (2004) Appl Environ Microbiol , vol.70 , pp. 5891-5897
    • Ma, W.1    Charles, T.C.2    Glick, B.R.3
  • 44
    • 0033846005 scopus 로고    scopus 로고
    • Proteome analysis of differentially displayed proteins as a tool for the investigation of symbiosis
    • Natera SH, Guerreiro N, Djordjevic MA (2000) Proteome analysis of differentially displayed proteins as a tool for the investigation of symbiosis. Mol Plant Microbe Interact 13: 995-1009
    • (2000) Mol Plant Microbe Interact , vol.13 , pp. 995-1009
    • Natera, S.H.1    Guerreiro, N.2    Djordjevic, M.A.3
  • 46
    • 0033007415 scopus 로고    scopus 로고
    • Bacterial genes induced within the nodule during the Rhizobium-legume symbiosis
    • Oke V, Long SR (1999) Bacterial genes induced within the nodule during the Rhizobium-legume symbiosis. Mol Microbiol 32: 837-849
    • (1999) Mol Microbiol , vol.32 , pp. 837-849
    • Oke, V.1    Long, S.R.2
  • 49
    • 0032922202 scopus 로고    scopus 로고
    • High-resolution transcriptional analysis of the symbiotic plasmid of Rhizobium sp. NGR234
    • Perret X, Freiberg C, Rosenthal A, Broughton WJ, Fellay R (1999) High-resolution transcriptional analysis of the symbiotic plasmid of Rhizobium sp. NGR234. Mol Microbiol 32: 415-425
    • (1999) Mol Microbiol , vol.32 , pp. 415-425
    • Perret, X.1    Freiberg, C.2    Rosenthal, A.3    Broughton, W.J.4    Fellay, R.5
  • 51
    • 0028002041 scopus 로고
    • Symbiotic plasmid transfer in Rhizobium leguminosarum biovar trifolii and competition between the inoculant strain ICMP2163 and transconjugant soil bacteria
    • Rao JR, Fenton M, Jarvis BDW (1994) Symbiotic plasmid transfer in Rhizobium leguminosarum biovar trifolii and competition between the inoculant strain ICMP2163 and transconjugant soil bacteria. Soil Biol Biochem 26: 339-351
    • (1994) Soil Biol Biochem , vol.26 , pp. 339-351
    • Rao, J.R.1    Fenton, M.2    Jarvis, B.D.W.3
  • 52
    • 0031468083 scopus 로고    scopus 로고
    • Gene amplification and genomic plasticity in prokaryotes
    • Romero D, Palacios R (1997) Gene amplification and genomic plasticity in prokaryotes. Annu Rev Genet 31: 91-111
    • (1997) Annu Rev Genet , vol.31 , pp. 91-111
    • Romero, D.1    Palacios, R.2
  • 53
    • 0345359590 scopus 로고    scopus 로고
    • Construction and validation of a Sinorhizobium meliloti whole genome DNA microarray: Genome-wide profiling of osmoadaptive gene expression
    • Rüberg S, Tian ZX, Krol E, Linke B, Meyer F, Wang Y, Pühler A, Weidner S, Becker A (2003) Construction and validation of a Sinorhizobium meliloti whole genome DNA microarray: genome-wide profiling of osmoadaptive gene expression. J Biotechnol 106: 255-268
    • (2003) J Biotechnol , vol.106 , pp. 255-268
    • Rüberg, S.1    Tian, Z.X.2    Krol, E.3    Linke, B.4    Meyer, F.5    Wang, Y.6    Pühler, A.7    Weidner, S.8    Becker, A.9
  • 54
    • 30844432187 scopus 로고    scopus 로고
    • The iron control element, acting in positive and negative control of iron-regulated Bradyrhizobium japonicum genes, is a target for the Irr protein
    • Rudolph G, Semini G, Hauser F, Lindemann A, Friberg M, Hennecke H, Fischer H (2006) The iron control element, acting in positive and negative control of iron-regulated Bradyrhizobium japonicum genes, is a target for the Irr protein. J Bacteriol 188: 733-744
    • (2006) J Bacteriol , vol.188 , pp. 733-744
    • Rudolph, G.1    Semini, G.2    Hauser, F.3    Lindemann, A.4    Friberg, M.5    Hennecke, H.6    Fischer, H.7
  • 55
    • 27744579098 scopus 로고    scopus 로고
    • Global protein expression pattern of Bradyrhizobium japonicum bacteroids: A prelude to functional proteomics
    • Sarma AD, Emerich DW (2005) Global protein expression pattern of Bradyrhizobium japonicum bacteroids: a prelude to functional proteomics. Proteomics 5: 4170-4184
    • (2005) Proteomics , vol.5 , pp. 4170-4184
    • Sarma, A.D.1    Emerich, D.W.2
  • 56
    • 33744477353 scopus 로고    scopus 로고
    • A comparative proteomic evaluation of culture grown vs nodule isolated Bradyrhizobium japonicum
    • Sarma AD, Emerich DW (2006) A comparative proteomic evaluation of culture grown vs nodule isolated Bradyrhizobium japonicum. Proteomics 6: 3008-3028
    • (2006) Proteomics , vol.6 , pp. 3008-3028
