Molecular evidence suggesting interspecific hybridization in Zoanthus spp. (Anthozoa: Hexacorallia)

Zoological Science

Volumn 24, Issue 4, 2007, Pages 346-359

  Reimer, James Davis ^a,d   Takishita, Kiyotaka ^a   Ono, Shusuke ^b   Tsukahara, Junzo ^c   Maruyama, Tadashi ^a  

^a JAPAN AGENCY FOR MARINE EARTH SCIENCE AND TECHNOLOGY   (Japan)

^b Miyakonojo Higashi High School   (Japan)

^c KAGOSHIMA UNIVERSITY   (Japan)

^d UNIVERSITY OF THE RYUKYUS   (Japan)

Author keywords

COI; Hybridization; ITS rDNA; Zoanthid; Zoanthus

Indexed keywords

RIBOSOMAL SPACER DNA;

ANIMAL; ANTHOZOA; ARTICLE; BIODIVERSITY; CLASSIFICATION; GENETICS; HORIZONTAL GENE TRANSFER; MOLECULAR GENETICS; NUCLEOTIDE SEQUENCE; PHYLOGENY; PHYSIOLOGY; SEQUENCE ALIGNMENT; SPECIES DIFFERENCE;

ANIMALS; ANTHOZOA; BASE SEQUENCE; BIODIVERSITY; DNA, RIBOSOMAL SPACER; GENE TRANSFER, HORIZONTAL; MOLECULAR SEQUENCE DATA; PHYLOGENY; SEQUENCE ALIGNMENT; SPECIES SPECIFICITY;

ANEMONE; ANTHOZOA; ZOANTHARIA; ZOANTHIDAE; ZOANTHUS; ZOANTHUS GIGANTUS; ZOANTHUS KUROSHIO; ZOANTHUS SANSIBARICUS;

EID: 34249896210     PISSN: 02890003     EISSN: 02890003     Source Type: Journal    
DOI: 10.2108/zsj.24.346     Document Type: Article

References (55)

