Role in anaerobiosis of the isoenzymes for Saccharomyces cerevisiae fumarate reductase encoded by OSMI and FRDSI

Yeast

Volumn 24, Issue 5, 2007, Pages 391-401

  Camarasa, Carole ^a   Faucet, Virginie ^a   Dequin, Sylvie ^a  

^a SPO   (France)

Author keywords

Anaerobiosis; Fermentation; Fumarate reductase; Metabolism; Regulation; Saccharomyces cerevisiae; Succinate

Indexed keywords

5,10 METHYLENETETRAHYDROFOLATE REDUCTASE (FADH2); ACETOIN; FLAVINE ADENINE NUCLEOTIDE; FLAVOPROTEIN; FUMARATE REDUCTASE; GLUTAMIC ACID; ISOENZYME; MENADIONE; NITROGEN; OXYGEN; PROTEIN FRDS1; PROTEIN OSM1; REDUCED NICOTINAMIDE ADENINE DINUCLEOTIDE; SACCHAROMYCES CEREVISIAE PROTEIN; SUCCINIC ACID; TRANSCRIPTION FACTOR; TRANSCRIPTION FACTOR ROX1; UNCLASSIFIED DRUG;

ANAEROBIC GROWTH; ARTICLE; CONTROLLED STUDY; ENZYME ACTIVITY; ENZYME METABOLISM; FUNGUS GROWTH; GENE EXPRESSION REGULATION; GENE FUNCTION; GENETIC CODE; GROWTH INHIBITION; GROWTH REGULATION; NONHUMAN; OXIDATION REDUCTION REACTION; PRIORITY JOURNAL; SACCHAROMYCES CEREVISIAE;

ACETOIN; ANAEROBIOSIS; BLOTTING, NORTHERN; FLAVIN-ADENINE DINUCLEOTIDE; GENE EXPRESSION REGULATION, ENZYMOLOGIC; GENE EXPRESSION REGULATION, FUNGAL; ISOENZYMES; MUTATION; OXIDATION-REDUCTION; RNA, FUNGAL; SACCHAROMYCES CEREVISIAE; SUCCINATE DEHYDROGENASE; SUCCINIC ACID; VITAMIN K 3;

SACCHAROMYCES CEREVISIAE;

EID: 34249677220     PISSN: 0749503X     EISSN: 10970061     Source Type: Journal    
DOI: 10.1002/yea.1467     Document Type: Article

References (55)

