메뉴 건너뛰기




Volumn 60, Issue 5, 2007, Pages 576-579

In silico analysis of 16S ribosomal RNA gene sequencing-based methods for identification of medically important anaerobic bacteria

Author keywords

[No Author keywords available]

Indexed keywords

RNA 16S;

EID: 34249903335     PISSN: 00219746     EISSN: None     Source Type: Journal    
DOI: 10.1136/jcp.2006.038653     Document Type: Article
Times cited : (16)

References (15)
  • 1
    • 0027505613 scopus 로고    scopus 로고
    • Olsen GJ, Woese CR. Ribosomal RNA: a key to phylogeny. FASEB J 1993;7:113-23.
    • Olsen GJ, Woese CR. Ribosomal RNA: a key to phylogeny. FASEB J 1993;7:113-23.
  • 2
    • 1242314290 scopus 로고    scopus 로고
    • Evaluation of partial 16S ribosomal DNA sequencing for identification of nocardia species by using the MicroSeq 500 system with an expanded database
    • Cloud JL, Conville PS, Croft A, et al. Evaluation of partial 16S ribosomal DNA sequencing for identification of nocardia species by using the MicroSeq 500 system with an expanded database. J Clin Microbiol 2004;42:578-84.
    • (2004) J Clin Microbiol , vol.42 , pp. 578-584
    • Cloud, J.L.1    Conville, P.S.2    Croft, A.3
  • 3
    • 13844297447 scopus 로고    scopus 로고
    • Use of the MicroSeq 500 16S rRNA gene-based sequencing for identification of bacterial isolates that commercial automated systems failed to identify correctly
    • Fontana C, Favaro M, Pelliccioni M, et al. Use of the MicroSeq 500 16S rRNA gene-based sequencing for identification of bacterial isolates that commercial automated systems failed to identify correctly. J Clin Microbiol 2005;43:615-19.
    • (2005) J Clin Microbiol , vol.43 , pp. 615-619
    • Fontana, C.1    Favaro, M.2    Pelliccioni, M.3
  • 4
    • 0033989458 scopus 로고    scopus 로고
    • Sequence-based identification of Mycobacterium species using the MicroSeq 500 16S rDNA bacterial identification system
    • Patel JB, Leonard DG, Pan X, et al. Sequence-based identification of Mycobacterium species using the MicroSeq 500 16S rDNA bacterial identification system. J Clin Microbiol 2000;38:246-51.
    • (2000) J Clin Microbiol , vol.38 , pp. 246-251
    • Patel, J.B.1    Leonard, D.G.2    Pan, X.3
  • 5
    • 0031784307 scopus 로고    scopus 로고
    • Comparison of phenotypic and genotypic technique for identification of unusual aerobic pathogenic Gram-negative bacilli
    • Tang YW, Ellis NM, Hopkins MK, et al. Comparison of phenotypic and genotypic technique for identification of unusual aerobic pathogenic Gram-negative bacilli. J Clin Microbiol 1998;36:3674-9.
    • (1998) J Clin Microbiol , vol.36 , pp. 3674-3679
    • Tang, Y.W.1    Ellis, N.M.2    Hopkins, M.K.3
  • 6
    • 0033997366 scopus 로고    scopus 로고
    • Identification of coryneform bacterial isolates by ribosomal DNA sequence analysis
    • Tang YW, Von Graevenitz A, Waddington MG, et al. Identification of coryneform bacterial isolates by ribosomal DNA sequence analysis. J Clin Microbiol 2000;38:1676-8.
    • (2000) J Clin Microbiol , vol.38 , pp. 1676-1678
    • Tang, Y.W.1    Von Graevenitz, A.2    Waddington, M.G.3
  • 7
    • 0037952695 scopus 로고    scopus 로고
    • Usefulness of the MicroSeq 500 16S ribosomal DNA-based bacterial identification system for identification of clinically significant bacterial isolates with ambiguous biochemical profiles
    • Woo PCY, Ng KHL, Lau SKP, et al. Usefulness of the MicroSeq 500 16S ribosomal DNA-based bacterial identification system for identification of clinically significant bacterial isolates with ambiguous biochemical profiles. J Clin Microbiol 2003;41:1996-2001.
