메뉴 건너뛰기




Volumn 83, Issue 1, 2007, Pages 4-10

A time course study demonstrating RNA stability in postmortem skin

Author keywords

28S 18S ribosomal RNA; Postmortem; qRT PCR; RNA integrity; Skin

Indexed keywords

CELL CYCLE PROTEIN; CYSTEINE RICH PROTEIN 61; HYPOXIA INDUCIBLE FACTOR 1ALPHA; MESSENGER RNA; MYC PROTEIN; RNA; RNA 18S; RNA 28S;

EID: 34249809719     PISSN: 00144800     EISSN: 10960945     Source Type: Journal    
DOI: 10.1016/j.yexmp.2006.11.001     Document Type: Article
Times cited : (13)

References (38)
  • 1
    • 0017690216 scopus 로고
    • Method for detection of specific RNAs in agarose gels by transfer to diazobenzyloxymethyl-paper and hybridization with DNA probes
    • Alwine J.C., Kemp D.J., and Stark G.R. Method for detection of specific RNAs in agarose gels by transfer to diazobenzyloxymethyl-paper and hybridization with DNA probes. Proc. Natl. Acad. Sci. U. S. A. 74 (1977) 5350-5354
    • (1977) Proc. Natl. Acad. Sci. U. S. A. , vol.74 , pp. 5350-5354
    • Alwine, J.C.1    Kemp, D.J.2    Stark, G.R.3
  • 2
    • 0032916509 scopus 로고    scopus 로고
    • mRNA degradation. A tale of poly(A) and multiprotein machines
    • Carpousis A.J., Vanzo N.F., and Raynal L.C. mRNA degradation. A tale of poly(A) and multiprotein machines. Trends Genet. 15 (1999) 24-28
    • (1999) Trends Genet. , vol.15 , pp. 24-28
    • Carpousis, A.J.1    Vanzo, N.F.2    Raynal, L.C.3
  • 5
    • 0035971161 scopus 로고    scopus 로고
    • The angiogenic factors Cyr61 and connective tissue growth factor induce adhesive signaling in primary human skin fibroblasts
    • Chen C.C., Chen N., and Lau L.F. The angiogenic factors Cyr61 and connective tissue growth factor induce adhesive signaling in primary human skin fibroblasts. J. Biol. Chem. 276 (2001) 10443-10452
    • (2001) J. Biol. Chem. , vol.276 , pp. 10443-10452
    • Chen, C.C.1    Chen, N.2    Lau, L.F.3
  • 7
    • 33645550066 scopus 로고    scopus 로고
    • RNAi: a novel antisense technology and its therapeutic potential
    • Dallas A., and Vlassov A.V. RNAi: a novel antisense technology and its therapeutic potential. Med. Sci. Monit. 12 (2006) RA67-RA74
    • (2006) Med. Sci. Monit. , vol.12
    • Dallas, A.1    Vlassov, A.V.2
  • 8
    • 0036841485 scopus 로고    scopus 로고
    • Changes in differential gene expression because of warm ischemia time of radical prostatectomy specimens
    • Dash A., Maine I.P., Varambally S., Shen R., Chinnaiyan A.M., and Rubin M.A. Changes in differential gene expression because of warm ischemia time of radical prostatectomy specimens. Am. J. Pathol. 161 (2002) 1743-1748
    • (2002) Am. J. Pathol. , vol.161 , pp. 1743-1748
    • Dash, A.1    Maine, I.P.2    Varambally, S.3    Shen, R.4    Chinnaiyan, A.M.5    Rubin, M.A.6
  • 10
    • 0034011233 scopus 로고    scopus 로고
    • Processing renal biopsies for diagnostic mRNA quantification: improvement of RNA extraction and storage conditions
    • Eikmans M., Baelde H.J., De Heer E., and Bruijn J.A. Processing renal biopsies for diagnostic mRNA quantification: improvement of RNA extraction and storage conditions. J. Am. Soc. Nephrol. 11 (2000) 868-873
