Effects of kin-structured seed dispersal on the genetic structure of the clonal dioecious shrub Ilex leucoclada

Evolution

Volumn 61, Issue 6, 2007, Pages 1289-1300

  Torimaru, T ^a   Tani, N ^b   Tsumura, Y ^b   Nishimura, N ^c   Tomaru, N ^a  

^a NAGOYA UNIVERSITY   (Japan)

^b FORESTRY AND FOREST PRODUCTS RESEARCH INSTITUTE   (Japan)

^c NAGOYA SANGYO UNIVERSITY   (Japan)

Author keywords

Clonal structure; Correlated mating; Genet; Genetic structure; Ilex leucoclada; Kin structured gene dispersal; Multiseeded fruits

Indexed keywords

MICROSATELLITE DNA;

CLONAL ORGANISM; DIOECY; GENE FLOW; GENET; GENETIC STRUCTURE; GENOTYPE; ISOLATED POPULATION; MATING BEHAVIOR; MODEL; SEED DISPERSAL; SHRUB;

ARTICLE; BIOLOGICAL MODEL; COMPUTER SIMULATION; FRUIT; GENETICS; GENOTYPE; ILEX; PHYSIOLOGY; PLANT SEED; POPULATION DENSITY; PRENATAL DEVELOPMENT; REPRODUCTION;

COMPUTER SIMULATION; FRUIT; GENOTYPE; ILEX; MICROSATELLITE REPEATS; MODELS, GENETIC; POPULATION DENSITY; REPRODUCTION; SEEDS;

AVES; ILEX; ILEX LEUCOCLADA;

EID: 34249826619     PISSN: 00143820     EISSN: 15585646     Source Type: Journal    
DOI: 10.1111/j.1558-5646.2007.00108.x     Document Type: Article

References (69)