1. Alvarez I, Wendel JF (2003) Ribosomal ITS sequences and plant phylogenetic inference. Mol Phylogenet Evol 29: 417-434
2. Aguilar JF, Feliner GN (2003) Additive polymorphisms and reticulation in an ITS phylogeny of thrifts (Armeria, Plumbaginaceae). Mol Phylogenet Evol 28: 430-447
3. Babcock RC, Ryland JS (1990) Larval development of a tropical zoanthid (Protopalythoa sp.). Invertebr Reprod Dev 17: 229-236
4. Buckley TR, Cordeiro M, Marshall DC, Simon C (2006) Differentiating between hypotheses of lineage sorting and introgression in New Zealand alpine cicadas (Maoricicada Dugdale). Syst Biol 55: 411-425
5. Clement M, Posada D, Crandall KA (2000) TCS: a computer program to estimate gene genealogies. Mol Ecol 9: 1657-1660
6. Cooke WJ (1976) Reproduction, growth, and some tolerances of Zoanthus pacificus and Palythoa vestitus in Kaneohe Bay, Hawaii. In "Coelenterate Ecology and Behaviour" Ed by GO Mackie, Plenum Press, New York, pp 281-288
7. Dawson MN, Jacobs DK (2001) Molecular evidence for cryptic species of Aurelia aurita (Cnidaria, Scyphozoa). Biol Bull 200: 92-96
8. Diekmann OE, Bak RPM, Stam WT, Olsen JL (2001) Molecular genetic evidence for probably reticulate speciation on the coral genus Madracis from a Caribbean fringing reef slope. Mar Biol 139: 221-233
9. Folmer O, Black M, Hoeh W, Lutz R, Vrijenhoek R (1994) DNA primers for amplification of mitochondrial cytochrome c oxidase subunit I from diverse metazoan invertebrates. Mol Mar Biol Biotechnol 3: 294-299
10. France SC, Hoover LL (2002) DNA sequences of the mitochondrial COI gene have low levels of divergence among deep-sea octocorals (Cnidaria: Anthozoa). Hydrobiologia 471: 149-155
11. Fukami H, Budd AF, Levitan DR, Jara J, Kersanach R, Knowlton N (2004) Geographic differences in species boundaries among members of the Montastraea annularis complex based on molecular and morphological markers. Evolution 58: 324-327
12. Guindon S, Gascuel O (2003) A simple, fast, and accurate algorithm to estimate large phylogenies by maximum likelihood. Syst Biol 52: 696-704
13. Grant V (1981) Plant Speciation. Columbia University Press, New York 2nd Ed
14. Hatta M, Fukami H, Wang W, Omori M, Shimoike K, Hayashibara T, Ina Y, Sugiyama T (1999) Reproductive and genetic evidence for a reticulate evolutionary history of mass-spawning corals. Mol Biol Evol 16: 1607-1613
15. Hung YT, Chen AC, Wu WJ, Li CC, Shih CJ (2004) Phylogenetic utility of the ribosomal transcribed spacer 2 in Strumigenys spp. (Hymenoptera: Formicidae). Mol Phylogenet Evol 32: 407-415
16. Hunter CL, Morden CW, Smith CM (1997) The utility of ITS sequences assessing relationships among zooxanthellae and corals. Proc 8th Int Coral Reef Symp 2: 1559-1602
17. Karlson RH (1981) Reproductive patterns in Zoanthus spp. from Discovery Bay, Jamaica. Proc 4th Int Coral Reef Symp 2: 699-704
18. Kimura M (1980) A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences. J Mol Evol 16: 111-120
19. Knowlton N (2000) Molecular genetic analyses of species-boundaries in the sea. Hydrobiologia 420: 73-90
20. LaJeunesse TC, Trench RK (2000) The biogeography of two species of Symbiodinium (Freudenthal) inhabiting the intertidal anemone Anthopleura elegantissima (Brandt). Biol Bull 199: 126-134
21. Levitan DR, Fukami H, Jara J, Kline D, McGovern TM, McGhee KE, Swanson CA, Knowlton N (2004) Mechanisms of reproductive isolation among sympatric broadcast-spawning corals of the Montastraea annularis species complex. Evolution 58: 308-323
22. Lihova J, Aguilar JF, Marhold K, Feliner GN (2004) Origin of the disjunct tetraploid Cardamine amporitana (Brassicaceae) assessed with nuclear and chloroplast DNA sequence data. Amer J Bot 91: 1231-1242
23. Marquez LM, van Oppen MJH, Willis B, Miller DJ (2002) Sympatric populations of the highly cross-fertile coral species Acropora hyacinthus and Acropora cytherea are genetically distinct. Proc R Soc Lond B 269: 1289-1294
24. Marquez LM, Miller DJ, MacKenzie JB, van Oppen MJH (2003) Pseudogenes contribute to the extreme diversity of nuclear ribosomal DNA in the hard coral Acropora. Mol Biol Evol 20: 1077-1086
25. McFadden CS, Hutchinson MB (2004) Molecular evidence for the hybrid origin of species in the soft coral genus Alcyonium (Cnidaria: Anthozoa: Octocorallia). Mol Ecol 13: 1495-1505
26. Medina M, Weil E, Szmant AM (1999) Examination of the Montastraea annularis species complex (Cnidaria: Scleractinia) using ITS and COI sequences. Mar Biotechnol 1: 89-97
27. Odorico DM, Miller DJ (1997) Variation among the ribosomal internal transcribed spacers and 5.8S rDNA among five species of Acropora (Cnidaria; Scleractinia): patterns of variation consistent with reticulate evolution. Mol Biol Evol 14: 465-473
28. Ono S, Reimer JD, Tsukahara J (2005) Reproduction of Zoanthus sansibaricus in the infra-littoral zone at Taisho Lava Field, Sakurajima, Kagoshima, Japan. Zool Sci 22: 247-255