    • (2000) J. Am. Soc. Nephrol. , vol.11 , pp. 868-873
    • Eikmans, M.1    Baelde, H.J.2    De Heer, E.3    Bruijn, J.A.4
  • 11
    • 0034326273 scopus 로고    scopus 로고
    • Coordinate up-regulation of hypoxia inducible factor (HIF)-1alpha and HIF-1 target genes during multi-stage epidermal carcinogenesis and wound healing
    • Elson D.A., Ryan H.E., Snow J.W., Johnson R., and Arbeit J.M. Coordinate up-regulation of hypoxia inducible factor (HIF)-1alpha and HIF-1 target genes during multi-stage epidermal carcinogenesis and wound healing. Cancer Res. 60 (2000) 6189-6195
    • (2000) Cancer Res. , vol.60 , pp. 6189-6195
    • Elson, D.A.1    Ryan, H.E.2    Snow, J.W.3    Johnson, R.4    Arbeit, J.M.5
  • 12
    • 0029964835 scopus 로고    scopus 로고
    • A novel method for real time quantitative RT-PCR
    • Gibson U.E., Heid C.A., and Williams P.M. A novel method for real time quantitative RT-PCR. Genome Res. 6 (1996) 995-1001
    • (1996) Genome Res. , vol.6 , pp. 995-1001
    • Gibson, U.E.1    Heid, C.A.2    Williams, P.M.3
  • 13
    • 0034079993 scopus 로고    scopus 로고
    • Biological stability of RNA isolated from RNAlater-treated brain tumor and neuroblastoma xenografts
    • Grotzer M.A., Patti R., Geoerger B., Eggert A., Chou T.T., and Phillips P.C. Biological stability of RNA isolated from RNAlater-treated brain tumor and neuroblastoma xenografts. Med. Pediatr. Oncol. 34 (2000) 438-442
    • (2000) Med. Pediatr. Oncol. , vol.34 , pp. 438-442
    • Grotzer, M.A.1    Patti, R.2    Geoerger, B.3    Eggert, A.4    Chou, T.T.5    Phillips, P.C.6
  • 14
    • 0027049424 scopus 로고
    • A simplified ribonuclease protection assay
    • Hod Y. A simplified ribonuclease protection assay. BioTechniques 13 (1992) 852-854
    • (1992) BioTechniques , vol.13 , pp. 852-854
    • Hod, Y.1
  • 16
    • 0021041054 scopus 로고
    • Cell-specific regulation of the c-myc gene by lymphocyte mitogens and platelet-derived growth factor
    • Kelly K., Cochran B.H., Stiles C.D., and Leder P. Cell-specific regulation of the c-myc gene by lymphocyte mitogens and platelet-derived growth factor. Cell 35 (1983) 603-610
    • (1983) Cell , vol.35 , pp. 603-610
    • Kelly, K.1    Cochran, B.H.2    Stiles, C.D.3    Leder, P.4
  • 18
    • 18844406575 scopus 로고    scopus 로고
    • Stability of RNA isolated from human trabecular bone at post-mortem and surgery
    • Kuliwaba J.S., Fazzalari N.L., and Findlay D.M. Stability of RNA isolated from human trabecular bone at post-mortem and surgery. Biochim. Biophys. Acta 1740 (2005) 1-11
    • (2005) Biochim. Biophys. Acta , vol.1740 , pp. 1-11
    • Kuliwaba, J.S.1    Fazzalari, N.L.2    Findlay, D.M.3
  • 19
    • 0026754283 scopus 로고
    • Northern and Southern blot analysis of human RNA and DNA in autopsy material
    • Larsen S., Rygaard K., Asnaes S., and Spang-Thomsen M. Northern and Southern blot analysis of human RNA and DNA in autopsy material. APMIS 100 (1992) 498-502
    • (1992) APMIS , vol.100 , pp. 498-502
    • Larsen, S.1    Rygaard, K.2    Asnaes, S.3    Spang-Thomsen, M.4
  • 20
    • 0034965544 scopus 로고    scopus 로고