1. +-dependent glycerol 3-phosphate dehydrogenase encoded by GPD1 and GPD2 have distinct roles in osmoadaptation and redox regulation. EMBO J 16: 2179-2187.
2. Arikawa Y, Enomoto K, Muratsubakin H, Okazaki M. 1998. Soluble fumarate reductase isoenzymes from Saccharomyces cerevisiae are required for anaerobic growth. FEMS Microbiol Lett 165: 111-116.
3. Bafunno V, Giancaspero TA, Brizio C, et al. 2004. Riboflavin uptake and FAD synthesis in Saccharomyces cerevisiae mitochondria: involvement of the Flx1p carrier in FAD export. J Biol Chem 279: 95-102.
4. Bakker BM, Bro C, Kotter P, et al. 2000. The mitochondrial alcohol dehydrogenase Adh3p is involved in a redox shuttle in Saccharomyces cerevisiae. J Bacterial 182: 4730-4737.
5. Balasubramanian B, Lowry CV, Zitomer RS. 1993. The Rox1 repressor of the Saccharomyces cerevisiae hypoxic genes is a specific DNA-binding protein with a high-mobility-group motif. Mol Cell Biol 13: 6071-6078.
6. Bely M, Sablayrolles JM, Barre P. 1990. Automatic detection of assimilable nitrogen deficiencies during alcoholic fermentation in enological conditions. J Ferment Bioeng 70: 246-252.
7. Besteiro S, Biran M, Biteau N, et al. 2002. Succinate secreted by Trypanosoma brucei is produced by a novel and unique glycosomal enzyme, NADH-dependent fumarate reductase. J Biol Chem 277: 38001-38012.
8. Bjorkqvist S, Ansell R, Adler L, Liden G. 1997. Physiological response to anaerobicity of glycerol-3-phosphate dehydrogenase mutants of Saccharomyces cerevisiae. Appl Environ Microbiol 63: 128-132.
9. Boveris A, Hertig CM, Turrens JF. 1986. Fumarate reductase and other mitochondrial activities in Trypanosoma cruzi. Mol Biochem Parasitol 19: 163-169.
10. Bradford MM. 1976. A rapid and sensitive method for the quantitation of microgram quantities of protein utilizing the principle of protein-dye binding. Anal Biochem 72: 248-254.
11. 13CNMR and tricarboxylic acid (TCA) deletion mutant analysis of pathways for succinate formation in Saccharomyces cerevisiae during anaerobic fermentation. Microbiology 149: 2669-2678.
12. Coustou V, Besteiro S, Riviere L, et al. 2005. A mitochondrial NADH-dependent fumarate reductase involved in the production of succinate excreted by procyclic Trypanosoma brucei. J Biol Chem 280: 16559-16570.
13. Dawson RMC, Elliot D, Elliot WH, Jones KM. 1986. Data for Biochemical Research. Clarendon Press: Oxford; 354-355.
14. Deckert J, Perini R, Balasubramanian B, Zitomer RS. 1995. Multiple elements and auto-repression regulate Rox1, a repressor of hypoxic genes in Saccharomyces cerevisiae. Genetics 139: 1149-1158.
15. Dickie P, Weiner JH. 1979. Purification and characterization of membrane-bound fumarate reductase from anaerobically grown Escherichia coli. Can J Biochem 57: 813-821.
16. Dorn M, Andreesen JR, Gottschalk G. 1978. Fermentation of fumarate and L-malate by Clostridium formicoaceticum. J Bacteriol 133: 26-32.
17. Enomoto K, Arikawa Y, Muratsubaki H. 2002. Physiological role of soluble fumarate reductase in redox balancing during anaerobiosis in Saccharomyces cerevisiae. FEMS Microbiol Lett 215: 103-108.
18. Enomoto K, Ohki R, Muratsubaki H. 1996. Cloning and sequencing of the gene encoding the soluble fumarate reductase from Saccharomyces cerevisiae. DNA Res 3: 263-267.
19. Ghisla S, Massey V. 1989. Mechanisms of flavoprotein-catalysed reactions. Eur J Biochem 181: 1-17.
20. Gibbs M, Sokatch JT, Gunsalus IC. 1955. Product labelling of glucose-1-C14 fermentation by homofermentative and heterofermentative lactic acid bacteria. J Bacteriol 70: 572-576.
21. Gonzalez B, Francois J, Renaud M. 1997. A rapid and reliable method for metabolite extraction in yeast using boiling buffered ethanol. Yeast 13: 1347-1355.
22. Gonzalez E, Fernandez MR, Larroy C, Pares X, Biosca JA. 2001. Characterization and functional role of Saccharomyces cerevisiae 2,3-butanediol dehydrogenase. Chem Biol Interact 130-132: 425-34.
23. Gross E, Kastner DB, Kaiser CA, Fass D. 2004. Structure of Ero1p, source of disulfide bonds for oxidative protein folding in the cell. Cell 117: 601-610.
24. Gu Z, Steinmetz LM, Gu X, et al. 2003. Role of duplicate genes in genetic robustness against null mutations. Nature 421: 63-66.
25. Guarente L, Mason T. 1983. Heme regulates transcription of the CYC1 gene of S. cerevisiae via an upstream activation site. Cell 32: 1279-1286.
26. Guldener U, Heck S, Fielder T, Beinhauer J, Hegemann JH. 1996. A new efficient gene disruption cassette for repeated use in budding yeast. Nucleic Acids Res 24: 2519- 2524.