1. Alberto, F., L. Gouveia, S. Arnaud-Haond, J. L. Perez-Llorens, C. M. Duarte, and E. A. Serrao. 2005. Within-population spatial genetic structure, neighborhood size and clonal subrange in the seagrass Cymodocea nodosa. Mol. Ecol. 14 : 2669 2681.
2. Bygott, G. D., B. C. R. Bertram, and J. P. Hanby. 1979. Male lions in large coalitions gain reproductive advantages. Nature 282 : 839 841.
3. Chepoke-Sade, D., and D. S. Sade. 1979. Patterns of group splitting within matrilineal kinship groups: a study of social group structure in Macaca mulatta (Cercopithidae, Primates). Behav. Ecol. Sociobiol. 5 : 67 86.
4. Chung, M. G., and B. K. Epperson. 1999. Spatial genetic structure of clonal and sexual reproduction in populations of Adenophora grandiflora (Campanulaceae). Evolution 53 : 1068 1078.
5. Chung, M. G., and B. K. Epperson. 2000. Clonal and genetic structure in Eurya emarginata (Theaceae). Heredity 84 : 170 177.
6. Chung, M. G., J. M. Chung, and B. K. Epperson. 1999. Genetic structure of allozyme polymorphism within population of Rhus trichocarpa (Anacardiaceae). Silvae Genet. 48 : 223 227.
7. Chung, M. G., J. M. Chung, M. Y. Chung, and B. K. Epperson. 2000a. Spatial distribution of allozyme polymorphisms following clonal and sexual reproduction in populations of Rhus javanica (Anacardiaceae). Heredity 84 : 178 185.
8. Chung, M. G., M. Y. Chung, G. S. Oh, and B. K. Epperson. 2000b. Genetic structure in a Neolitsea sericea population (Lauraceae). Heredity 85 : 490 497.
9. Chung, M. Y., J. D. Nason, B. K. Epperson, and M. G. Chung. 2003. Temporal aspects of the fine-scale genetic structure in a population of Cinnamomum insularimontanum (Lauraceae). Heredity 90 : 98 106.
10. Chung, J. M., B. C. Lee, J. S. Kim, C-W. Park, M. Y. Chung, and M. G. Chung. 2006. Fine-scale genetic structure among genetic individuals of the clone-forming monotypic genus Echinosophora koreensis (Fabaceae). Ann. Bot. 98 : 165 173.
11. Cockerham, C. C. 1969. Variance of gene frequencies. Evolution 23 : 72 84.
12. Crawford, T. J. 1984. The estimation of neighborhood parameters for plant populations. Heredity 52 : 273 283.
13. Epperson, B. K. 1990. Spatial autocorrelation of genotypes under directional selection. Genetics 124 : 757 771.
14. Epperson, B. K. 1993. Recent advances in correlation analysis of spatial patterns of genetic variation. Evol. Biol. 27 : 95 155.
15. Epperson, B. K., and E. R. Alvarez-Buylla. 1997. Limited seed dispersal and genetic structure in life stages of Cecropia obtusifolia. Evolution 51 : 275 282.
16. Fenster, C. B. 1991. Gene flow in Chamaecrista fasciculata (Leguminosae) I. Gene dispersal. Evolution 45 : 398 409.
17. Fenster, C. B., X. Vekemans, and O. Hardy. 2003. Quantifying gene flow from spatial genetic structure data in a metapopulation of Chamaecrista fasciculate (Leguminosae). Evolution 57 : 995 1007.
18. Fix, A. G. 1975. Fission-fusion and lineal effect: aspects of the population structure of the Semai Senoi of Malaysia. Am. J. Phys. Anthropol. 43 : 295 302.
19. Fix, A. G. 1981. Kin-structured migration and the rate of advance of an advantageous gene. Am. J. Phys. Anthropol. 55 : 433 442.
20. Furnier, G. R., P. Knowles, M. A. Clyde, and B. P. Danick. 1987. Effects of avian seed dispersal on the genetic structure of whitebark pine populations. Evolution 41 : 607 612.
21. Furuya, Y. 1968. On the fission of troops of Japanese monkeys. Primates 9 : 323 349.
22. García, C., J. M. Arroyo, J. A. Godoy, and P. Jordano. 2005. Mating patterns, pollen dispersal, and the ecological maternal neighbourhood in a Prunus mahaleb L population. Mol. Ecol. 14 : 1821 1830.
23. Gao, S., and E. Thompson. 1992. Performing the exact test of Hardy-Weinberg proportion from multiple alleles. Biometrics 48 : 361 372.
24. Giles, B. E., and J. Goudet. 1997. Genetic differentiation in Silene dioica metapopulations: estimation of spatiotemporal effects in a successional plant species. Am. Nat. 149 : 507 526.
25. Giles, B. E., E. Lundqvist, and J. Goudet. 1998. Restricted gene flow and subpopulation differentiation in Silene dioica. Heredity 80 : 715 723.
26. Godoy, J. A., and P. Jordano. 2001. Seed dispersal by animals: exact identification of source trees with endocarp DNA microsatellites. Mol. Ecol. 10 : 2275 2283.
27. Hämmerli, A., and T. B. H. Reusch. 2003. Genetic neighbourhood of clone structure in eelgrass meadows quantified by spatial autocorrelation of microsatellite markers. Heredity 91 : 448 455.
28. Hamrick, J. L., and M. D. Loveless. 1986. The influence of seed dispersal mechanisms on the genetic structure of plant populations. Pp. 211 223 in A. Estrada, T. H. Fleming, eds. Frugivores and seed dispersal. Dr. Junk Publishers, Dordrecht, The Netherlands.
29. Hamrick, J. L., and J. D. Nason. 1996. Consequences of dispersal in plants. Pp. 203 236 in O. E. J. Rhodes, R. K. Chesser, and M. H. Smith, eds., Population dynamics in ecological space and time. The Univ. of Chicago Press, Chicago, IL.
30. Hamrick, J. L., D. A. Murawski, and J. D. Nason. 1993. The influence of seed dispersal mechanisms on the genetic structure of tropical tree populations. Vegetatio 107/108 : 281 297.
31. Harada, Y., and Y. Iwasa. 1996. Analyses of spatial patterns and population processes of clonal plants. Res. Popul. Ecol. 38 : 153 164.
32. Hardy, O. J., and X. Vekemans. 2002. SPAGeDi: a versatile computer program to analyse genetic structure at the individual or population levels. Mol. Ecol. Notes 2 : 618.