    • (2003) J Clin Microbiol , vol.41 , pp. 1996-2001
    • Woo, P.C.Y.1    Ng, K.H.L.2    Lau, S.K.P.3
  • 8
    • 4143081458 scopus 로고    scopus 로고
    • Eggerthella hongkongensis sp nov and Eggerthella sinensis sp nov, two novel Eggerthella species, account for half of the cases of Eggerthella bacteremia
    • Lau SKP, Woo PCY, Woo GKS, et al. Eggerthella hongkongensis sp nov and Eggerthella sinensis sp nov, two novel Eggerthella species, account for half of the cases of Eggerthella bacteremia. Diagn Microbiol Infect Dis 2004;49:255-63.
    • (2004) Diagn Microbiol Infect Dis , vol.49 , pp. 255-263
    • Lau, S.K.P.1    Woo, P.C.Y.2    Woo, G.K.S.3
  • 9
    • 0036135742 scopus 로고    scopus 로고
    • Identification by 16S ribosomal RNA gene sequencing of Lactobacillus salivarius bacteremic cholecystitis
    • Woo PCY, Fung AMY, Lau SKP, et al. Identification by 16S ribosomal RNA gene sequencing of Lactobacillus salivarius bacteremic cholecystitis. J Clin Microbiol 2002;40:265-7.
    • (2002) J Clin Microbiol , vol.40 , pp. 265-267
    • Woo, P.C.Y.1    Fung, A.M.Y.2    Lau, S.K.P.3
  • 10
    • 0345293373 scopus 로고    scopus 로고
    • Actinomyces hongkongensis sp nov. A novel Actinomyces species isolated from a patient with pelvic actinomycosis
    • Woo PCY, Fung AMY, Lau SKP, et al. Actinomyces hongkongensis sp nov. A novel Actinomyces species isolated from a patient with pelvic actinomycosis. Syst Appl Microbiol 2003;26:518-22.
    • (2003) Syst Appl Microbiol , vol.26 , pp. 518-522
    • Woo, P.C.Y.1    Fung, A.M.Y.2    Lau, S.K.P.3
  • 11
    • 5044232794 scopus 로고    scopus 로고
    • Bacteremia in a patient with colonic carcinoma caused by a
    • Woo PCY, Teng JLL, Leung KW, et al. Bacteremia in a patient with colonic carcinoma caused by a novel Sedimentibacter species: Sedimentibacter hongkongensis sp nov Diagn Microbiol Infect Dis 2004;50:81-7.
    • (2004) Diagn Microbiol Infect Dis , vol.50 , pp. 81-87
    • Woo, P.C.Y.1    Teng, J.L.L.2    Leung, K.W.3
  • 12
    • 15044349638 scopus 로고    scopus 로고
    • Clostridium bacteraemia characterised by 16S ribosomal RNA gene sequencing
    • Woo PCY, Lau SKP, Chan KM, et al. Clostridium bacteraemia characterised by 16S ribosomal RNA gene sequencing. J Clin Pathol 2005;58:301-7.
    • (2005) J Clin Pathol , vol.58 , pp. 301-307
    • Woo, P.C.Y.1    Lau, S.K.P.2    Chan, K.M.3
  • 13
    • 32544458383 scopus 로고    scopus 로고
    • Usefulness of MicroSeq 500 16S rDNA bacterial identification system for identification of anaerobic Gram-positive bacilli isolated from blood cultures
    • Lau SKP, Ng KHL, Woo PCY, et al. Usefulness of MicroSeq 500 16S rDNA bacterial identification system for identification of anaerobic Gram-positive bacilli isolated from blood cultures. J Clin Pathol 2006;59:219-22.
    • (2006) J Clin Pathol , vol.59 , pp. 219-222
    • Lau, S.K.P.1    Ng, K.H.L.2    Woo, P.C.Y.3
  • 15
    • 0027968068 scopus 로고
    • CLUSTAL W: Improving the sensitivity of progressive multiple sequence alignment through sequence weighting position-specific gap penalties and weight matrix choice
    • Thompson JD, Higgins DG, Gibson TJ. CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting position-specific gap penalties and weight matrix choice. Nucleic Acids Res 1994;22:4673-80.
    • (1994) Nucleic Acids Res , vol.22 , pp. 4673-4680
    • Thompson, J.D.1    Higgins, D.G.2    Gibson, T.J.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.