Organisation of Photosystem I and Photosystem II in red alga Cyanidium caldarium: Encounter of cyanobacterial and higher plant concepts

Biochimica et Biophysica Acta - Bioenergetics

Volumn 1767, Issue 6, 2007, Pages 725-731

  Gardian, Zdenko ^a,b   Bumba, Ladislav ^a,c   Schrofel, Adam ^d   Herbstova, Miroslava ^a,b   Nebesarova, Jana ^a,b   Vacha, Frantisek ^a,b  

^a INSTITUTE OF MATHEMATICS   (Czech Republic)

^b UNIVERSITY OF SOUTH BOHEMIA   (Czech Republic)

^c INSTITUTE OF MICROBIOLOGY   (Czech Republic)

^d CHARLES UNIVERSITY   (Czech Republic)

Author keywords

Cyanidium caldarium; Electron microscopy; Photosynthesis; Photosystem I; Photosystem II; Red algae

Indexed keywords

ALGAL PROTEIN; CYTOCHROME C; PROTEIN PSAA; PROTEIN PSAB; PROTEIN PSAG; PROTEIN PSAH; PROTEIN SUBUNIT; UNCLASSIFIED DRUG;

ADAPTATION; ARTICLE; CELL CULTURE; CELL GROWTH; CYANIDIUM CALDARIUM; CYANOBACTERIUM; ELECTRON MICROSCOPY; IMAGE ANALYSIS; LIGHT; NONHUMAN; PHOTOSYNTHESIS; PHOTOSYSTEM I; PHOTOSYSTEM II; PRIORITY JOURNAL; PROTEIN BINDING; PROTEIN FUNCTION; PROTEIN LOCALIZATION; PROTEIN STRUCTURE; RED ALGA;

ALGAE, RED; CYANOBACTERIA; PHOTOSYSTEM I PROTEIN COMPLEX; PHOTOSYSTEM II PROTEIN COMPLEX;

CYANIDIUM CALDARIUM; CYANOBACTERIA; EMBRYOPHYTA; RHODOPHYTA;

EID: 34249804484     PISSN: 00052728     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.bbabio.2007.01.021     Document Type: Article

References (49)