    • Expression profiling of ductal carcinoma in situ by laser capture microdissection and high-density oligonucleotide arrays
    • Luzzi V., Holtschlag V., and Watson M.A. Expression profiling of ductal carcinoma in situ by laser capture microdissection and high-density oligonucleotide arrays. Am. J. Pathol. 158 (2001) 2005-2010
    • (2001) Am. J. Pathol. , vol.158 , pp. 2005-2010
    • Luzzi, V.1    Holtschlag, V.2    Watson, M.A.3
  • 21
    • 0032542339 scopus 로고    scopus 로고
    • Down-regulation of BRCA1 in human sporadic breast cancer; analysis of DNA methylation patterns of the putative promoter region
    • Magdinier F., Ribieras S., Lenoir G.M., Frappart L., and Dante R. Down-regulation of BRCA1 in human sporadic breast cancer; analysis of DNA methylation patterns of the putative promoter region. Oncogene 17 (1998) 3169-3176
    • (1998) Oncogene , vol.17 , pp. 3169-3176
    • Magdinier, F.1    Ribieras, S.2    Lenoir, G.M.3    Frappart, L.4    Dante, R.5
  • 22
    • 0038147058 scopus 로고    scopus 로고
    • Stability of RNA from the retina and retinal pigment epithelium in a porcine model simulating human eye bank conditions
    • Malik K.J., Chen C.D., and Olsen T.W. Stability of RNA from the retina and retinal pigment epithelium in a porcine model simulating human eye bank conditions. Invest. Ophthalmol. Visual Sci. 44 (2003) 2730-2735
    • (2003) Invest. Ophthalmol. Visual Sci. , vol.44 , pp. 2730-2735
    • Malik, K.J.1    Chen, C.D.2    Olsen, T.W.3
  • 23
    • 0017872697 scopus 로고
    • Post-mortem changes in human central nervous tissue and the effects on quantitation of nucleic acids and enzymes
    • Mann D.M., Barton C.M., and Davies J.S. Post-mortem changes in human central nervous tissue and the effects on quantitation of nucleic acids and enzymes. Histochem. J. 10 (1978) 127-135
    • (1978) Histochem. J. , vol.10 , pp. 127-135
    • Mann, D.M.1    Barton, C.M.2    Davies, J.S.3
  • 24
    • 0032472778 scopus 로고    scopus 로고
    • Postmortem stability of total RNA isolated from rabbit ligament, tendon and cartilage
    • Marchuk L., Sciore P., Reno C., Frank C.B., and Hart D.A. Postmortem stability of total RNA isolated from rabbit ligament, tendon and cartilage. Biochim. Biophys. Acta 1379 (1998) 171-177
    • (1998) Biochim. Biophys. Acta , vol.1379 , pp. 171-177
    • Marchuk, L.1    Sciore, P.2    Reno, C.3    Frank, C.B.4    Hart, D.A.5
  • 27
    • 4444294198 scopus 로고    scopus 로고
    • RNA degradation in human breast tissue after surgical removal: a time-course study
    • Ohashi Y., Creek K.E., Pirisi L., Kalus R., and Young S.R. RNA degradation in human breast tissue after surgical removal: a time-course study. Exp. Mol. Pathol. 77 (2004) 98-103
    • (2004) Exp. Mol. Pathol. , vol.77 , pp. 98-103
    • Ohashi, Y.1    Creek, K.E.2    Pirisi, L.3    Kalus, R.4    Young, S.R.5
  • 28
    • 27144482083 scopus 로고    scopus 로고
    • Cyclin D1 induction through IkappaB kinase beta/nuclear factor-kappaB pathway is responsible for arsenite-induced increased cell cycle G1-S phase transition in human keratinocytes
