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Volumn 11, Issue 3, 2007, Pages 463-467

Chitinase gene diversity at a deep sea station of the east Pacific nodule province

Author keywords

chiA; Chitinase; Deep sea; Diversity; Pacific nodule province

Indexed keywords

CHITINASE; PRIMER DNA;

EID: 34248339536     PISSN: 14310651     EISSN: 14334909     Source Type: Journal    
DOI: 10.1007/s00792-006-0057-7     Document Type: Article
Times cited : (6)

References (27)
  • 2
    • 17144458835 scopus 로고
    • Significance of bacterial ectoenzymes in aquatic environments
    • Chrost R (1992) Significance of bacterial ectoenzymes in aquatic environments. Hydrobiologia 243:61-70
    • (1992) Hydrobiologia , vol.243 , pp. 61-70
    • Chrost, R.1
  • 4
    • 0034010276 scopus 로고    scopus 로고
    • Selected chitinase genes in cultured and uncultured marine bacteria in the alpha- and gamma-subclasses of the proteobacteria
    • Cottrell MT, Wood DN, Yu L, Kirchman DL (2000) Selected chitinase genes in cultured and uncultured marine bacteria in the alpha- and gamma-subclasses of the proteobacteria. Appl Environ Microbiol 66:1195-1201
    • (2000) Appl Environ Microbiol , vol.66 , pp. 1195-1201
    • Cottrell, M.T.1    Wood, D.N.2    Yu, L.3    Kirchman, D.L.4
  • 5
    • 0003133857 scopus 로고
    • The ecology of chitin degradation
    • Gooday G (1990) The ecology of chitin degradation. Adv Microb Ecol 11:387-430
    • (1990) Adv Microb Ecol , vol.11 , pp. 387-430
    • Gooday, G.1
  • 6
    • 0026055308 scopus 로고
    • A classification of glycosyl hydrolases based on amino acid sequence similarities
    • Henrissat B (1991) A classification of glycosyl hydrolases based on amino acid sequence similarities. Biochem J 280(Pt 2):309-316
    • (1991) Biochem J , vol.280 , Issue.PART 2 , pp. 309-316
    • Henrissat, B.1
  • 7
    • 0027225980 scopus 로고
    • New families in the classification of glycosyl hydrolases based on amino acid sequence similarities
    • Henrissat B, Bairoch A (1993) New families in the classification of glycosyl hydrolases based on amino acid sequence similarities. Biochem J 293(Pt 3):781-788
    • (1993) Biochem J , vol.293 , Issue.PART 3 , pp. 781-788
    • Henrissat, B.1    Bairoch, A.2
  • 8
    • 18444388290 scopus 로고    scopus 로고
    • Investigation of the microbial ecology of intertidal hot springs by using diversity analysis of 16S rRNA and chitinase genes
    • Hobel CF, Marteinsson VT, Hreggvidsson GO, Kristjansson JK (2005) Investigation of the microbial ecology of intertidal hot springs by using diversity analysis of 16S rRNA and chitinase genes. Appl Environ Microbiol 71:2771-2776
    • (2005) Appl Environ Microbiol , vol.71 , pp. 2771-2776
    • Hobel, C.F.1    Marteinsson, V.T.2    Hreggvidsson, G.O.3    Kristjansson, J.K.4
  • 10
    • 0032714186 scopus 로고    scopus 로고
    • Physiological aspects of chitin catabolism in marine bacteria
    • Keyhani NO, Roseman S (1999) Physiological aspects of chitin catabolism in marine bacteria. Biochim Biophys Acta 1473:108-122
    • (1999) Biochim Biophys Acta , vol.1473 , pp. 108-122
    • Keyhani, N.O.1    Roseman, S.2
  • 11
    • 0033538863 scopus 로고    scopus 로고
    • Hydrolysisi and mineralization of chitin in the delaware estuary
    • Kirchman DL, White J (1999) Hydrolysisi and mineralization of chitin in the delaware estuary. Aquat Microb Ecol 18:187-196
    • (1999) Aquat Microb Ecol , vol.18 , pp. 187-196
    • Kirchman, D.L.1    White, J.2
  • 12
    • 0035157833 scopus 로고    scopus 로고
    • Assessment of chitin decomposer diversity within an upland grassland
    • Krsek M, Wellington EM (2001) Assessment of chitin decomposer diversity within an upland grassland. Antonie Van Leeuwenhoek 79:261-267
    • (2001) Antonie Van Leeuwenhoek , vol.79 , pp. 261-267
    • Krsek, M.1    Wellington, E.M.2
  • 13
    • 10444221885 scopus 로고    scopus 로고
    • Chitinase gene sequences retrieved from diverse aquatic habitats reveal environment-specific distributions
    • LeCleir GR, Buchan A, Hollibaugh JT (2004) Chitinase gene sequences retrieved from diverse aquatic habitats reveal environment-specific distributions. Appl Environ Microbiol 70:6977-6983
    • (2004) Appl Environ Microbiol , vol.70 , pp. 6977-6983
    • LeCleir, G.R.1    Buchan, A.2    Hollibaugh, J.T.3
  • 15
    • 0035949643 scopus 로고    scopus 로고
    • High resolution structural analyses of mutant chitinase A complexes with substrates provide new insight into the mechanism of catalysis