1. Gantt E. Supramolecular membrane organization. In: Bryant D.A. (Ed). The Molecular Biology of Cyanobacteria (1994), Kluwer Academic Publishers, Dordrecht 139-216
2. Mustardy L., and Garab G. Granum revisited. A three-dimensional model-Where things fall into place. Trends Plant Sci. 8 (2003) 117-122
3. Mörschel E. The light-harvesting antennae of cyanobacteria and red algae. Photosynthetica 25 (1991) 137-144
4. Green B.R., and Durnford D.G. The chlorophyll-carotenoid proteins of oxygenic photosynthesis. Annu. Rev. Plant Physiol. Plant Mol. Biol. 47 (1996) 685-714
5. Wolfe G.R., Cunningham Jr. F.X., Durnford D., Green B.R., and Gantt E. Evidence for a common origin of chloroplasts with light-harvesting complexes of different pigmentation. Nature 367 (1994) 566-568
6. Jansson S. The light-harvesting chlorophyll a/b binding-proteins. Biochim. Biophys. Acta 1184 (1994) 1-19
7. Scheller H.V., Jensen P.E., Haldrup A., Lunde C., and Knoetzel J. Role of subunits in eukaryotic Photosystem I. Biochim. Biophys. Acta 1507 (2001) 41-60
8. Hansson O., and Wydrzynski T. Current perceptions of photosystem II. Photosynth. Res. 23 (1990) 131-162
9. Barber J., Nield J., Morris E.P., Zheleva D., and Hankamer B. The structure, function and dynamics of photosystem II. Physiol. Plant. 100 (1997) 817-827
10. Kamiya N., and Shen J.R. Crystal structure of oxygen-evolving photosystem II from Thermosynechococcus vulcanus at 3.7-Å resolution. Proc. Nat. Acad. Sci. U. S. A. 100 (2003) 98-103
11. Ferreira K.N., Iverson T.M., Maghlaoui K., Barber J., and Iwata S. Architecture of the photosynthetic oxygen-evolving center. Science 303 (2004) 1831-1838
12. Loll B., Kern J., Saenger W., Zouni A., and Biesiadka J. Towards complete cofactor arrangement in the 3.0 Å resolution structure of photosystem II. Nature 438 (2005) 1040-1044
13. Bumba L., and Vacha F. Electron microscopy in structural studies of photosystem. Photosynth. Res. 77 (2003) 1-19
14. Seidler A. The extrinsic polypeptides of photosystem II. Biochim. Biophys. Acta 1277 (1996) 35-60
15. Shen J.R., Ikeuchi M., and Inoue Y. Stoichiometric association of extrinsic cytochrome c550 and 12-kDa protein with a highly purified oxygen-evolving photosystem II core complexes from Synechococcus vulcanus. FEBS Lett. 301 (1992) 145-149
16. Enami I., Murayama H., Ohta H., Kamo M., Nakazato K., and Shen J.R. Isolation and characterization of a photosystem II complex from the red alga Cyanidium caldarium: association of cytochrome c550 and a 12(kDa protein with the complex. Biochim. Biophys. Acta 1232 (1995) 208-216
17. Enami I., Suzuki T., Tada O., Nakada Y., Nakamura K., Tohri A., Ohta H., Inoue I., and Shen J.-R. Distribution of the extrinsic proteins as a potential marker for the evolution of photosynthetic oxygen-evolving photosystem II. FEBS J. 272 (2005) 5020-5030
18. Chitnis P.R. Photosystem I: function and physiology. Annu. Rev. Plant Physiol. Plant Mol. Biol. 52 (2001) 593-626
19. Fromme P., Jordan P., and Krauss N. Structure of photosystem I. Biochim. Biophys. Acta 1507 (2001) 5-31
20. Jordan P., Fromme P., Witt H.T., Klukas O., Saenger W., and Krauss N. Three-dimensional structure of cyanobacterial photosystem I at 2.5 Å resolution. Nature 411 (2001) 909-917
21. Ben-Shem A., Frolow F., and Nelson N. Crystal structure of plant photosystem I. Nature 426 (2003) 630-635
22. van der Staay G.W.M., Boekema E.J., Dekker J.P., and Matthijs C.P. Characterization of trimeric Photosystem I particles from the prochlorophyte Prochlorothrix hollandica by electron microscopy and image analysis. Biochim. Biophys. Acta 1142 (1993) 189-193
23. Kruip J., Chitnis P.R., Lagoutte B., Rogner M., and Boekema E.J. Structural organization of the major subunits in cyanobacterial photosystem I. Localization of subunits PsaC, -D, -E, -F, and -J. J. Biol. Chem. 272 (1997) 17061-17069
24. Boekema E.J., Jensen P.E., Schlodder E., van Breemen J.F.L., van Roon H., Scheller V.H., and Dekker J.P. Green plant photosystem I binds light-harvesting complex I on one side of the complex. Biochemistry 40 (2001) 1029-1036
25. Germano M., Yakushevska A.E., Keegstra W., van Gorkom H.J., Dekker J.P., and Boekema E.J. Supramolecular organization of photosystem I and light-harvesting complex I in Chlamydomonas reinhardtii. FEBS Lett. 525 (2002) 121-125
26. Bibby T.S., Nield J., and Barber J. Three-dimensional model and characterization of the iron stress-induced CP43′-photosystem I supercomplex isolated from the cyanobacterium Synechocystis PCC 6803. J. Biol. Chem. 276 (2001) 43246-43252
27. Bibby T.S., Mary I., Nield J., Partensky F., and Barber J. Low-light-adapted Prochlorococcus species possess specific antennae for each photosystem. Nature 424 (2003) 1051-1054