    • Ouyang W., Ma Q., Li J., Zhang D., Liu Z.G., Rustgi A.K., and Huang C. Cyclin D1 induction through IkappaB kinase beta/nuclear factor-kappaB pathway is responsible for arsenite-induced increased cell cycle G1-S phase transition in human keratinocytes. Cancer Res. 65 (2005) 9287-9293
    • (2005) Cancer Res. , vol.65 , pp. 9287-9293
    • Ouyang, W.1    Ma, Q.2    Li, J.3    Zhang, D.4    Liu, Z.G.5    Rustgi, A.K.6    Huang, C.7
  • 29
    • 0032615427 scopus 로고    scopus 로고
    • mRNA: detection by in Situ and northern hybridization
    • Parker R.M., and Barnes N.M. mRNA: detection by in Situ and northern hybridization. Methods Mol. Biol. 106 (1999) 247-283
    • (1999) Methods Mol. Biol. , vol.106 , pp. 247-283
    • Parker, R.M.1    Barnes, N.M.2
  • 30
    • 17344392308 scopus 로고    scopus 로고
    • A new mathematical model for relative quantification in real-time RT-PCR
    • Pfaffl M.W. A new mathematical model for relative quantification in real-time RT-PCR. Nucleic Acids Res. 29 (2001) e45
    • (2001) Nucleic Acids Res. , vol.29
    • Pfaffl, M.W.1
  • 31
    • 0141957335 scopus 로고    scopus 로고
    • Quantifying mRNA in postmortem human brain: influence of gender, age at death, postmortem interval, brain pH, agonal state and inter-lobe mRNA variance
    • Preece P., and Cairns N.J. Quantifying mRNA in postmortem human brain: influence of gender, age at death, postmortem interval, brain pH, agonal state and inter-lobe mRNA variance. Brain Res. Mol. Brain Res. 118 (2003) 60-71
    • (2003) Brain Res. Mol. Brain Res. , vol.118 , pp. 60-71
    • Preece, P.1    Cairns, N.J.2
  • 33
    • 0022413038 scopus 로고
    • In vitro study of the biological activity of RNAs after incubation of hog liver, heart and brain tissue at room temperature
    • Reichert G.H., and Issinger O.G. In vitro study of the biological activity of RNAs after incubation of hog liver, heart and brain tissue at room temperature. Biochimie 67 (1985) 657-661
    • (1985) Biochimie , vol.67 , pp. 657-661
    • Reichert, G.H.1    Issinger, O.G.2
  • 34
    • 0032969178 scopus 로고    scopus 로고
    • A lysis, storage, and transportation buffer for long-term, room-temperature preservation of human clinical lymphoid tissue samples yielding high molecular weight genomic DNA suitable for molecular diagnosis
    • Schultz C.L., Akker Y., Du J., and Ratech H. A lysis, storage, and transportation buffer for long-term, room-temperature preservation of human clinical lymphoid tissue samples yielding high molecular weight genomic DNA suitable for molecular diagnosis. Am. J. Clin. Pathol. 111 (1999) 748-752
    • (1999) Am. J. Clin. Pathol. , vol.111 , pp. 748-752
    • Schultz, C.L.1    Akker, Y.2    Du, J.3    Ratech, H.4
  • 38
    • 0033575003 scopus 로고    scopus 로고
    • Direct comparison of GAPDH, beta-actin, cyclophilin, and 28S rRNA as internal standards for quantifying RNA levels under hypoxia
    • Zhong H., and Simons J.W. Direct comparison of GAPDH, beta-actin, cyclophilin, and 28S rRNA as internal standards for quantifying RNA levels under hypoxia. Biochem. Biophys. Res. Commun. 259 (1999) 523-526
    • (1999) Biochem. Biophys. Res. Commun. , vol.259 , pp. 523-526
    • Zhong, H.1    Simons, J.W.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.