Suppression of damping-off of cucumber caused by Pythium ultimum with live cells and extracts of Serratia marcescens N4-5

Soil Biology and Biochemistry

Volumn 39, Issue 9, 2007, Pages 2275-2288

  Roberts, D P ^a   McKenna, L F ^a   Lakshman, D K ^a   Meyer, S L F ^a   Kong, H ^a   de Souza, J T ^b   Lydon, J ^a   Baker, C J ^a   Buyer, J S ^a   Chung, S ^c  

^a AGRICULTURAL RESEARCH SERVICE   (United States)

^b UNIVERSITY OF MARYLAND   (United States)

^c Yeungnam University   (South Korea)

Author keywords

Biological control; Cucumber; Damping off; Meloidogyne incognita; Prodigiosin; Pythium ultimum; Seed treatments; Serratia marcescens

Indexed keywords

ANTIBIOTICS; CELLS; ETHANOL; GROWTH KINETICS; PATHOGENS; SURFACE ACTIVE AGENTS;

BIOLOGICAL CONTROL; CUCUMBER; MELOIDOGYNE INCOGNITA; PYTHIUM ULTIMUM; SEED TREATMENTS; SERRATIA MARCESCENS;

MICROBIOLOGY;

BACTERIUM; BIOLOGICAL CONTROL; DAMPING-OFF; DICOTYLEDON; FUNGUS; SEED TREATMENT; SURFACTANT;

BACTERIA (MICROORGANISMS); CUCUMIS MELO; CUCUMIS SATIVUS; MELOIDOGYNE INCOGNITA; PYTHIUM; PYTHIUM ULTIMUM; SERRATIA MARCESCENS;

EID: 34250216704     PISSN: 00380717     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.soilbio.2007.03.029     Document Type: Article

References (73)