28. Bumba L., Prasil O., and Vacha F. Antenna ring around trimeric photosystem I in chlorophyll b containing cyanobacterium Prochlorothrix hollandica. Biochim. Biophys. Acta 1708 (2005) 1-5
29. Marquardt J., Wans S., Rhiel E., Randolf A., and Krumbein W.E. Intron-exon structure and gene copy number of a gene encoding for a membrane-intrinsic light-harvesting polypeptide of the red alga Galdieria sulphuraria. Gene 255 (2000) 257-265
30. Marquardt J., Lutz B., Wans S., Rhiel E., and Krumbein W.E. The gene family coding for the light-harvesting polypeptides of photosystem I of the red alga Galdieria sulphuraria. Photosynth. Res. 68 (2001) 121-130
31. Allen M.B. Studies with Cyanidium caldarium, an anomalously pigmented chlorophyte. Arch. Mikrobiol. 32 (1959) 270-277
32. Bumba L., Havelkova-Dousova H., Husak M., and Vacha F. Structural characterization of photosystem II complex from red alga Porphyridium cruentum retaining extrinsic subunits of the oxygen-evolving complex. Eur. J. Biochem. 271 (2004) 2967-2975
33. Ogawa T., and Vernon L.P. Increased content of cytochromes 554 and 562 in Anabaena variabilis cells grown in the presence of diphenylamine. Biochim. Biophys. Acta 226 (1971) 88-97
34. Frank J., Radermacher M., Penczek P., Zhu J., Li Y.H., Ladjadj M., and Leith A. SPIDER and WEB: processing and visualization of images in 3D electron microscopy and related fields. J. Struct. Biol. 116 (1996) 190-199
35. Van Heel M., and Frank J. Use of multivariate statistics in analyzing the images of biological macromolecules. Ultramicroscopy 6 (1981) 187-194
36. Harauz G., Boekema E.J., and van Heel M. Statistical image analysis of electron micrographs of ribosomal subunits. Methods Enzymol. 164 (1988) 35-49
37. Ohta H., Suzuki T., Ueno M., Okumura A., Yoshihara S., Shen J.R., and Enami I. Extrinsic proteins of photosystem II: an intermediate member of PsbQ protein family in red algal PS II. Eur. J. Biochem. 270 (2003) 4156-4163
38. Boekema E.J., Hankamer B., Bald D., Kruip J., Nield J., Boonstra A.F., Barber J., and Rogner M. Supramolecular structure of the photosystem II complex from green plants and cyanobacteria. Proc. Natl. Acad. Sci. U. S. A. 92 (1995) 175-179
39. Bumba L., Hušák M., and Vácha F. Interaction of PSII-LHCII supercomplexes in adjacent layers of stacked chloroplast thylakoid membranes. Photosynthetica 42 (2004) 193-199
40. Kuhl H., Rogner M., van Breemen J.F., and Boekema E.J. Localization of cyanobacterial photosystem II donor-side subunits by electron microscopy and the supramolecular organization of photosystem II in the thylakoid membrane. Eur. J. Biochem. 266 (1999) 453-459
41. Vacha F., Bumba L., Kaftan D., and Vacha M. Microscopy and single molecule detection in photosynthesis. Micron 36 (2005) 483-502
42. Enami I., Kikuchi S., Fukuda T., Ohta H., and Shen J.-R. Binding and functional properties of four extrinsic proteins of photosystem from a red alga, Cyanidium caldarium, as studied by release- reconstitution experiments. Biochemistry 37 (1998) 2787-2793
43. Kargul J., Nield J., and Barber J. Three-dimensional reconstruction of a light-harvesting complex I-Photosystem I (LHCI-PSI) supercomplex from the green alga Chlamydomonas reinhardtii. J. Biol. Chem. 278 (2003) 16135-16141
44. Chitnis V.P., and Chitnis P.R. PsaL subunit is required for the formation of photosystem I trimers in the cyanobacterium Synechocystis sp. PCC 6803. FEBS Lett. 336 (1993) 330-334
45. Kouřil R., Yeremenko N., D'Haene S., Oostergetel G.T., Matthijs H.C.P., Dekker J.P., and Boekema E.J. Supercomplexes of IsiA and photosystem I in a mutant lacking subunit PsaL. Biochim. Biophys. Acta 1706 (2005) 262-266
46. Domonkos I., Malec P., Sallai A., Kovács L., Itoh K., Shen G., Ughy B., Bogos B., Sakurai I., Kis M., Strzalka K., Wada H., Itoh S., Farkas T., and Gombos Z. Phosphatidylglycerol is essential for oligomerization of photosystem I reaction center. Plant Physiol. 134 (2004) 1471-1478
47. Ben-Shem A., Frolow F., and Nelson N. Evolution of photosystem I-From symmetry through pseudosymmetry to asymmetry. FEBS Lett. 564 (2004) 274-280
48. Scheller H.V., Jensen P.E., Haldrup A., Lunde C., and Knoetzel J. Role of subunits in eukaryotic photosystem I. Biochim. Biophys. Acta 1507 (2001) 41-60
49. Matsuzaki M., Misumi O., Shin-i T., Maruyama S., Takahara M., Miyagishima S., Mori T., Nishida K., Yagisawa F., Nishida K., Yoshida Y., Nishimura Y., Nakao S., Kobayashi T., Momoyama Y., Higashiyama T., Minoda A., Sano M., Nomoto H., Oishi K., Hayashi H., Ohta F., Nishizaka S., Haga S., Miura S., Morishita T., Kabeya Y., Terasawa K., Suzuki Y., Ishii Y., Asakawa S., Takano H., Ohta N., Kuroiwa H., Tanaka K., Shimizu N., Sugano S., Sato N., Nozaki H., Ogasawara N., Kohara Y., and Kuroiwa T. Genome sequence of the ultrasmall unicellular red alga Cyanidioschyzon merolae 10D. Nature 428 (2004) 653-657