27. Hanhahan D. 1985. Techniques for transformation of E. coli. In DNA Cloning, Glover DM (ed.). IRL Press: Oxford, England; 109-135.
28. Hefti MH, Vervoort J, van Berkel WJ. 2003. Deflavination and reconstitution of flavoproteins. Eur J Biochem 270: 4227-4242.
29. Kellis M, Bitten BW, Lander ES. 2004. Proof and evolutionary analysis of ancient genome duplication in the yeast Saccharomyces cerevisiae. Nature 428: 617-624.
30. Kuepfer L, Sauer U, Blank LM. 2005. Metabolic functions of duplicate genes in Saccharomyces cerevisiae. Genome Res 15: 1421-1430.
31. Kwast KE, Burke PV, Poyton RO. 1998. Oxygen sensing and the transcriptional regulation of oxygen-responsive genes in yeast. J Exp Biol 201: 1177-1195.
32. Lange H, Lisowsky T, Gerber J, et al. 2001. An essential function of the mitochondrial sulfhydryl oxidase Erv1p/ALR in the maturation of cytosolic Fe/S proteins. EMBO Rep 2: 715-720.
33. Lee J, Hofhaus G, Lisowsky T. 2000. Erv1p from Saccharomyces cerevisiae is a FAD-linked sulfhydryl oxidase. FEBS Lett 477: 62-66.
34. Miller JH. 1972. Experiments in Molecular Genetics. Cold Spring Harbor Laboratory Press: Cold Spring Harbor, NY; 352-355.
35. Muratsubaki H. 1987. Regulation of reductive production of succinate under anaerobic conditions in baker's yeast. J Biochem 102: 705-714.
36. Muratsubaki H, Enomoto K. 1998. One of the fumarate reductase isoenzymes from Saccharomyces cerevisiae is encoded by the OSM1 gene. Arch Biochem Biophys 352: 175-181.
37. Muratsubaki H, Katsume T. 1985. Characterization of fumarate reductase from baker's yeast: essential sulfhydryl group for binding FAD. J Biochem 97: 1201-1209.
38. Myers AM, Tzagoloff A, Kinney DM, Lusty CJ. 1986. Yeast shuttle and integrative vectors with multiple cloning sites suitable for construction of lacZ fusions. Gene 45: 299-310.
39. Oura E. 1977. Reaction products of yeast fermentations. Process Biochem 12: 19-21.
40. Pollard MG, Travers KJ, Weissman JS. 1998. Ero1p: a novel and ubiquitous protein with an essential role in oxidative protein folding in the endoplasmic reticulum. Mol Cell 1: 171-182.
41. Remize F, Barnavon L, Dequin S. 2001. Glycerol export and glycerol-3-phosphate dehydrogenase, but not glycerol phosphatase, are rate-limiting for glycerol production in Saccharomyces cerevisiae. Metab Eng 3: 301-312.
42. Remize F, Cambon B, Barnavon L, Dequin S. 2003. Glycerol formation during wine fermentation is mainly linked to Gpd1p and is only partially controlled by the HOG pathway. Yeast 20: 1243-1253.
43. Sambrook J, Fritsch EF, Maniatis T. 1989. Molecular Cloning: A Laboratory Manual, 2nd edn. Cold Spring Harbor Laboratory Press: Cold Spring Harbor, NY.
44. Schiestl RH, Gietz RD. 1989. High efficiency transformation of intact cells using simple stranded nucleic acid as carrier. Curr Genet 16: 339-346.
45. Seoighe C, Wolfe KH. 1999. Yeast genome evolution in the post-genome era. Curr Opin Microbiol 2: 548-554.
46. Sherman F. 1991. Getting started with yeast. In Methods in Enzymology, Guthrie C, Fink GR (eds). Academic Press: New York; 3-21.
47. Singh A, Sherman F. 1978. Deletions of the iso-1-cytochrome c and adjacent genes of yeast: discovery of the OSM1 gene controlling osmotic sensitivity. Genetics 89: 653-665.
48. ter Linde JJ, Liang H, Davis RW, et al. 1999. Genome-wide transcriptional analysis of aerobic and anaerobic chemostat cultures of Saccharomyces cerevisiae. J Bacteriol 181: 7409-7413.
49. Ter Linde JJ, Steensma HY. 2002. A microarray-assisted screen for potential Hap1 and Rox1 target genes in Saccharomyces cerevisiae. Yeast 19: 825-840.
50. Tielens AG. 1994. Energy generation in parasitic helminths. Parasitol Today 10: 346-352.
51. Tielens AG, Van Hellemond JJ. 1998. The electron transport chain in anaerobically functioning eukaryotes. Biochim Biophys Acta 1365: 71-78.
52. 2-dependent reaction cycle of Ero1-mediated oxidative protein folding in the endoplasmic reticulum. Mol Cell 10: 983-994.
53. Tzagoloff A, Jang J, Glerum DM, Wu M. 1996. FLX1 codes for a carrier protein involved in maintaining a proper balance of flavin nucleotides in yeast mitochondria. J Biol Chem 271: 7392-7397.
54. Wolfe K. 2004. Evolutionary genomics: yeasts accelerate beyond BLAST. Curr Biol 14: R392-394.
55. Zadzinski R, Fortuniak A, Bilinski T, Grey M, Bartosz G. 1998. Menadione toxicity in Saccharomyces cerevisiae cells: activation by conjugation with glutathione. Biochem Mol Biol Int 44: 747-759.