1. Altschul S.F., Madden T.L., Schaffer A.A., Zhang J., Miller W., and Lipman D.J. Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. Nucleic Acids Research 25 (1997) 3389-3402
2. Asano S., Ogiwara K., Nakagawa Y., Suzuki K., Hori H., and Watanabe T. Prodigiosin produced by Serratia marcescens enhances the insecticidal activity of Bacillus thuringiensis delta-endotoxin (Cry1C) against common cutworm, Spodoptera litura. Journal of Pesticide Science 24 (1999) 381-385
3. Aucken H.M., and Pitt T.L. Antibiotic resistance and putative virulence factors of Serratia marcescens with respect to O and K serotypes. Journal of Medical Microbiology 47 (1998) 1105-1113
4. Ayers W.A., and Lumsden R.D. Factors affecting production and germination of oospores of three Pythium species. Phytopathology 65 (1975) 1094-1100
5. Baker R. An overview of current and future strategies and models for biological control. In: Hornby D. (Ed). Biological Control of Soil-borne Plant Pathogens (1990), CAB International, Wallingford, UK 375-388
6. Bu'Lock J.D. Intermediary metabolism and antibiotic synthesis. Annual Review of Microbiology 3 (1961) 293-342
7. Burger S.R., and Bennett J.W. Droplet enrichment factors of pigmented and nonpigmented Serratia marcescens: possible selective function for prodigiosin. Applied & Environmental Microbiology 50 (1985) 487-490
8. Cang S., Sanada M., Johdo O., Nagamatsu Y., and Yoshimoto A. High production of prodigiosin by Serratia marcescens grown on ethanol. Biotechnology Letters 22 (2000) 1761-1765
9. Carlton B.C., and Brown B.J. Gene mutation. In: Gerhardt P., Murray R.G.E., Costilow R.N., Nester E.W., Wood W.A., Krieg N.R., and Phillips G.B. (Eds). Manual of Methods for General Bacteriology (1981), American Society for Microbiology Press, Washington, DC 222-242
10. Chavira R., Burnett T.J., and Hageman J.H. Assaying proteinases with azocoll. Analytical Biochemistry 136 (1984) 446-450
11. Chernin L., Brandis A., Ismailov Z., and Chet I. Pyrrolnitrin production by an Enterobacter agglomerans strain with a broad spectrum of antagonistic activity towards fungal and bacterial phytopathogens. Current Microbiology 32 (1996) 208-212
12. Chiarini L., Bevivino A., Dalmastri C., Tabacchioni S., and Visca P. Burkholderia cepacia complex species: health hazards and biotechnological potential. Trends in Microbiology 14 (2006) 277-286
13. Crump D.H. Biological control of potato and beet cyst nematodes. Aspects of Applied Biology 53 (1998) 383-386
14. Demain A.L. Why do microorganisms produce antimicrobials?. In: Hunter P.A., Darby G.K., and Russel N.J. (Eds). Fifty Years of Antimicrobials: Past Perspectives and Future Trends (1995), Society for General Microbiology, Symposium 53, Cambridge, UK 205-228
15. de Souza J.T., and Raaijmakers J.M. Polymorphisms within the prnD and pltC genes from pyrrolnitrin and pyoluteroin-producing Pseudomonas and Burkholderia spp. FEMS Microbiology Ecology 43 (2003) 21-34
16. de Souza J.T., Mazzola M., and Raaijmakers J.M. Conservation of the response regulator gene gacA in Pseudomonas species. Environmental Microbiology 5 (2003) 1328-1340
17. Ding M.-J., and Williams R.P. Biosynthesis of prodigiosin by white strains of Serratia marcescens isolated from patients. Journal of Clinical Microbiology 17 (1983) 476-480
18. Esikova T.Z., Temirov Y.V., Sokolov S.L., and Alakhov Y.B. Secondary antimicrobial metabolites produced by the thermophilic Bacillus strains VK2 and VK21. Applied Biochemistry & Microbiology 38 (2002) 226-231
19. 2 by a synthetic prodigiosin mimic. Chemical Communications 30 (2005) 3773-3775
20. Grimont, F., Grimont, P.A.D., 1992. The genus Serratia. In: Ballows, A. (Ed.), The Prokaryotes-A Handbook on the Biology of Bacteria: Ecophysiology, Isolation, Identification, Applications, second ed., vol. III. Springer, New York, NY, pp. 2823-2848.
21. Hadar Y., Harman G.E., Taylor A.G., and Horton J.E. Effects of pregermination of pea and cucumber seeds and of seed treatment with Enterobacter cloacae on rots caused by Pythium spp. Phytopathology 73 (1983) 1322-1325
22. Hebbar K.P., Atkinson D., Tucker W., and Dart P.J. Suppression of Fusarium monilforme by maize root-associated Pseudomonas cepacia. Soil Biology & Biochemistry 24 (1992) 1009-1020
23. Hejazi A., and Falkiner F.R. Serratia marcescens. Journal of Medical Microbiology 46 (1997) 903-912
24. Hood D.W., Heidstra R., Swoboda U.K., and Hodgson D.A. Molecular genetic analysis of proline and tryptophan biosynthesis in Streptomyces coelicolor A3(2): interaction between primary and secondary metabolism-a review. Gene 115 (1992) 5-12
25. Jain D.K., Collins-Thompson D.L., Lee H., and Trevors J.T. A drop-collapsing test for screening surfactant-producing organisms. Journal of Microbiology Methods 13 (1991) 271-279
26. Janisiewicz W. Ecological diversity, niche overlap, and coexistence of antagonists used in developing mixtures for biocontrol of postharvest diseases of apples. Phytopathology 86 (1996) 473-479
