Bacillus qingdaonensis sp. nov., a moderately haloalkaliphilic bacterium isolated from a crude sea-salt collected near Qingdao in eastern China

International Journal of Systematic and Evolutionary Microbiology

Volumn 57, Issue 5, 2007, Pages 1143-1147

  Wang, Qian Fu ^a   Li, Wei ^a   Liu, Yan Li ^a   Cao, Hai Hua ^a   Li, Zhao ^a   Guo, Guang Qin ^a  

^a LANZHOU UNIVERSITY   (China)

Author keywords

[No Author keywords available]

Indexed keywords

CYTOSINE; FATTY ACID; GENOMIC DNA; GUANINE; ISOPRENOID; QUINONE DERIVATIVE; RNA 16S; SEA WATER; SODIUM CHLORIDE;

AEROBIC BACTERIUM; ARTICLE; BACILLUS; BACILLUS QINGDAONENSIS; BACILLUS SALARIUS; BACTERIAL GROWTH; BACTERIAL STRAIN; BACTERIUM ISOLATION; CHINA; DNA CONTENT; DNA RECOMBINATION; GRAM POSITIVE BACTERIUM; NUCLEOTIDE SEQUENCE; PH; PHENOTYPE; PHYLOGENY; PRIORITY JOURNAL; RNA SEQUENCE; SALINITY; SEQUENCE HOMOLOGY; TEMPERATURE; TYPE STRAIN;

BACILLUS; BACTERIAL TYPING TECHNIQUES; BASE COMPOSITION; CHINA; DNA, BACTERIAL; DNA, RIBOSOMAL; ENVIRONMENTAL MICROBIOLOGY; FATTY ACIDS; GENES, RRNA; HYDROGEN-ION CONCENTRATION; MICROSCOPY, ELECTRON, TRANSMISSION; MOLECULAR SEQUENCE DATA; NUCLEIC ACID HYBRIDIZATION; PHYLOGENY; QUINONES; RNA, BACTERIAL; RNA, RIBOSOMAL, 16S; SALTS; SEQUENCE ANALYSIS, DNA; SEQUENCE HOMOLOGY, NUCLEIC ACID; TEMPERATURE;

BACILLUS (BACTERIUM); BACILLUS SALARIUS; BACTERIA (MICROORGANISMS); POSIBACTERIA;

EID: 34249042246     PISSN: 14665026     EISSN: None     Source Type: Journal    
DOI: 10.1099/ijs.0.64668-0     Document Type: Article

References (34)