    • Papanikolau Y, Prag G, Tavlas G, Vorgias CE, Oppenheim AB, Petratos K (2001) High resolution structural analyses of mutant chitinase A complexes with substrates provide new insight into the mechanism of catalysis. Biochemistry 40:11338-11343
    • (2001) Biochemistry , vol.40 , pp. 11338-11343
    • Papanikolau, Y.1    Prag, G.2    Tavlas, G.3    Vorgias, C.E.4    Oppenheim, A.B.5    Petratos, K.6
  • 16
    • 1542741397 scopus 로고    scopus 로고
    • Chitin biodegradation in marine environments
    • Poulicek M, Gaill F, Goffinet G (1998) Chitin biodegradation in marine environments. ACS Sym Ser 707:163-210
    • (1998) ACS Sym Ser , vol.707 , pp. 163-210
    • Poulicek, M.1    Gaill, F.2    Goffinet, G.3
  • 18
    • 0030925920 scopus 로고    scopus 로고
    • Pfam: A comprehensive database of protein domain families based on seed alignments
    • Sonnhammer EL, Eddy SR, Durbin R (1997) Pfam: a comprehensive database of protein domain families based on seed alignments. Proteins 28:405-420
    • (1997) Proteins , vol.28 , pp. 405-420
    • Sonnhammer, E.L.1    Eddy, S.R.2    Durbin, R.3
  • 19
    • 0033229842 scopus 로고    scopus 로고
    • The third chitinase gene (chiC) of Serratia marcescens 2170 and the relationship of its product to other bacterial chitinases
    • Suzuki K, Taiyoji M, Sugawara N, Nikaidou N, Henrissat B, Watanabe T (1999) The third chitinase gene (chiC) of Serratia marcescens 2170 and the relationship of its product to other bacterial chitinases. Biochem J 343(Pt 3):587-596
    • (1999) Biochem J , vol.343 , Issue.PART 3 , pp. 587-596
    • Suzuki, K.1    Taiyoji, M.2    Sugawara, N.3    Nikaidou, N.4    Henrissat, B.5    Watanabe, T.6
  • 20
    • 0037318124 scopus 로고    scopus 로고
    • Characterization of chitinase genes from an alkaliphilic actinomycete, Nocardiopsis prasina OPC-131
    • Tsujibo H, Kubota T, Yamamoto M, Miyamoto K, Inamori Y (2003) Characterization of chitinase genes from an alkaliphilic actinomycete, Nocardiopsis prasina OPC-131. Appl Environ Microbiol 69:894-900
    • (2003) Appl Environ Microbiol , vol.69 , pp. 894-900
    • Tsujibo, H.1    Kubota, T.2    Yamamoto, M.3    Miyamoto, K.4    Inamori, Y.5
  • 21
    • 0036135173 scopus 로고    scopus 로고
    • Identification and characterization of the gene cluster involved in chitin degradation in a marine bacterium, Alteromonas sp. strain O-7
    • Tsujibo H, Orikoshi H, Baba N, Miyahara M, Miyamoto K, Yasuda M, Inamori Y (2002) Identification and characterization of the gene cluster involved in chitin degradation in a marine bacterium, Alteromonas sp. strain O-7. Appl Environ Microbiol 68:263-270
    • (2002) Appl Environ Microbiol , vol.68 , pp. 263-270
    • Tsujibo, H.1    Orikoshi, H.2    Baba, N.3    Miyahara, M.4    Miyamoto, K.5    Yasuda, M.6    Inamori, Y.7
  • 22
    • 0027216435 scopus 로고
    • Identification of glutamic acid-204 and aspartic acid-200 in chitinase A1 of Bacillus circulans WL12 as essential residues for chitinase activity
    • Watanabe T, Kobori K, Miyashita K, Fujii T, Sakai H, Uchida M, Tanaka H (1993) Identification of glutamic acid-204 and aspartic acid-200 in chitinase A1 of Bacillus circulans WL12 as essential residues for chitinase activity. J Biol Chem 268:18567-18572
    • (1993) J Biol Chem , vol.268 , pp. 18567-18572
    • Watanabe, T.1    Kobori, K.2    Miyashita, K.3    Fujii, T.4    Sakai, H.5    Uchida, M.6    Tanaka, H.7
  • 23
    • 0034450921 scopus 로고    scopus 로고
    • Molecular detection of bacterial and streptomycete chitinases in the environment
    • Williamson N, Brian P, Wellington EM (2000) Molecular detection of bacterial and streptomycete chitinases in the environment. Antonie Van Leeuwenhoek 78:315-321
    • (2000) Antonie Van Leeuwenhoek , vol.78 , pp. 315-321
    • Williamson, N.1    Brian, P.2    Wellington, E.M.3
  • 26
    • 29144451923 scopus 로고    scopus 로고
    • Microbial diversity at a deep-sea station of the Pacific nodule province
    • Xu M, Wang P, Wang F, Xiao X (2005) Microbial diversity at a deep-sea station of the Pacific nodule province. Biodivers Conserv 14:3363-3380
    • (2005) Biodivers Conserv , vol.14 , pp. 3363-3380
    • Xu, M.1    Wang, P.2    Wang, F.3    Xiao, X.4
  • 27
    • 33645241942 scopus 로고    scopus 로고
    • Bacterial community in sediment from the Western Pacific "Warm Pool" and its relationship to environment
    • Zeng R, Zhao J, Zhang R, Lin N (2005) Bacterial community in sediment from the Western Pacific "Warm Pool" and its relationship to environment. Sci China Ser D 48:282-290
    • (2005) Sci China Ser D , vol.48 , pp. 282-290
    • Zeng, R.1    Zhao, J.2    Zhang, R.3    Lin, N.4


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.