    • Sarma, A.D.1    Emerich, D.W.2
  • 58
    • 33646570498 scopus 로고    scopus 로고
    • Sequence analysis of the 144-kilobase accessory plasmid pSmeSM11a, isolated from a dominant Sinorhizobium meliloti strain identified during a long-term field release experiment
    • Stiens M, Schneiker S, Keller M, Kuhn S, Pühler A, Schlüter A (2006) Sequence analysis of the 144-kilobase accessory plasmid pSmeSM11a, isolated from a dominant Sinorhizobium meliloti strain identified during a long-term field release experiment. Appl Environ Microbiol 72: 3662-3672
    • (2006) Appl Environ Microbiol , vol.72 , pp. 3662-3672
    • Stiens, M.1    Schneiker, S.2    Keller, M.3    Kuhn, S.4    Pühler, A.5    Schlüter, A.6
  • 59
    • 0032574728 scopus 로고    scopus 로고
    • Evolution of rhizobia by acquisition of a 500-kb symbiosis island that integrates into a phe-tRNA gene
    • Sullivan JT, Ronson CW (1998) Evolution of rhizobia by acquisition of a 500-kb symbiosis island that integrates into a phe-tRNA gene. Proc Natl Acad Sci USA 95: 5145-5149
    • (1998) Proc Natl Acad Sci USA , vol.95 , pp. 5145-5149
    • Sullivan, J.T.1    Ronson, C.W.2
  • 61
    • 4544312317 scopus 로고    scopus 로고
    • The genome of alpha-proteobacteria: Complexity, reduction, diversity and fluidity
    • Teyssier C, Marchandin H, Jumas-Bilak E (2004) The genome of alpha-proteobacteria: complexity, reduction, diversity and fluidity. Can J Microbiol 50: 383-396
    • (2004) Can J Microbiol , vol.50 , pp. 383-396
    • Teyssier, C.1    Marchandin, H.2    Jumas-Bilak, E.3
  • 62
    • 0036790952 scopus 로고    scopus 로고
    • Comparative genome analysis of the alpha-proteobacteria: Relationships between plant and animal pathogens and host specificity
    • Tsolis RM (2002) Comparative genome analysis of the alpha-proteobacteria: relationships between plant and animal pathogens and host specificity. Proc Natl Acad Sci USA 99: 12503-12505
    • (2002) Proc Natl Acad Sci USA , vol.99 , pp. 12503-12505
    • Tsolis, R.M.1
  • 64
    • 0034577812 scopus 로고    scopus 로고
    • Genetic snapshots of the Rhizobium species NGR234 genome
    • RESEARCH0014
    • Viprey V, Rosenthal A, Broughton WJ, Perret X (2000) Genetic snapshots of the Rhizobium species NGR234 genome. Genome Biol 1: RESEARCH0014
    • (2000) Genome Biol , vol.1
    • Viprey, V.1    Rosenthal, A.2    Broughton, W.J.3    Perret, X.4
  • 65
    • 33645322140 scopus 로고    scopus 로고
    • Bradyrhizobium japonicum senses iron through the status of haem to regulate iron homeostasis and metabolism
    • Yang J, Sangwan I, Lindemann A, Hauser F, Hennecke H, Fischer H, O'Brian MR (2006a) Bradyrhizobium japonicum senses iron through the status of haem to regulate iron homeostasis and metabolism. Mol Microbiol 60: 427-437
    • (2006) Mol Microbiol , vol.60 , pp. 427-437
    • Yang, J.1    Sangwan, I.2    Lindemann, A.3    Hauser, F.4    Hennecke, H.5    Fischer, H.6    O'Brian, M.R.7
  • 66
    • 33750615543 scopus 로고    scopus 로고
    • The Bradyrhizobium japonicum Fur protein is an iron-responsive regulator in vivo
    • Yang J, Sangwan I, O'Brian MR (2006b) The Bradyrhizobium japonicum Fur protein is an iron-responsive regulator in vivo. Mol Genet Genomics 276: 555-564
    • (2006) Mol Genet Genomics , vol.276 , pp. 555-564
    • Yang, J.1    Sangwan, I.2    O'Brian, M.R.3
  • 68
    • 33744797980 scopus 로고    scopus 로고
    • Genome prediction of PhoB regulated promoters in Sinorhizobium meliloti and twelve proteo-bacteria
    • Yuan ZC, Zaheer R, Morton R, Finan TM (2006) Genome prediction of PhoB regulated promoters in Sinorhizobium meliloti and twelve proteo-bacteria. Nucleic Acids Res 34: 2686-2697
    • (2006) Nucleic Acids Res , vol.34 , pp. 2686-2697
    • Yuan, Z.C.1    Zaheer, R.2    Morton, R.3    Finan, T.M.4
  • 69
    • 33646111710 scopus 로고    scopus 로고
    • Identification of Sinorhizobium meliloti early symbiotic genes by use of a positive functional screen
    • Zhang X, Cheng H (2006) Identification of Sinorhizobium meliloti early symbiotic genes by use of a positive functional screen. Appl Environ Microbiol 72: 2738-2748
    • (2006) Appl Environ Microbiol , vol.72 , pp. 2738-2748
    • Zhang, X.1    Cheng, H.2


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