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Volumn 12, Issue 5, 2007, Pages 1610-1614

Predicting single nucleotide polymorphisms (SNP) from DNA sequence by support vector machine

Author keywords

SNP; SNP prediction; SVM

Indexed keywords


EID: 34249791169     PISSN: 27686701     EISSN: 27686698     Source Type: Journal    
DOI: 10.2741/2173     Document Type: Article
Times cited : (11)

References (17)
  • 2
    • 2942601555 scopus 로고    scopus 로고
    • Cai Yu-Dong, Xiao-Jun Liu, Xue-biao Xu and Guo-Ping Zhou: Support Vector Machines for predicting protein structural class. BMC Bioinformatics 2:3 (2001)
    • Cai Yu-Dong, Xiao-Jun Liu, Xue-biao Xu and Guo-Ping Zhou: Support Vector Machines for predicting protein structural class. BMC Bioinformatics 2:3 (2001)
  • 3
    • 0033936872 scopus 로고    scopus 로고
    • Parallel genotyping of human SNPs using generic high-density oligonucleotide tag arrays
    • Fan J.B., X. Chen, M.K. Halushka, A. Berno, X. Huang, T. Ryder: Parallel genotyping of human SNPs using generic high-density oligonucleotide tag arrays. Genome Res, 10:853-60 (2000)
    • (2000) Genome Res , vol.10 , pp. 853-860
    • Fan, J.B.1    Chen, X.2    Halushka, M.K.3    Berno, A.4    Huang, X.5    Ryder, T.6
  • 4
    • 0033636139 scopus 로고    scopus 로고
    • Support vector machine classification and validation of cancer tissue samples using microarray expression data
    • Furey T. S., N. Cristianini, N. Duffy, D.W. Bednarski, M. Schummer, and D. Haussler: Support vector machine classification and validation of cancer tissue samples using microarray expression data. Bioinformatics, 16(10):906-914 (2000)
    • (2000) Bioinformatics , vol.16 , Issue.10 , pp. 906-914
    • Furey, T.S.1    Cristianini, N.2    Duffy, N.3    Bednarski, D.W.4    Schummer, M.5    Haussler, D.6
  • 6
    • 0033930834 scopus 로고    scopus 로고
    • Mass spectrometry for genotyping: An emerging tool for molecular medicine
    • Jackson P.E., P.F. Scholl, J.D. Groopman : Mass spectrometry for genotyping: an emerging tool for molecular medicine. Mol Med Today, 6:271-6 (2000)
    • (2000) Mol Med Today , vol.6 , pp. 271-276
    • Jackson, P.E.1    Scholl, P.F.2    Groopman, J.D.3
  • 7
    • 34249786173 scopus 로고    scopus 로고
    • Joachims T.: Making large-scale SVM learning practical. In: scholkppf, B.,Burges, C.,Smola, A. (Eds.), Advances in Kernel Methods-Support Vector Learning. MIT Press, Cambridge, MA (1999)
    • Joachims T.: Making large-scale SVM learning practical. In: scholkppf, B.,Burges, C.,Smola, A. (Eds.), Advances in Kernel Methods-Support Vector Learning. MIT Press, Cambridge, MA (1999)
  • 9
  • 10
    • 0033865806 scopus 로고    scopus 로고
    • A system for specific, high-throughput genotyping by allelespecific primer extension on microarrays
    • Pastinen T., M. Raitio, K. Lindroos, P. Tainola, L. Peltonen, A.C. Syvanen: A system for specific, high-throughput genotyping by allelespecific primer extension on microarrays. Genome Res, 10:1031-42 (2000)
    • (2000) Genome Res , vol.10 , pp. 1031-1042
    • Pastinen, T.1    Raitio, M.2    Lindroos, K.3    Tainola, P.4    Peltonen, L.5    Syvanen, A.C.6
  • 12
    • 85142134781 scopus 로고    scopus 로고
    • Hua Sujun and Zhirong Sun: Support vector machine approach for protein subcellular localization prediction. Bioinformatics, 17(8):721-728 (2001)
    • Hua Sujun and Zhirong Sun: Support vector machine approach for protein subcellular localization prediction. Bioinformatics, 17(8):721-728 (2001)
  • 16
    • 0033670134 scopus 로고    scopus 로고
    • Engineering support vector machine kernels that recognize translation initiation sites
    • Zien A., G. Ratsch, S. Mika, B. Scholkopf, T. Lengauer, K.R. Muller: Engineering support vector machine kernels that recognize translation initiation sites. Biolnformatics, 16(9):799-807 (2000)
    • (2000) Biolnformatics , vol.16 , Issue.9 , pp. 799-807
    • Zien, A.1    Ratsch, G.2    Mika, S.3    Scholkopf, B.4    Lengauer, T.5    Muller, K.R.6
  • 17
    • 0029968822 scopus 로고    scopus 로고
    • Improved nearest-neighbor parameters for predicting DNA duplex stability
    • Santa-Lucia J. Jr., H.T. Allawi, P.A. Seneviratne: Improved nearest-neighbor parameters for predicting DNA duplex stability. Biochemistry, 35, 3555-62 (1996)
    • (1996) Biochemistry , vol.35 , pp. 3555-3562
    • Santa-Lucia Jr., J.1    Allawi, H.T.2    Seneviratne, P.A.3


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.