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Volumn 8, Issue SUPPL. 2, 2007, Pages

Constrained hidden Markov models for population-based haplotyping

Author keywords

[No Author keywords available]

Indexed keywords

COMPUTATIONAL COSTS; CONSTRAINED HIDDEN MARKOV MODELS; HARDY-WEINBERG EQUILIBRIUM; LABORATORY MEASUREMENTS; PROBABILISTIC APPROACHES; QUALITY OF RESULTS; RECONSTRUCTION ACCURACY; WELL-ESTABLISHED TECHNIQUES;

EID: 34249850550     PISSN: None     EISSN: 14712105     Source Type: Journal    
DOI: 10.1186/1471-2105-8-89     Document Type: Article
Times cited : (8)

References (16)
  • 1
    • 79959524146 scopus 로고    scopus 로고
    • A haplotype map of the human genome
    • The International HapMap Consortium 10.1038/nature04226 16255080
    • The International HapMap Consortium A haplotype map of the human genome Nature 2005, 437:1299-1320 10.1038/nature04226 16255080
    • (2005) Nature , vol.437 , pp. 1299-1320
  • 2
    • 27544473944 scopus 로고    scopus 로고
    • A comprehensive literature review of haplotyping software and methods for use with unrelated individuals
    • 15814067
    • Salem R Wessel J Schork N A comprehensive literature review of haplotyping software and methods for use with unrelated individuals Human Genomics 2005, 2:39-66 15814067
    • (2005) Human Genomics , vol.2 , pp. 39-66
    • Salem, R.1    Wessel, J.2    Schork, N.3
  • 4
    • 0024610919 scopus 로고
    • A tutorial on hidden Markov models and selected applications in speech recognition
    • 10.1109/5.18626
    • Rabiner L A tutorial on hidden Markov models and selected applications in speech recognition Proceedings of the IEEE 1989, 77(2):257-286 10.1109/5.18626
    • (1989) Proceedings of the IEEE , vol.77 , Issue.2 , pp. 257-286
    • Rabiner, L.1
  • 6
    • 33644974019 scopus 로고    scopus 로고
    • A fast and flexible statistical model for large-scale population genotype data: Applications to inferring missing genotypes and haplotypic phase
    • 10.1086/502802 16532393 1424677
    • Scheet P Stephens M A fast and flexible statistical model for large-scale population genotype data: Applications to inferring missing genotypes and haplotypic phase Am J Hum Genet 2006, 78:629-644 10.1086/ 502802 16532393 1424677
    • (2006) Am J Hum Genet , vol.78 , pp. 629-644
    • Scheet, P.1    Stephens, M.2
  • 7
    • 2442694424 scopus 로고    scopus 로고
    • A Markov chain approach to reconstruction of long haplotypes
    • World Scientific Altman RB, Dunker AK, Hunter L, Jung TA, Klein TE 14992496
    • Eronen L Geerts F Toivonen H A Markov chain approach to reconstruction of long haplotypes Pacific Symposium on Biocomputing World Scientific Altman RB, Dunker AK, Hunter L, Jung TA, Klein TE 2004:104-115 14992496
    • (2004) Pacific Symposium on Biocomputing , pp. 104-115
    • Eronen, L.1    Geerts, F.2    Toivonen, H.3
  • 8
    • 0034791035 scopus 로고    scopus 로고
    • High-resolution haplotype structure in the human genome
    • 10.1038/ng1001-229 11586305
    • Daly M Rioux J Schaffner S Hudson T Lander E High-resolution haplotype structure in the human genome Nature Genetics 2001, 29:229-232 10.1038/ ng1001-229 11586305
    • (2001) Nature Genetics , vol.29 , pp. 229-232
    • Daly, M.1    Rioux, J.2    Schaffner, S.3    Hudson, T.4    Lander, E.5
  • 11
    • 13844270527 scopus 로고    scopus 로고
    • Accounting for decay of linkage disequilibrium in haplotype inference and missing-data imputation
    • 10.1086/428594 15700229 1196397
    • Stephens M Scheet P Accounting for decay of linkage disequilibrium in haplotype inference and missing-data imputation Am J Hum Genet 2005, 76:449-462 10.1086/428594 15700229 1196397
    • (2005) Am J Hum Genet , vol.76 , pp. 449-462
    • Stephens, M.1    Scheet, P.2
  • 12
    • 33645015512 scopus 로고    scopus 로고
    • A block-free hidden Markov model for genotypes and its applications to disease association
    • 10.1089/cmb.2005.12.1243 16379532
    • Kimmel G Shamir R A block-free hidden Markov model for genotypes and its applications to disease association Journal of Computational Biology 2005, 12(10):1243-1259 10.1089/cmb.2005.12.1243 16379532
    • (2005) Journal of Computational Biology , vol.12 , Issue.10 , pp. 1243-1259
    • Kimmel, G.1    Shamir, R.2
  • 13
    • 33846584121 scopus 로고    scopus 로고
    • HaploRec: Efficient and accurate large-scale reconstruction of haplotypes
    • 1766938 17187677 10.1186/1471-2105-7-542
    • Eronen L Geerts F Toivonen H HaploRec: Efficient and accurate large-scale reconstruction of haplotypes BMC Bioinformatics 2006, 7:542 1766938 17187677 10.1186/1471-2105-7-542
    • (2006) BMC Bioinformatics , vol.7 , pp. 542
    • Eronen, L.1    Geerts, F.2    Toivonen, H.3
  • 14
    • 0036184745 scopus 로고    scopus 로고
    • Generating samples under a wright-fisher neutral model of genetic variation
    • 10.1093/bioinformatics/18.2.337 11847089
    • Hudson R Generating samples under a wright-fisher neutral model of genetic variation Bioinformatics 2002, 18:337-338 10.1093/bioinformatics/ 18.2.337 11847089
    • (2002) Bioinformatics , vol.18 , pp. 337-338
    • Hudson, R.1
  • 15
    • 13144265739 scopus 로고    scopus 로고
    • Genome-wide association studies: Theoretical and practical concerns
    • 10.1038/nrg1522 15716907
    • Wang W Barratt B Clayton D Todd J Genome-wide association studies: theoretical and practical concerns Nature Reviews Genetics 2005, 6:109-118 10.1038/nrg1522 15716907
    • (2005) Nature Reviews Genetics , vol.6 , pp. 109-118
    • Wang, W.1    Barratt, B.2    Clayton, D.3    Todd, J.4
  • 16
    • 0032869123 scopus 로고    scopus 로고
    • Molecular genetics of the finnish disease heritage
    • 10.1093/hmg/8.10.1913 10469845
    • Peltonen L Jalanko A Varilo T Molecular genetics of the finnish disease heritage Human Molecular Genetics 1999, 8:1913-1923 10.1093/hmg/ 8.10.1913 10469845
    • (1999) Human Molecular Genetics , vol.8 , pp. 1913-1923
    • Peltonen, L.1    Jalanko, A.2    Varilo, T.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.