29. Penland L, Kloulechad J, Idip D, van Woesik R (2004) Coral spawning in the western Pacific Ocean is related to solar insolation: evidence of multiple spawning events in Palau. Coral Reefs 23: 133-140
30. Pharmawati M, Yan G, Sedgley R, Finnegan PM (2004) Chloroplast DNA inheritance and variation in Leucadendron species (Proteaceae) as revealed by PCR-RFLP. Theor Appl Genet 109: 1694-1701
31. Reimer JD, Ono S, Fujiwara Y, Takishita K, Tsukahara J (2004) Reconsidering Zoanthus spp. diversity: molecular evidence of conspecificity within four previously presumed species. Zool Sci 21: 517-525
32. Reimer JD, Ono S, Iwama A, Tsukahara J, Takishita K, Maruyama T (2006a) Morphological and molecular revision of Zoanthus (Anthozoa: Hexacorallia) from southwestern Japan with description of two new species. Zool Sci 23: 261-275
33. Reimer JD, Takishita K, Ono S, Maruyama T, Tsukahara J (2006b) Latitudinal and intracolony ITS-rDNA sequence variation in the symbiotic dinoflagellate genus Symbiodinium (Dinophyceae) in Zoanthus sansibaricus (Anthozoa: Hexacorallia). Phycol Res 54: 122-132
34. Rodriguez F, Oliver JL, Marin A, Medina JR (1990) The general stochastic model of nucleotide substitution. J Theor Biol 142: 485-501
35. Romano SL, Palumbi SR (1997) Molecular evolution of a portion of the mitochondrial 16S ribosomal gene region in scleractinian corals. J Mol Evol 45: 397-411
36. Ronquist F, Huelsenbeck JP (2003) Bayesian phylogenetic inference under mixed models. Bioinformatics 19: 1572-1574
37. Ryland JS, Babcock RC (1991) Annual cycle of gametogenesis and spawning in a tropical zoanthid, Protopalythoa sp. Hydrobiologia 216-217: 117-123
38. Saitou N, Nei M (1987) The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol Biol Evol 4: 406-425
39. Sang T, Crawford DJ, Stuessy TF (1995) Documentation of reticulate evolution in peonies (Paeonia) using internal transcribed spacer sequences of nuclear ribosomal DNA: implications for biogeography and concerted evolution. Proc Natl Acad Sci USA 92: 6813-6817
40. Schliewen UK, Klee B (2004) Reticulate sympatric speciation in Cameroonian Crater lack cichlids. Front Zool 1: 5
41. Shaw KL (2002) Conflict between mitochondrial and nuclear DNA phylogenies of a recent species radiation: what mitochondrial reveals and conceals about modes of speciation in Hawaiian crickets. Proc Natl Acad Sci USA 99: 16122-16127
42. Shearer TL, van Oppen MJH, Romano SL, Worheide G (2002) Slow mitochondrial DNA sequence evolution in the Anthozoa (Cnidaria). Mol Ecol 11: 2475-2487
43. Sugita T, Nishikawa A, Ikeda R, Shinoda T (1999) Identification of medically relevant Trichosporon species based on sequences of internal transcribed spacer regions and construction of a database for Trichosporon identification. J Clin Microbiol 37: 1985-1993
44. Swofford DL (1998) PAUP*. Phylogenetic analysis using parsimony (*and other methods) Vers 4. Sinauer Associates, Sunderland, MA, USA
45. th Anniversary Conference, Heron Island October 1997" Ed by JG Greenwood, NJ Hall, School of Marine Sciences, The University of Queensland, Brisbane, pp 237-244
46. Thompson JD, Gibson TJ, Plewniak F, Jeanmougin F, Higgins DG (1997) The ClustalX windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Res 25: 4876-4882
47. van Oppen MJH, Koolmees EM, Veron JEN (2004) Patterns of evolution in the scleractinian coral genus Montipora (Acroporidae). Mar Biol 144: 9-18
48. van Oppen MJH, McDonald BJ, Willis B, Miller DJ (2001) The evolutionary history of the coral genus Acropora (Scleractinia, Cnidaria) based on a mitochondrial and a nuclear marker: reticulation, incomplete lineage sorting, or morphological convergence? Mol Biol Evol 18: 1315-1329
49. van Oppen MJH, Willis BL, Rheede TV, Miller DJ (2002) Spawning times, reproductive compatibilities and genetic structuring in the Acropora aspera group: evidence for natural hybridization and semi-permeable species boundaries in corals. Mol Ecol 11: 1363-1376
50. van Oppen MJH, Willis BL, Van Vugt HWJA, Miller DJ (2000) Examination of species boundaries in the Acropora cervicornis group (Scleractinia, Cnidaria) using nuclear DNA sequence analyses. Mol Ecol 9: 1363-1373
51. Veron JEN (1995) Corals of the World: The Biogeography and Evolution of the Scleractinia. University of New South Wales Press, Sydney
52. Vollmer SV, Palumbi SR (2002) Hybridization and the evolution of coral reef diversity. Science 296: 2023-2025
53. Vollmer SV, Palumbi SR (2004) Testing the utility of internally transcribed spacer sequences in coral phylogenetics. Mol Ecol 13: 2763-2772
54. von der Schulenburg JHG, Hancock JM, Pagnamenta A, Sloggett JJ, Majerus MEN, Hurst GDD (2001) Extreme length and length variation in the first ribosomal internal transcribed spacer of ladybird beetles (Coleoptera: Coccinellidae). Mol Biol Evol 18: 648-660
55. Worheide G, Nichols SA, Goldberg J (2004) Intragenomic variation of the rRNA internal transcribed spacers in sponges (Phylum Porifera): implications for phylogenetic studies. Mol Phylogenet Evol 33: 816-830