27. Janisiewicz W., and Bors B. Development of a microbial community of bacterial and yeast antagonists to control wound-invading postharvest pathogens of fruits. Applied & Environmental Microbiology 61 (1995) 3261-3267
28. Kamensky M., Ovadis M., Chet I., and Chernin L. Soil-borne strain IC14 of Serratia plymuthica with multiple mechanisms of antifungal activity provides biocontrol of Botrytis cinerea and Sclerotinia sclerotiorum diseases. Soil Biology & Biochemistry 35 (2003) 323-331
29. Kilbane J.J., Chatterjee D.K., Karns J.S., Kellogg S.T., and Chakrabarty A.M. Biodegradation of 2,4,5-trichlorophenoxyacetic acid by a pure culture of Pseudomonas cepacia. Applied & Environmental Microbiology 44 (1982) 72-78
30. Kobayashi D.Y., and El-Barrad N. Selection of bacterial antagonists using enrichment cultures for the control of summer patch disease in Kentucky Bluegrass. Current Microbiology 32 (1996) 106-111
31. Koening S.C., Overstreet C., Noling J.M., Donald P.A., Becker J.O., and Fortnum B.A. Survey of crop losses in response to phytoparasitic nematodes in the United States for 1994. Journal of Nematology (Supplement) 31 4S (1999) 587-618
32. Larkin R.P., Roberts D.P., and Gracia-Garza J.A. Biological control of fungal diseases. In: Hutson D., and Miyamoto J. (Eds). Fungicidal Activity-Chemical and Biological Approaches to Plant Protection (1998), Wiley, New York, NY 141-191
33. Lemanceau P., and Alabouvette C. Biological control of Fusarium diseases by fluorescent Pseudomonas and non-pathogenic Fusarium. Crop Protection 10 (1991) 279-286
34. Lemanceau P., Bakker P.A.H.M., de Kogel W.J., Alabouvette C., and Schippers B. Effect of pseudobactin 358 production by Pseudomonas putida on suppression of Fusarium wilt of carnations by nonpathogenic Fusarium oxysporum Fo47. Applied & Environmental Microbiology 58 (1993) 2978-2982
35. Li H., Tanikawa T., Sato Y., Nakagawa, and Matsuyama T. Serratia marcescens gene required for surfactant serrawettin W1 production encodes putative aminolipid synthetase belonging to nonribosomal peptide synthetase family. Microbiology & Immunology 49 (2005) 303-310
36. Li W., Roberts D.P., Dery P.D., Meyer S.L.F., Lohrke S., Lumsden R.D., and Hebbar K.P. Broad spectrum anti-biotic activity and disease suppression by the potential biocontrol agent Burkholderia ambifaria BC-F. Crop Protection 21 (2002) 129-135
37. Ligon J.M., Hill D.S., Hammer P.E., Torkewitz N.R., Hofmann D., Kempf H.-J., and van Pée K.-H. Natural products with antifungal activity from Pseudomonas biocontrol bacteria. Pest Management Science 56 (2000) 688-695
38. Lindum P.W., Anthoni U., Christophersen C., Eberl L., Molin S., and Givskov M. N-acyl-l-homoserine lactone autoinducers control production of an extracellular lipopeptide biosurfactant required for swarming motility of Serratia liquefaciens MG1. Journal of Bacteriology 180 (1998) 6384-6388
39. Mahoney N.E., and Roitman J.N. High-performance liquid chromatographic analysis of phenylpyrroles produced by Pseudomonas cepacia. Journal of Chromatography 508 (1990) 247-251
40. Mandarville R.A. Synthesis, proton affinity, and anticancer properties of the prodigiosin group of natural products. Current Medicinal Chemistry 1 (2001) 195-218
41. Martin F.N. Development of alternative strategies for management of soilborne plant pathogens currently controlled through methyl bromide. Annual Review of Phytopathology 41 (2003) 325-350
42. Matsuyama T., Fujita M., and Yano I. Wetting agent produced by Serratia marcescens. FEMS Microbiology Letters 28 (1985) 125-129
43. Matsuyama T., Murakami T., Fujita M., Fujita S., and Yano I. Extracellular vesicle formation and biosurfactant production by Serratia marcescens. Journal of General Microbiology 132 (1986) 865-875
44. McGowan S.J., Holden T.G., Bycroft B.W., and Salmond G.P.C. Molecular genetics of carbapenem antibiotic biosynthesis. Antonie van Leeuwenhoek 75 (1999) 135-141
45. Meyer S.L.F., and Roberts D.P. Combinations of biocontrol agents for management of plant-parasitic nematodes and soilborne plant-pathogenic fungi. Journal of Nematology 34 (2002) 1-8
46. Miller J.H. Experiments in Molecular Genetics (1972), Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY 466pp
47. Nelson E.B., Chao W.L., Norton J.M., Nash G.T., and Harman G.E. Attachment of Enterobacter cloacae to hyphae of Pythium ultimum: possible role in the biological control of Pythium preemergence damping-off. Phytopathology 76 (1986) 327-335
48. Nelson N. A photometric adaptation of the Somogyi method for determination of glucose. Journal of Biological Chemistry 153 (1944) 375-380
49. Osburn R.M., Schroth M.N., Hancock J.G., and Hendon M. Dynamics of sugar beet seed colonization by Pythium ultimum and Pseudomonas species: effects on seed rot and damping off. Phytopathology 79 (1989) 709-716
50. Parke J.L., Rand R.E., Joy A.E., and King E.B. Biological control of Pythium damping-off and Aphanomyces root rot of peas by application of Pseudomonas cepacia or Pseudomonas fluorescens to seed. Plant Disease 75 (1991) 987-992