33. Hardy, O. J., S. C. González-Martínez, B. Colas, H. Fréville, A. Mignot, and I. Olivieri. 2004. Fine-scale genetic structure and gene dispersal in Centaurea corymbosa (Asteraceae). II. Correlated paternity within and among sibships. Genetics 168 : 1601 1614.
34. Herrera, C. M., and P. Jordano. 1981. Prunus mahaleb and birds: the high-efficiency seed dispersal system of a temperate fruiting tree. Ecol. Monogr. 51 : 203 218.
35. Heywood, J. S. 1991. Spatial analysis of genetic variation in plant populations. Annu. Rev. Ecol. Evol. Syst. 22 : 335 355.
36. Hoppes, W. G. 1988. Seedfall pattern of several species of bird-dispersal plants in an Illinois woodland. Ecology 69 : 320 329.
37. Ingvarsson, P. K., and B. E. Giles. 1999. Kin-structured colonization and small-scale genetic differentiation in Silene dioica. Evolution 53 : 605 611.
38. Ishizuka, K. 1974. Mountain vegetation. Pp. 178 188 in M. Numata ed. The flora and vegetation of Japan. Kodansha, Tokyo.
39. Kelly, J. K. 1996. Kin selection in the annual plant Impatiens capensis. Am. Nat. 147 : 889 918.
40. Levin, D. A. 1984. Inbreeding depression and proximity-dependent crossing success in Phlox drummondii. Evolution 38 : 116 127.
41. Levin, D. A., and A. G. Fix. 1989. A model of kin-migration in plants. Theor. Appl. Genet. 77 : 332 336.
42. Loiselle, B. A., V. L. Sork, J. D. Nason, and C. Graham. 1995. Genetic structure of a tropical understorey shrub, Psychotria officinalis (Rubiaceae). Am. J. Bot. 82 : 1420 1425.
43. Malécot, G. 1967. Identical loci and relationships. Pp. 317 332 in L. M. Lecam and J. Neyman, eds. Proceedings of the Fifth Berkeley Symposium on Mathematical Statistics and Probability, Vol. 4. California Univ. Press, Berkeley.
44. Muona, O., G. F. Moran, and J. C. Bell. 1991. Hierarchical patterns of correlated mating in Acacia melanoxylon. Genetics. 127 : 619 626.
45. Nash, L. T. 1976. Troop fission in free-ranging baboons in the Gombe Stream National Park, Tanzania. Am. J. Phys. Anthropol. 48 : 63 77.
46. Nei, M. 1987. Molecular evolutionary genetics. Columbia Univ. Press, New York.
47. Park, J. C., and C. R. Werth. 1993. A study of spatial features of clones in a population of bracken fern, Pteridium aquilinum (Dennstaedtiaceae). Am. J. Bot. 80 : 537 544.
48. Pornon, A., N. Escaravage, P. Thomas, and P. Taberlet. 2000. Dynamics of genotypic structure in clonal Rhododendron ferrugineum Ericaceae populations. Mol. Ecol. 9 : 1099 1111.
49. Raymond, M., and F. Rousset. 1995. GENEPOP Version 1.2: population genetics software for exact tests and ecumenicism. J. Hered. 86 : 248 249.
50. Rogers, A. R. 1987. A model of kin-structured migration. Evolution 41 : 417 426.
51. Rousset, F. 2000. Genetic differentiation between individuals. J. Evol. Biol. 13 : 58 62.
52. Sawyer, S. 1977. Asymptotic properties of the equilibrium probability of identity in a geographically structured population. Adv. Appl. Prob. 9 : 268 282.
53. Schuster, W. S. F., and J. B. Mitton. 1991. Relatedness within clusters of a bird-dispersed pine and the potential for kin interactions. Heredity 67 : 41 48.
54. Setsuko, S., K. Ishida, and N. Tomaru. 2004. Size distribution and genetic structure in relation to clonal growth within a population of Magnolia tomentosa Thunb. (Magnoliaceae). Mol. Ecol. 13 : 2645 2653.
55. Sokal, R. R., and F. J. Rholf. 1995. Biometry, 3rd ed. W. H. Freeman and Co., New York.
56. Suzuki, J., T. Herben, F. Krahulec, H. Štorchová, and T. Hara. 2006. Effects of neighbourhood structure and tussock dynamics on genet demography of Festuca rubra in a mountain meadow. J. Ecol. 94 : 66 76.
57. Tani, N., N. Tomaru, Y. Tsumura, M. Araki, and K. Ohba. 1998. Genetic structure within a Japanese stone pine (Pinus pumila Regal) population on Mt. Aino-Dake in Central Honshu, Japan. J. Plant Res. 111 : 7 15.
58. Torimaru, T., and N. Tomaru. 2005. Fine-scale clonal structure and diversity within patches of a clone-forming dioecious shrub, Ilex leucoclada (Aquifoliaceae). Ann. Bot. 95 : 295 304.
59. Torimaru, T., and N. Tomaru. 2006. Relationships between flowering phenology, plant size and female reproductive output in a dioecious shrub, Ilex leucoclada (Aquifoliaceae). Can. J. Bot. 84 : 1860 1869.
60. Torimaru, T., N. Tomaru, N. Nishimura, and S. Yamamoto. 2003. Clonal diversity and genetic differentiation in Ilex leucoclada M. patches in an old-growth beech forest. Mol. Ecol. 12 : 809 818.
61. Torimaru, T., N. Tani, Y. Tsumura, K. Hiraoka, and N. Tomaru. 2004. Development and polymorphism of simple sequence repeat DNA markers for the evergreen shrub Ilex leucoclada M. Mol. Ecol. Notes 4 : 531 533.
62. Van der Pijl, L. 1972. Principles of dispersal in higher plants. 2nd ed. Springer, Berlin Heidelberg New York.
63. Vekemans, X., and O. J. Hardy. 2004. New insights from fine-scale spatial genetic structure analyses in plant populations. Mol. Ecol. 13 : 921 935.
64. Wang, J. 2004. Sibship reconstruction from genetic data with typing errors. Genetics 166 : 1963 1979.
65. Watanabe, S. 1994. Specia of tree. Univ. of Tokyo Press. Tokyo.
66. Wells, G. P., and A. G. Young. 2002. Effects of seed dispersal on spatial genetic structure in populations of Rutidosis leptorrhychoides with different levels of correlated paternity. Genet. Res. 79 : 219 226.
67. Wright, S. 1943. Isolation by distance. Genetics 28 : 114 138.
68. Yamamoto, S., N. Nishimura, and K. Matsui. 1995. Natural disturbance and tree species coexistence in old-growth beech-dwarf bamboo forest, southwestern Japan. J. Veg. Sci. 6 : 875 886.
69. Yamazaki, T. 1989. Aqulifoliaceae. Pp. 26 32 in Y. Satake, H. Hara, S. Watari, T. Tominari, eds. Wild flowers of Japan. Woody Plants II. Heibonsha Publishers, Tokyo.