메뉴 건너뛰기




Volumn 25, Issue 6, 2007, Pages 651-655

Improving the success rate of proteome analysis by modeling protein-abundance distributions and experimental designs

Author keywords

[No Author keywords available]

Indexed keywords

BIOMARKERS; COMPUTER SIMULATION; IDENTIFICATION (CONTROL SYSTEMS); MASS SPECTROMETRY;

EID: 34250216392     PISSN: 10870156     EISSN: 15461696     Source Type: Journal    
DOI: 10.1038/nbt1315     Document Type: Article
Times cited : (64)

References (12)
  • 1
    • 0142215475 scopus 로고    scopus 로고
    • Global analysis of protein expression in yeast
    • Ghaemmaghami, S. et al. Global analysis of protein expression in yeast. Nature 425, 737-741 (2003).
    • (2003) Nature , vol.425 , pp. 737-741
    • Ghaemmaghami, S.1
  • 2
    • 0001644020 scopus 로고    scopus 로고
    • The human plasma proteome: History, character, and diagnostic prospects
    • Anderson, N.L. & Anderson, N.G. The human plasma proteome: history, character, and diagnostic prospects. Mol. Cell. Proteomics 1, 845-867 (2002).
    • (2002) Mol. Cell. Proteomics , vol.1 , pp. 845-867
    • Anderson, N.L.1    Anderson, N.G.2
  • 3
    • 0037435030 scopus 로고    scopus 로고
    • Mass spectrometry-based proteomics
    • Aebersold, R. & Mann, M. Mass spectrometry-based proteomics. Nature 422, 198-207 (2003).
    • (2003) Nature , vol.422 , pp. 198-207
    • Aebersold, R.1    Mann, M.2
  • 4
    • 20844461912 scopus 로고    scopus 로고
    • Intact-protein-based high-resolution three-dimensional quantitative analysis system for proteome profiling of biological fluids
    • Wang, H. et al. Intact-protein-based high-resolution three-dimensional quantitative analysis system for proteome profiling of biological fluids. Mol. Cell. Proteomics 4, 618-625 (2005).
    • (2005) Mol. Cell. Proteomics , vol.4 , pp. 618-625
    • Wang, H.1
  • 5
    • 14944338676 scopus 로고    scopus 로고
    • Proteomic LC-MS systems using nanoscale liquid chromatography with tandem mass spectrometry
    • Ishihama, Y. Proteomic LC-MS systems using nanoscale liquid chromatography with tandem mass spectrometry. J. Chromatogr. A. 1067, 73-83 (2005).
    • (2005) J. Chromatogr. A , vol.1067 , pp. 73-83
    • Ishihama, Y.1
  • 6
    • 1242329500 scopus 로고    scopus 로고
    • Gel based isoelectric focusing of peptides and the utility of isoelectric point in protein identification
    • Cargile, B.J., Bundy, J.L., Freeman, T.W. & Stephenson, J.L., Jr. Gel based isoelectric focusing of peptides and the utility of isoelectric point in protein identification. J. Proteome Res. 3, 112-119 (2004).
    • (2004) J. Proteome Res , vol.3 , pp. 112-119
    • Cargile, B.J.1    Bundy, J.L.2    Freeman, T.W.3    Stephenson Jr., J.L.4
  • 7
    • 17244367375 scopus 로고    scopus 로고
    • Tandem mass spectrometry for peptide and protein sequence analysis
    • Coon, J.J., Syka, J.E., Shabanowitz, J. & Hunt, D.F. Tandem mass spectrometry for peptide and protein sequence analysis. Biotechniques 38, 519-523 (2005).
    • (2005) Biotechniques , vol.38 , pp. 519-523
    • Coon, J.J.1    Syka, J.E.2    Shabanowitz, J.3    Hunt, D.F.4
  • 8
    • 0033887451 scopus 로고    scopus 로고
    • Identifying the proteome: Software tools
    • Fenyo, D. Identifying the proteome: software tools. Curr. Opin. Biotechnol. 11, 391-395 (2000).
    • (2000) Curr. Opin. Biotechnol , vol.11 , pp. 391-395
    • Fenyo, D.1
  • 9
    • 13844271209 scopus 로고    scopus 로고
    • Informatics for protein identification by mass spectrometry
    • Johnson, R.S., Davis, M.T., Taylor, J.A. & Patterson, S.D. Informatics for protein identification by mass spectrometry. Methods 35, 223-236 (2005).
    • (2005) Methods , vol.35 , pp. 223-236
    • Johnson, R.S.1    Davis, M.T.2    Taylor, J.A.3    Patterson, S.D.4
  • 10
    • 0034161650 scopus 로고    scopus 로고
    • A statistical basis for testing the significance of mass spectrometric protein identification results
    • Eriksson, J., Chait, B.T. & Fenyo, D. A statistical basis for testing the significance of mass spectrometric protein identification results. Anal. Chem. 72, 999-1005 (2000).
    • (2000) Anal. Chem , vol.72 , pp. 999-1005
    • Eriksson, J.1    Chait, B.T.2    Fenyo, D.3
  • 11
    • 1242307292 scopus 로고    scopus 로고
    • Probity: A protein identification algorithm with accurate assignment of the statistical significance of the results
    • Eriksson, J. & Fenyo, D. Probity: a protein identification algorithm with accurate assignment of the statistical significance of the results. J. Proteome Res. 3, 32-36 (2004).
    • (2004) J. Proteome Res , vol.3 , pp. 32-36
    • Eriksson, J.1    Fenyo, D.2
  • 12
    • 5744223586 scopus 로고    scopus 로고
    • An improved model for prediction of retention times of tryptic peptides in ion pair reversed-phase HPLC: Its application to protein peptide mapping by off-line HPLC-MALDI MS
    • Krokhin, O.V. et al. An improved model for prediction of retention times of tryptic peptides in ion pair reversed-phase HPLC: its application to protein peptide mapping by off-line HPLC-MALDI MS. Mol. Cell. Proteomics 3, 908-919 (2004).
    • (2004) Mol. Cell. Proteomics , vol.3 , pp. 908-919
    • Krokhin, O.V.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.