51. Pierson E.A., and Weller D.M. Use of mixtures of fluorescent pseudomonads to suppress take-all and improve the growth of wheat. Phytopathology 84 (1994) 940-947
52. Press C., Wilson M., Tuzun S., and Kloepper J.W. Salicylic acid produced by Serratia marcescens 90-166 is not the primary determinant of induced systemic resistance in cucumber or tobacco. Molecular Plant-Microbe Interactions 10 (1997) 761-768
53. Raupach G.S., and Kloepper J.W. Mixtures of plant growth-promoting rhizobacteria enhance biological control of multiple cucumber pathogens. Phytopathology 88 (1998) 1158-1164
54. Reissig J.L., Strominger J.L., and Leloir L.F. A modified colorimetric method for estimation of N-acetylamine sugars. Journal of Biological Chemistry 217 (1955) 959-966
55. Roberts D.P., and Lumsden R.D. Effect of extracellular metabolites from Gliocladium virens on germination of sporangia and mycelial growth of Pythium ultimum. Phytopathology 80 (1990) 461-465
56. Roberts D.P., Dery P.D., Hebbar P.K., Mao W., and Lumsden R.D. Biological control of damping-off of cucumber caused by Pythium ultimum with a root-colonization-deficient strain of Escherichia coli. Journal of Phytopathology 145 (1997) 383-388
57. Roberts D.P., Lohrke S.M., Meyer S.L.F., Buyer J.S., Bowers J.H., Baker C.J., Li W., de Souza J.T., Lewis J.A., and Chung S. Biocontrol agents applied individually and in combination for suppression of soilborne diseases of cucumber. Crop Protection 24 (2005) 135-141
58. Sambrook J., and Russell D.W. Molecular Cloning. A Laboratory Manual (2001), Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY
59. Shields M., and Reagin J.M. Selection of a Pseudomonas cepacia strain constitutive for the degradation of trichloroethylene. Applied & Environmental Microbiology 58 (1992) 3977-3983
60. Shields M.S., Montgomery S.O., Cuskey S.M., Chapman P.J., and Pritchard P.H. Mutants of Pseudomonas cepacia G4 defective in catabolism of aromatic compounds and trichloroethylene. Applied & Environmental Microbiology 57 (1991) 1935-1941
61. Someya N., Kataoka N., Komagata T., Hirayae K., and Hibi T. Biological control of cyclamen soilborne diseases by Serratia marcescens strain B2. Plant Disease 84 (2000) 334-340
62. Someya N., Nakajima M., Hirayae K., Hibi T., and Akutsu K. Synergistic antifungal activity of chitinolytic enzymes and prodigiosin produced by biocontrol bacterium, Serratia marcescens strain B2 against gray mold pathogen, Botrytis cinerea. Journal of General Plant Pathology 67 (2001) 312-317
63. Stock I., Grueger T., and Widemann B. Natural antibiotic susceptibility of strains of Serratia marcescens and the S. liquefaciens complex: S. liquefaciens sensu stricto, Sproteamaculans and S. grimesii. International Journal of Antimicrobial Agents 22 (2003) 35-47
64. Strobel G., Li J.Y., Sugawara F., Koshino H., Harper J., and Hess W.M. Oocydin A, a chlorinated macrocyclic lactone with potent anti-oomycete activity from Serratia marcescens. Microbiology 145 (1999) 3557-3564
65. Sunaga S., Li H., Sato Y., Nakagawa Y., and Matsuyama T. Identification and characterization of the pswP gene required for the parallel production of prodigiosin and serrawettin W1 in Serratia marcescens. Microbiology & Immunology 48 (2004) 723-728
66. Traub W.H. Antibiotic susceptibility of Serratia marcescens and Serratia liquefaciens. Chemotherapy 46 (2000) 315-321
67. Tsuji R.F., Magae J., Yamashita M., Nagai K., and Yamasaki M. Immunomodulating properties of prodigiosin 25-C, an antibiotic which preferentially suppresses induction of cytotoxic T cells. Journal of Antibiotics (Tokyo) 45 (1992) 1295-1302
68. Tsuji R.F., Yamamoto M., Nakamura N., Kataoka T., Magae J., Nagai K., and Yamasaki M. Selective immunosuppression of prodigiosin 25-C and FK506 in the murine immune system. Journal of Antibiotics (Tokyo) 43 (1990) 1293-1301
69. Vega D., Cooke R., and Marty J.-L. Relationship between phenyl carbamate degradation and plasmid in two strains of Pseudomonas. FEMS Microbiology Letters 49 (1988) 199-202
70. Whipps J.M. Microbial interactions and biocontrol in the rhizosphere. Journal of Experimental Botany 52 (2001) 487-511
71. Williams R.P., and Quadri S.M.. The pigments of Serratia. In: Von Graevenitz A., and Rubin S.J. (Eds). The Genus Serratia (1980), CRC Press, Boca Raton, FL 31-75
72. Williamson N.R., Simonsen H.T., Ahmed R.A.A., Goldet G., Slater H., Woodley L., Leeper F.J., and Salmond G.P.C. Biosynthesis of the red antibiotic, prodigiosin, in Serratia: identification of a novel 2-methyl-3-n-amylpyrrole (MAP) assembly pathway, definition of the terminal condensing enzyme, and implications for undecylprodigiosin biosynthesis in Streptomyces. Molecular Microbiology 56 (2005) 971-989
73. Zitter T.A., Hopkins D.L., and Thomas C.E. Compendium of Cucurbit Diseases (1996), The American Phytopathological Society Press, St. Paul, MN 87pp