1. Agnew, M. D., Koval, S. F. & Jarrell, K F. (1995). Isolation and characterization of novel alkaliphiles from bauxite-processing waste and description of Bacillus vedderi sp. nov., a new obligate alkaliphile. Syst Appl Microbiol 18, 221-230.
2. Arahal, D. R., Marquez, M. C., Volcani, B. E, Schleifer, K-H. & Ventosa, A. (1999). Bacillus marismortui sp. nov., a new moderately halophilic species from the Dead Sea. Int J Syst Bacteriol 49, 521-530.
3. Bouchotroch, S., Quesada, E, del Moral, A., Llamas, I. & Bejar, V. (2001). Halomonas maura sp. nov., a novel moderately halophilic, exopolysaccharide-producing bacterium. Int J Syst Evol Microbiol 51, 1625-1632.
4. Buchanan, R. G. & Gibbons, N. E. (1974). Bergey's Manual of Determinative Bacteriology, 8th edn, pp. 269-272. Baltimore: Williams & Wilkins.
5. De Ley, L, Cattoir, H. & Reynaerts, A. (1970). Quantitative measurement of DNA hybridization from renaturation rates. Eur J Biochem 12, 133-142.
6. Dong, X. Z. & Cai, M. Y. (2001). Manual of the Identification of General Bacteria. Beijing: Scientific Press.
7. Dussault, H. P. (1955). An improved technique for staining red halophilic bacteria. J Bacteriol 70, 484-485.
8. Felsenstein, J. (1985). Confidence limits on phylogenies: An approach using the bootstrap. Evolution 39, 783-791.
9. Garrity, G. M., Bell, J. A. & Lilburn, T. G. (2004). Taxonomic outline of the prokaryotes. In Bergey's Manual of Systematic Bacteriology, 2nd edn, Release 5.0. New York: Springer. http://141.150.157.80/bergeysoutline/main.htm
10. Hageman, J. H., Shankweiler, G. W, Wall, P. R., Franich, K, McCowan, G. W., Cauble, S. M., Grajeda, J. & Quinones, C. (1984). Single, chemically defined sporulation medium for Bacillus subtilis. growth, sporulation, and extracellular protease production. J Bacteriol 160, 438-441.
11. Horikoshi, K. (1971). Production of alkaline enzymes by alkalophilic microorganisms. Part I. Alkaline protease produced by Bacillus no. 221. Agric Biol Chem 36, 1407-1414.
12. Horikoshi, K, Ikeda, Y. & Nakao, M. (1971). Manufacturing method of cellulase. Japan patent no. 46-76685.
13. Huß, V. A. R., Festl H. & Schleifer, K.-H. (1983). Studies on the spectrophotometric determination of DNA hybridization from renaturation rates. Syst Appl Microbiol 4, 184-192.
14. Jahnke, K.-D. (1992). Basic computer program for evaluation of spectroscopic DNA renaturation data from GILFORD SYSTEM 2600 spectrophotometer on a PC/XT/AT type personal computer. J Microbiol Methods 15, 61-73.
15. Komagata, K & Suzuki, K (1987). Lipid and cell-wall analysis in bacterial systematics. Methods Microbiol 19, 161-208.
16. Kumar, S., Tamura, K, Jakobson, I. B. & Nei, M. (2001). MEGA2: Molecular evolutionary genetics analysis software. Bioinformatics 17, 1244-1245.
17. Kumar, S., Tamura, K., Jakobson, I. B. & Nei, M. (2004). MEGA3: Integrated software for molecular evolutionary genetics analysis and sequence alignment. Brief Bioinform 5, 150-163.
18. Lim, J.-M., Jeon, C.-O., Lee, S.-M., Lee, J.-C, Xu, L.-H., Jiang, C.-L. & Kim, C.A. (2006). Bacillus salarius sp. nov., a halophilic, spore-forming bacterium isolated from a salt lake in China. Int J Syst Evol Microbiol 56, 373-377.
19. Mancineill, R. L. & Hachstein, L. I. (1986). The occurrence of denitrification in extremely halophilic bacteria. FEMS Microbiol Lett 35, 55-58.
20. Margesin, R. & Schinner, F. (2001). Potential of halotolerant and halophilic microorganisms for biotechnology. Extremophiles 5, 73-83.
21. Miller, L. T. (1982). Single derivatization method for routine analysis of bacterial whole-cell, fatty acid methyl esters, including hydroxyl acids. J Clin Microbiol 16, 584-586.
22. Nielsen, P, Rainey, F. A., Outtrup, H., Priest, F. G. & Fritze, D. (1994). Comparative 16S rDNA sequence analysis of some alkaliphilic bacilli and the establishment of a sixth rRNA group within the genus Bacillus. FEMS Microbiol Lett 117, 61-66.
23. Nielsen, P, Fritze, D. & Priest F. G. (1995). Phenetic diversity of alkaliphilic Bacillus strains: Proposal for nine new species. Microbiology 141, 1745-1761.
24. Oren, A. & Trüper, H. G. (1990). Anaerobic growth of halophilic archaeobacteria by reduction of dimethylsufoxide and trimethylamine N-oxide. FEMS Microbiol Lett 70, 33-36.
25. Oren, A., Ventosa, A. & Grant W. D. (1997). Proposed minimal standards for description of new taxa in the order Halobacteriales. Int J Syst Bacteriol 47, 233-238.
26. Reddy, G. S. N, Raghavan, P. U. M., Sarita, N. B., Prakash, J. S. S., Narayana, N., Daniel, D. & Shivaji, S. (2003). Halomonas glaciei sp. nov. isolated from fast ice of Adehe Land, Antarctica. Extremophiles 7, 55-61.
27. Romano, L, Lama, L., Nicolaus, B., Gambacorta, A. & Giordano, A. (2005). Bacillus saliphilus sp. nov., isolated from a mineral pool in Campania, Italy. Int J Syst Evol Microbiol 55, 159-163.
28. Saitou, N. & Nei, M. (1987). The neighbor-joining methoch a new method for reconstructing phylogenetic trees. Mol Biol Evol 4, 406-425.
29. Seghal, S. N. & Gibbons, N. E. (1960). Effect of some metal ions on the growth of Halobacterium cutirubrum. Can J Microbiol 6, 165-169.
30. Sly, L. I., Blackall, L. L., Kraat P. C., Tian-Shen, T. & Sangkhobol, V. (1986). The use of second derivative plots for the determination of mol% guanine plus cytosine of DNA by the thermal denaturation method. J Microbiol Methods 5, 139-156.
31. Thompson, J. D, Gibson, T. J, Plewniak, K, Jeanmougin, F. & Higgins, D. G. (1997). The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Res 25, 4876-4882.
32. Ventosa, A., Garcia, M. T., Kamekura, M., Onishi, H. & Ruiz-Berraquero, F. (1989). Bacillus halophilus sp. nov., a moderately halophilic Bacillus species. Syst Appl Microbiol 12, 162-165.
33. Yamamoto, M., Tanaka, Y. & Horikoshi, K (1972). Alkaline amylases of alkalophilic bacteria. Agric Biol Chem 36, 1819-1823.
34. Yoon, J.-H., Kim, I.-G., Kang, K-H., Oh, T.-K. & Park Y.-H. (2004). Bacillus hwajinpoensis sp. nov. and an unnamed Bacillus genomospecies, novel members of Bacillus rRNA group 6 isolated from sea water of the East Sea and the Yellow Sea in Korea. Int J Syst Evol Microbiol 54, 803-808.